For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MSASDGALRAWGYLSRVAEPPCAELAALVQRVGPVEAAERIRRGQVDGELARLTRARCEIDRAAADLEQL ARRGGRLITPDDDEWPVVAFTAFSGSAIRAKGNGGAPMALWVQGPARLDQVVQRAAALVGTRAATAYGEH MAADLAAGLVERDVAVISGGAYGIDGAAHRAVLIAEGTTVAVLAGGIDIPYPTGHSALLHRIGQHGLLVT EYPPGVRPARHRFLTRNRLVAALGGAAVVVEAGLRSGAANTAAWARALGRIVAAVPGPATSSASAGCHVL LRNGAQLITRADEIVELVGRIGELSLEQSRPTSVLDGLSQSESQVYEALPGRGAMSVDEIAVASGLVAEQ VMGRLAILEVAGLAERDGGRWRLVRAGRARPAAEGVRARLV
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. marinum M | MMAR_1814 | - | - | 100% (391) | hypothetical protein MMAR_1814 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb2920c | - | 1e-165 | 75.71% (387) | hypothetical protein Mb2920c |
| M. gilvum PYR-GCK | Mflv_4138 | - | 1e-127 | 62.60% (377) | DNA protecting protein DprA |
| M. tuberculosis H37Rv | Rv2896c | - | 1e-165 | 75.71% (387) | hypothetical protein Rv2896c |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_3212c | - | 1e-119 | 59.03% (371) | hypothetical protein MAB_3212c |
| M. avium 104 | MAV_3749 | - | 1e-156 | 71.65% (388) | smf family protein |
| M. smegmatis MC2 155 | - | - | - | - | - |
| M. thermoresistible (build 8) | TH_0843 | - | 1e-133 | 64.34% (373) | CONSERVED HYPOTHETICAL PROTEIN |
| M. ulcerans Agy99 | MUL_2062 | - | 0.0 | 98.72% (391) | hypothetical protein MUL_2062 |
| M. vanbaalenii PYR-1 | Mvan_2204 | - | 1e-132 | 65.77% (371) | transcriptional regulator, TrmB |
CLUSTAL 2.0.9 multiple sequence alignment
Mflv_4138|M.gilvum_PYR-GCK MDVMDEATRRAWAYVSRVAEPPHRLLSELVATEGVVAAAERIRRRDIDPK
TH_0843|M.thermoresistible__bu ---MTDQTARAWAYLARVAEPPCPAVAGLVDRVGPVDAAELIRRGDVDDR
MMAR_1814|M.marinum_M MSASDG-ALRAWGYLSRVAEPPCAELAALVQRVGPVEAAERIRRGQVDGE
MUL_2062|M.ulcerans_Agy99 MSASDS-ALRAWGYLSRVAEPPCAELAALVQRVGPVEAAERIRRGQVDGE
Mb2920c|M.bovis_AF2122/97 --MIDP-TARAWAYLSRVAEPPCAQLAALVRCVGPVEAADRVRRGQVGNE
Rv2896c|M.tuberculosis_H37Rv --MIDP-TARAWAYLSRVAEPPCAQLAALVRCVGPVEAADRVRRGQVGNE
MAV_3749|M.avium_104 MTAADPRALRAWAYLSRVAEPPCPGLGALVRRVGPVEAAERVRRAAVDDA
Mvan_2204|M.vanbaalenii_PYR-1 ---MDETTRRAWAYLSRVAEPPCAALAALVAEAGAVDAAERVRRGAVSAD
MAB_3212c|M.abscessus_ATCC_199 ---MSS-ATADWAYLSRVSEAPSAELAAMVSVFGVRETAARVRRLDVPDQ
: *.*::**:*.* :. :* * :* :** :
Mflv_4138|M.gilvum_PYR-GCK LLRATEARYDLDCARDDLEVLDRMGGRLLTDTDEEWPHLAFAAFRGVDHA
TH_0843|M.thermoresistible__bu LAKRTEARRDWDCAATDLELMARLGGRLVTAADPDWPVLAFTAFGGADRS
MMAR_1814|M.marinum_M LARLTRARCEIDRAAADLEQLARRGGRLITPDDDEWPVVAFTAFSGSAIR
MUL_2062|M.ulcerans_Agy99 LARLTRARCEIDRAAADLEQRARRGGRLITPDDDEWPVVAFTAFSGSAIR
Mb2920c|M.bovis_AF2122/97 LAQHTGARRGIDRAADDLELLMRRGGRLITPDDDEWPVLAFAAFSGAGAR
Rv2896c|M.tuberculosis_H37Rv LAQHTGARREIDRAADDLELLMRRGGRLITPDDDEWPVLAFAAFSGAGAR
MAV_3749|M.avium_104 LAKHTEARREIDRAAADLELIARRGGRLVTPDDDEWPVLAFAAFGAATPR
Mvan_2204|M.vanbaalenii_PYR-1 LRARVESRRDIDCAAADLDLIDRRGGRLITPDDDDWPTWVLNDFGRKDPP
MAB_3212c|M.abscessus_ATCC_199 VRAVVRARHDVDRSREDLEILSRLQGRLVTPDDAEWPHWQFQAFASVDTK
: . :* * : **: * ***:* * :** : *
Mflv_4138|M.gilvum_PYR-GCK RRPQG--RPPLVLWVLGPLLLCDVAERSAAIVGTRAATSYGEYVAADLAA
TH_0843|M.thermoresistible__bu HRPDG--HPPLALWVIGELTLDAVAGRSAAIVGTRAASSYGEHVAADLAT
MMAR_1814|M.marinum_M AKGNG--GAPMALWVQGPARLDQVVQRAAALVGTRAATAYGEHMAADLAA
MUL_2062|M.ulcerans_Agy99 AKGNG--GAPMALWVQGPARLDQVVQRTAALVGTRAATAYGEHMAADLAA
Mb2920c|M.bovis_AF2122/97 ARPCG--HSPLVLWALGPARLDEVAPRAAAVVGTRAATAYGEHVAADLAA
Rv2896c|M.tuberculosis_H37Rv ARPCG--HSPLVLWALGPARLDEVAPRAAAVVGTRAATAYGEHVAADLAA
MAV_3749|M.avium_104 PPGTAPMLAPLVLWAQGPARLDEVAHRAAAVVGTRAATAYGEQVAGDLVA
Mvan_2204|M.vanbaalenii_PYR-1 VAEDY---PPLVLWVLGQENLADVAARAAAIVGTRACTAYGEHVTADLVA
MAB_3212c|M.abscessus_ATCC_199 RMPNG--RMPLALWVVGERSLAEVTSRAAALVGTRACSGYGEHVTAELAA
*:.**. * * *. *:**:*****.:.*** ::.:*.:
Mflv_4138|M.gilvum_PYR-GCK GLVERDFAVVSGGAYGIDGAAHRATLAADGDTVAVLAAGLDVPYPAGHSA
TH_0843|M.thermoresistible__bu GLAARDVAVISGGAYGIDGVAHRAALAAEGLTVAVLAGGVDVRYPAGHAG
