For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. marinum M MMAR_1040 (rpsQ)

annotation: 30S ribosomal protein S17, RpsQ
coordinates: 1267952 - 1268311
length: 119

MAEAKTGAKATKSAAAGAADGASKEKGPKHTPSTPKPRGRRKTRIGYVVSDKMQKTIVVELEDRVRHPLY
GKIIRTTKKVKVHDEHSAAGIGDRVSLMETRPLSATKRWRLVEILEKAK
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. marinum MMMAR_1040rpsQ-100% (119)30S ribosomal protein S17, RpsQ

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb0730rpsQ4e-5176.30% (135) 30S ribosomal protein S17
M. gilvum PYR-GCKMflv_5040-4e-4082.98% (94) ribosomal protein S17
M. tuberculosis H37RvRv0710rpsQ4e-5176.30% (135) 30S ribosomal protein S17
M. leprae Br4923MLBr_01854rpsQ9e-5180.65% (124) 30S ribosomal protein S17
M. abscessus ATCC 19977MAB_3811crpsQ1e-4175.93% (108) 30S ribosomal protein S17
M. avium 104MAV_4462rpsQ2e-4881.51% (119) 30S ribosomal protein S17
M. smegmatis MC2 155MSMEG_1445-1e-4387.37% (95) 30S ribosomal protein S17
M. thermoresistible (build 8)TH_0398rpsQ2e-4577.68% (112) PROBABLE 30S RIBOSOMAL PROTEIN S17 RPSQ
M. ulcerans Agy99MUL_0799rpsQ1e-6298.32% (119) 30S ribosomal protein S17
M. vanbaalenii PYR-1Mvan_1314-1e-4082.98% (94) ribosomal protein S17

CLUSTAL 2.0.9 multiple sequence alignment


Mb0730|M.bovis_AF2122/97            -MMAEAKTGAKAAPRVAKAAKAAPKKAAPNDAEAIGAANAANVKGPKHTP
Rv0710|M.tuberculosis_H37Rv         -MMAEAKTGAKAAPRVAKAAKAAPKKAAPNDAEAIGAANAANVKGPKHTP
MAV_4462|M.avium_104                --MAEAK-------------KAAPKKAAT------AASKDADAKGPKHTP
Mflv_5040|M.gilvum_PYR-GCK          --MADTK-------------------------------------GEKHTP
Mvan_1314|M.vanbaalenii_PYR-1       --MADTK-------------------------------------GAKYTP
MAB_3811c|M.abscessus_ATCC_199      --MSEKKTSA------------------------------GAAPGPRHTP
MSMEG_1445|M.smegmatis_MC2_155      --MAD-------------------------------------QKGPKYTP
TH_0398|M.thermoresistible__bu      --MAETKSDAQKD----------------------SAQKGSGQKGPKYTP
MMAR_1040|M.marinum_M               --MAEAKTGAKATKSAAAGAAD----------------GASKEKGPKHTP
MUL_0799|M.ulcerans_Agy99           -MMAEAKTGAKATKSAAAGAAD----------------GASKEKGPKHTP
MLBr_01854|M.leprae_Br4923          MMAAEAKTSAKAAPSATTAAPKGVA----------VKGGVSKDKGPKHTP
                                       ::                                       * ::**

Mb0730|M.bovis_AF2122/97            RTPKPRGRRKTRIGYVVSDKMQKTIVVELEDRMRHPLYGKIIRTTKKVKA
Rv0710|M.tuberculosis_H37Rv         RTPKPRGRRKTRIGYVVSDKMQKTIVVELEDRMRHPLYGKIIRTTKKVKA
MAV_4462|M.avium_104                PNPKVRGRRKTRIGYVVSDKMQKTIVVELEDRVKHPLYGKIIRTTKKVKA
Mflv_5040|M.gilvum_PYR-GCK          RTEDKRGRRKTAIGYVVSDKMQKTIVVELESRKSHPLYGKIIRTTTKVKA
Mvan_1314|M.vanbaalenii_PYR-1       RTEKPRGRRKTAIGYVVSDKMQKTIVVELESRKSHPLYGKIIRTTTKVKA
MAB_3811c|M.abscessus_ATCC_199      ATEQPRGRRKTAIGYVVSDKMQKTIVVELESRNRHSLYGKIIRTTSKVKA
MSMEG_1445|M.smegmatis_MC2_155      AAEKPRGRRKTAIGYVVSDKMQKTIVVELEDRKSHPLYGKIIRTTKKVKA
TH_0398|M.thermoresistible__bu      PAEKPRGRRKTAIGYVVSDKMQKTIVVELEDRKSHPLYGKIIRTTKKVKA
MMAR_1040|M.marinum_M               STPKPRGRRKTRIGYVVSDKMQKTIVVELEDRVRHPLYGKIIRTTKKVKV
MUL_0799|M.ulcerans_Agy99           SPPKPSGRRKTRIGYVVSDKMQKTIVVELEDRVRHPLYGKIIRTTKKVKV
MLBr_01854|M.leprae_Br4923          SIPKVRGGRKMRIGYVVSDKMQKTIVVELEDRMRHPLYGKIIRTTKKVKA
                                       .  * **  ******************.*  *.*********.***.

Mb0730|M.bovis_AF2122/97            HDEDSVAGIGDRVSLMETRPLSATKRWRLVEILEKAK
Rv0710|M.tuberculosis_H37Rv         HDEDSVAGIGDRVSLMETRPLSATKRWRLVEILEKAK
MAV_4462|M.avium_104                HDENSIAGIGDRVSLMETRPTSATKRWRLVEILEKAK
Mflv_5040|M.gilvum_PYR-GCK          HDENESAGIGDRVSLMETRPTSATKRWRLVEVLEKAK
Mvan_1314|M.vanbaalenii_PYR-1       HDENEDAGVGDRVSLMETRPTSATKRWRLVEVLEKAK
MAB_3811c|M.abscessus_ATCC_199      HDENGDAGVGDRVSLMETRPTSATKRWRLVEVLEKAK
MSMEG_1445|M.smegmatis_MC2_155      HDENGEAGIGDRVSLMETRPLSATKRWRLVEILEKAK
TH_0398|M.thermoresistible__bu      HDEHGIAGVGDRVSLMETRPLSATKRWRLVEILEKAK
MMAR_1040|M.marinum_M               HDEHSAAGIGDRVSLMETRPLSATKRWRLVEILEKAK
MUL_0799|M.ulcerans_Agy99           HDEHSAAGIGDRVSLMETRPLSATKRWRLVEILEKAK
MLBr_01854|M.leprae_Br4923          HDENSVAGIGDRVSLMETRPLSATKRWRLVEILEKAK
                                    ***.  **:*********** **********:*****