For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. marinum M MMAR_2016 (-)

annotation: hypothetical protein MMAR_2016
coordinates: 2434725 - 2435204
length: 159

SETRVAPHSVRYRERLWVPWWWWPLGFALAGLIAFEVNLGIAALADWLPYAILFTVAAAALLWLGRVEIR
VIAGADGEVELWAGEAHLPVTVIARSAEVPRTAKSAALGRQLDPAAYVLHRAWVGPMVLLVLDDPDDPTP
YWLVSCRHPERVLSALRS*
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. marinum MMMAR_2016--100% (159)hypothetical protein MMAR_2016

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb2717-1e-7885.71% (161) alanine rich transmembrane protein
M. gilvum PYR-GCKMflv_3934-8e-6266.04% (159) putative alanine rich transmembrane protein
M. tuberculosis H37RvRv2698-1e-7885.71% (161) alanine rich transmembrane protein
M. leprae Br4923MLBr_01027-1e-7178.88% (161) hypothetical protein MLBr_01027
M. abscessus ATCC 19977MAB_3004-2e-5765.77% (149) hypothetical protein MAB_3004
M. avium 104MAV_3590-4e-6679.17% (144) hypothetical protein MAV_3590
M. smegmatis MC2 155MSMEG_2764-1e-6366.04% (159) alanine rich transmembrane protein
M. thermoresistible (build 8)TH_1191-8e-5568.35% (139) PROBABLE CONSERVED ALANINE RICH TRANSMEMBRANE PROTEIN
M. ulcerans Agy99MUL_3336-3e-92100.00% (159) hypothetical protein MUL_3336
M. vanbaalenii PYR-1Mvan_2466-3e-6367.92% (159) putative alanine rich transmembrane protein

CLUSTAL 2.0.9 multiple sequence alignment


Mflv_3934|M.gilvum_PYR-GCK          MSDTRATARTVRYRERLWVPLWWWLPGLGLAALIALEVDQGVRAVPDWLP
Mvan_2466|M.vanbaalenii_PYR-1       MSDTRATAQTVRYRERLTVPLWWWLPGLGVAALIALEINQGIRALPGWLP
TH_1191|M.thermoresistible__bu      ------------------VSWWWWPPGLGLAALMAATVTQAAPELPVWLP
MSMEG_2764|M.smegmatis_MC2_155      MSDTRATTQTTRYRERLWVPWWWIPIAAGFAALIAFEVVMGVSSIPAWVP
MMAR_2016|M.marinum_M               MSETRVAPHSVRYRERLWVPWWWWPLGFALAGLIAFEVNLGIAALADWLP
MUL_3336|M.ulcerans_Agy99           MSETRVAPHSVRYRERLWVPWWWWPLGFALAGLIAFEVNLGIAALADWLP
Mb2717|M.bovis_AF2122/97            MSGTRLAPHSVRYRERLWVPWWWWPLAFALAALIAFEVNLGVAALPDWVP
Rv2698|M.tuberculosis_H37Rv         MSGTRLAPHSVRYRERLWVPWWWWPLAFALAALIAFEVNLGVAALPDWVP
MLBr_01027|M.leprae_Br4923          MSGTPVAPHNVRYRERLWVPWWWWPLAFALASLIAFEVNLSGATLPSWLP
MAV_3590|M.avium_104                ----------------MWVPWWWWPPAFALAGIIAFEFNMGVTRQSSWWP
MAB_3004|M.abscessus_ATCC_1997      MMASPSNTTDIRYLERLWVPWWWALPGFGAATLLGLEVNQGLRQLPSWVP
                                                      *. **   . . * ::.  .  .    . * *