MMAR_1814|M.marinum_M GLVERDVAVISGGAYGIDGAAHRAVLIAEGTTVAVLAGGIDIPYPTGHSA
MUL_2062|M.ulcerans_Agy99 GLVERDVAVISGGAYGIDGAAHRAVLIAEGTTVAVLAGGIDIPYPTGHSA
Mb2920c|M.bovis_AF2122/97 GLAERDVAVVSGGAYGIDGAAHRAALDSEGITVAVLAGGFDIPYPAGHSA
Rv2896c|M.tuberculosis_H37Rv GLAERDVSVVSGGAYGIDGAAHRAALDSEGITVAVLAGGFDIPYPAGHSA
MAV_3749|M.avium_104 GLVQRDVAVVSGGAYGIDGAAHRAALDCDGVTVAVLAGGLDVAYPSGHSA
Mvan_2204|M.vanbaalenii_PYR-1 GLVERDVAVVSGGAFGIDGAAHRAALASDGVTVAVLAGGIDVPYPAGHSA
MAB_3212c|M.abscessus_ATCC_199 GLTAREVAVVSGAAFGIDGVAHRATLACDGVTVAVLAGGVDVPYPAGHSG
**. *:.:*:**.*:****.****.* .:* ******.*.*: **:**:.
Mflv_4138|M.gilvum_PYR-GCK LLHRVGKHGLLVSEYPPGTRPTRRQFLTRNRLVAALGRATVVIEAGVRSG
TH_0843|M.thermoresistible__bu LLQRIAEHGLLISEYPPGTRPSRRRFLTRNRLVAALSGATVVVEAGIRSG
MMAR_1814|M.marinum_M LLHRIGQHGLLVTEYPPGVRPARHRFLTRNRLVAALGGAAVVVEAGLRSG
MUL_2062|M.ulcerans_Agy99 LLHWIGQHGLLVTEYPPGVRPARHRFLTRNRLVAALGGAAVVVEAGLRSG
Mb2920c|M.bovis_AF2122/97 LLHRIAQHGVLFTEYPPGVRPARHRFLTRNRLVAAVARAAVVVEAGLRSG
Rv2896c|M.tuberculosis_H37Rv LLHRIAQHGVLFTEYPPGVRPARHRFLTRNRLVAAVARAAVVVEAGLRSG
MAV_3749|M.avium_104 LLHRIGQHGLLFTEYAPGVRPARYRFLTRNRLVAAMAGATVVVEAGLRSG
Mvan_2204|M.vanbaalenii_PYR-1 LLHRVSGSGLLVSEYPPGVRPARYRFLTRNRLVAALSGATVVVEAGLRSG
MAB_3212c|M.abscessus_ATCC_199 LLYRIARHGLVVSEYPPGVRPARHRFLTRNRLVAALSGATVVVEAGARSG
** :. *::.:**.**.**:* :**********:. *:**:*** ***
Mflv_4138|M.gilvum_PYR-GCK AANTAGWADALGRQVCAVPGPITSASSVGCHELLKRDGVTLVTRAADIVE
TH_0843|M.thermoresistible__bu AANTAAWAETLGRPVGAVPGPVTSATSVGCHVLLRERAATVITRAEEVVE
MMAR_1814|M.marinum_M AANTAAWARALGRIVAAVPGPATSSASAGCHVLLR-NGAQLITRADEIVE
MUL_2062|M.ulcerans_Agy99 AANTAAWARALGRIVAAVPGPATSSASAGCHVLLR-NGAQLITRADEIVE
Mb2920c|M.bovis_AF2122/97 AANTAAWARALGRVVAAVPGPVTSSASAGCHTLLR-HGAELVTRADDIVE