Mflv_3934|M.gilvum_PYR-GCK          YAVLLPVAAVVLIGLGRTEVQVVGD-EGNT--ELWVGNAHLPASVVTRSA
Mvan_2466|M.vanbaalenii_PYR-1       YAVLLPVAAVVLLGLGRTELRVVTAADGQT--ELWVGNAHLPTAVISRTA
TH_1191|M.thermoresistible__bu      YAVLTAVAAVVLLWLGRFEVRVVGTGPDDT--ELWVGDAHLPVSVISRMA
MSMEG_2764|M.smegmatis_MC2_155      YAVLLPVAAAVLLWFSKTEVRVVSSPDGDN--ELWVNAAHLPRSVIARSA
MMAR_2016|M.marinum_M               YAILFTVAAAALLWLGRVEIRVIAG-ADGE-VELWAGEAHLPVTVIARSA
MUL_3336|M.ulcerans_Agy99           YAILFTVAAAALLWLGRVEIRVIAG-ADGE-VELWAGEAHLPVTVIARSA
Mb2717|M.bovis_AF2122/97            FATLFTVAAGTLLWLGRVEIRVTAGSADGAGVKLWAGPAHLPVAVIARSA
Rv2698|M.tuberculosis_H37Rv         FATLFTVAAGTLLWLGRVEIRVTAGSADGAGVKLWAGPAHLPVAVIARSA
MLBr_01027|M.leprae_Br4923          ----FAVAAGTLLWLGRVEIQVIADAPLGGSVELWAGNAHLPITAIAQSA
MAV_3590|M.avium_104                YAALFAVAAAALLWLGRIEVRVTANPAVPGEVELWAGPAHLPVTAIARSA
MAB_3004|M.abscessus_ATCC_1997      YPILFAIVAGVLLWFSRIRVEVAAGPDGTP--ELRAGSAHLPVSVIAKSA
                                         .:.* .*: :.: .:.*          :* .. **** :.::: *

Mflv_3934|M.gilvum_PYR-GCK          VVPRSAKSAALGRQLDPAAYVVHKTWVGPLVLLVLDDPDDPTPYWLISAR
Mvan_2466|M.vanbaalenii_PYR-1       EVPRSAKSAALGRQLDPAAYVVHRGWVGPMALLVLDDPDDPTPYWLISTK
TH_1191|M.thermoresistible__bu      EVPASAKSAALGRQLDPAAYVVHRPWVGPMVLVVLDDPDDPTPYWLVSTR
MSMEG_2764|M.smegmatis_MC2_155      EVPKSAKSAALGRQLDPAAYVVHRAWVGPMVLVVLDDPDDPTPYWLVSTR
MMAR_2016|M.marinum_M               EVPRTAKSAALGRQLDPAAYVLHRAWVGPMVLLVLDDPDDPTPYWLVSCR
MUL_3336|M.ulcerans_Agy99           EVPRTAKSAALGRQLDPAAYVLHRAWVGPMVLLVLDDPDDPTPYWLVSCR
Mb2717|M.bovis_AF2122/97            EIPATAKSAALGRQLDPAAYVLHRAWVGPMVLVVLDDPNDPTPYWLVSCR
Rv2698|M.tuberculosis_H37Rv         EIPATAKSAALGRQLDPAAYVLHRAWVGPMVLVVLDDPNDPTPYWLVSCR
MLBr_01027|M.leprae_Br4923          AISRSAKSAALGRQLDPAAYVLHRAWVGPMILVVLDDPDDPTPYWLVSCR
MAV_3590|M.avium_104                PVAPSAKSAALGRQLDPAAYVLHRAWVGPMILVVLDDPDDPTPYWLVSCR
MAB_3004|M.abscessus_ATCC_1997      AIPATAKSAALGRQLDPAAFVVHRAWIGPMVLVVLNDADDPTPYWLVSSR
                                     :. :**************:*:*: *:**: *:**:*.:*******:* :

Mflv_3934|M.gilvum_PYR-GCK          HPDKVLAALNS---
Mvan_2466|M.vanbaalenii_PYR-1       HPDKVLAALRA---
TH_1191|M.thermoresistible__bu      HPDRVLAALGGDSG
MSMEG_2764|M.smegmatis_MC2_155      HPDRLLAALNA---
MMAR_2016|M.marinum_M               HPERVLSALRS---
MUL_3336|M.ulcerans_Agy99           HPERVLSALRS---
Mb2717|M.bovis_AF2122/97            HPERVLSALRS---
Rv2698|M.tuberculosis_H37Rv         HPERVLSALRS---
MLBr_01027|M.leprae_Br4923          HPERVLSALRS---
MAV_3590|M.avium_104                HPERVLSALRG---
MAB_3004|M.abscessus_ATCC_1997      HPDRLLAALRS---
                                    **:::*:** .