Rv2896c|M.tuberculosis_H37Rv AANTAAWARALGRVVAAVPGPVTSSASAGCHTLLR-HGAELVTRADDIVE
MAV_3749|M.avium_104 AANTAAWARALGRVVAAVPGPVTSSASAGCHALLR-NGAELITRAEHVVE
Mvan_2204|M.vanbaalenii_PYR-1 AANTAGWSRSLGRGVCAVPGPVTSAASAGCHELLRREGTVLVTRAQEVVE
MAB_3212c|M.abscessus_ATCC_199 AANTAAWARILGRPVGAVPGPITSAASVGTHVEIAERGAQLVVCAQDVVA
*****.*: *** * ***** **::*.* * : .. ::. * .:*
Mflv_4138|M.gilvum_PYR-GCK LVGRSGEFAPDLDRPTTGLDDLDDVELAVFDALPGRGMSTVDEIAVTAGL
TH_0843|M.thermoresistible__bu LVGRCGELAPDLPRPSSPLDDLTDAELLVYEALPARAARTVDQIAVACGM
MMAR_1814|M.marinum_M LVGRIGELSLEQSRPTSVLDGLSQSESQVYEALPGRGAMSVDEIAVASGL
MUL_2062|M.ulcerans_Agy99 LVGRIGELSLEQSRPTSVLDGLSQSESQVYEALPGRGAMSVDEIAVASGL
Mb2920c|M.bovis_AF2122/97 FVGHIGELAGDEPRPGAALDVLSEAERQVYEALPGRGAATIDEIAVGSGL
Rv2896c|M.tuberculosis_H37Rv FVGHIGELAGDEPRPGAALDVLSEAERQVYEALPGRGAATIDEIAVGSGL
MAV_3749|M.avium_104 LIGHIGELAAEEPHPVTPLDGLGEAERRVYEALPGRGAATVEQLAAGCGL
Mvan_2204|M.vanbaalenii_PYR-1 VMGRIGELADELEHPVRPLDGLSGVQRLVYEALPARGARTVDEIGRDSGV
MAB_3212c|M.abscessus_ATCC_199 LAGRLGEFTAAPDRPGSVIDGLGDDEKRVYEALPGRGSTTVRELVRESGL
. *: **:: :* :* * : *::***.*. :: :: .*:
Mflv_4138|M.gilvum_PYR-GCK PATDVLGPLTMLNVRGLAVQENGGWKLAKRWPPAAQLPLV-----
TH_0843|M.thermoresistible__bu PPQEVLAPLSMLELAGLVVRRDGRWQLARR---------------
MMAR_1814|M.marinum_M VAEQVMGRLAILEVAGLAERDGGRWRLVRAGRARPAAEGVRARLV
MUL_2062|M.ulcerans_Agy99 VAEQVMGRLAILEVAGLAERDGGRWRLVRAGRSRPAAEGVRARLV
Mb2920c|M.bovis_AF2122/97 LPAQVLGPLAILEVAGLAECRDGRWRILRAGAGQAAAKGAAARLV
Rv2896c|M.tuberculosis_H37Rv LPAQVLGPLAILEVAGLAECRDGRWRILRAGAGQAAAKGAAARLV
MAV_3749|M.avium_104 LPEQALGPLAMLELAGLVRRQDGRWRIVRTAAGPAPPPA------
Mvan_2204|M.vanbaalenii_PYR-1 PAAQVLGPLTILEIDGLVERHEGKWRLARPARRAG----------
MAB_3212c|M.abscessus_ATCC_199 SVGRVQGALAILELEQLVIDVAGDWKLRRTNMVR-----------
. . *::*:: *. * *:: :