For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VARTFDDLVAESTSVPVAGWDFSWLDGRATEERPSWGYQRLLGQRLANATAALDLETGAGEVLAGAGNFP TTMAATESWPPNAALATKLLHPLGVVVVATGDKPPLPFTDAAFDLVTSRHPSNLCWGEVARVLQAGGTYF AQHVGPATLWSLREHFLGPRQHGGPDQYADRVRTEITGAGLEIVDMRIERLRVEFFDVGAVIYFLRKVIW FLPDFTVECYHDQLRALHDHIQSEGSFVTHSTRALIEARKPL
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. marinum M | MMAR_0673 | - | - | 100% (252) | hypothetical protein MMAR_0673 |
M. marinum M | MMAR_2363 | - | 4e-92 | 64.26% (249) | hypothetical protein MMAR_2363 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1623 | - | 1e-122 | 82.87% (251) | hypothetical protein Mb1623 |
M. gilvum PYR-GCK | - | - | - | - | - |
M. tuberculosis H37Rv | Rv1597 | - | 1e-121 | 82.47% (251) | hypothetical protein Rv1597 |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. avium 104 | MAV_3229 | - | 4e-98 | 65.46% (249) | hypothetical protein MAV_3229 |
M. smegmatis MC2 155 | - | - | - | - | - |
M. thermoresistible (build 8) | - | - | - | - | - |
M. ulcerans Agy99 | MUL_2840 | - | 1e-147 | 99.21% (252) | hypothetical protein MUL_2840 |
M. vanbaalenii PYR-1 | - | - | - | - | - |
CLUSTAL 2.0.9 multiple sequence alignment MMAR_0673|M.marinum_M MARTFDDLVAESTSVPVAGWDFSWLDGRATEERPSWGYQRLLGQRLANAT MUL_2840|M.ulcerans_Agy99 MARTFDDLVAESTSVPVAGWDFSWLDGRATEERPSWGYQRLLGQRLANAT Mb1623|M.bovis_AF2122/97 MARTFEDLVAEAASASVGGWDFSWLDGRATEERPSWGYQRQLSQRLANAT Rv1597|M.tuberculosis_H37Rv MARTFEDLVAEAASASVGGWGFSWLDGRATEERPSWGYQRQLSQRLANAT MAV_3229|M.avium_104 MRRTFEDLIAEAEAAPVDGWDFSWLDGRATEERPSWGYQRLLRDRLSTVS * ***:**:**: :..* **.******************* * :**:..: MMAR_0673|M.marinum_M AALDLETGAGEVLAGAGNFPTTMAATESWPPNAALATKLLHPLGVVVVAT MUL_2840|M.ulcerans_Agy99 AALDLETGAGEVLAGAGNFPTTMAATESWPPNAALATKLLHPLGVVVVAT Mb1623|M.bovis_AF2122/97 AALDLETGGGEVLAGAGNFPPTMVATEAWPPNAAMATRRLHPLGAVVVIT Rv1597|M.tuberculosis_H37Rv AALDLETGGGEVLAGAGNFPPTMVATEAWPPNAAMATRRLHPLGAVVVIT MAV_3229|M.avium_104 AALDIHTGGGEVLAGAGPFPPTMAAIETWPPNAALATARLHPLGAVVVAV ****:.**.******** **.**.* *:******:** *****.*** . MMAR_0673|M.marinum_M GDKPPLPFTDAAFDLVTSRHPSNLCWGEVARVLQAGGTYFAQHVGPATLW MUL_2840|M.ulcerans_Agy99 GDKPPLPFTDAAFDLVTSRHPSNLCWGEVARVLQAGGTYFAQHVGPATLW Mb1623|M.bovis_AF2122/97 GDKPPLPFADAAFDLVTSRHPSTRWWTEIARVLRAGGSYFAQHVGPATLW Rv1597|M.tuberculosis_H37Rv GDKPPLPFADAAFDLVTSRHPSTRWWTEIARVLRAGGSYFAQHVGPATLW MAV_3229|M.avium_104 RDEPPLPFADHAFDLVTSRHPVSVWWSEIARVLRPGGSYFAQHIGPATMG *:*****:* ********** . * *:****:.**:*****:****: MMAR_0673|M.marinum_M SLREHFLGPRQHGGPDQYADRVRTEITGAGLEIVDMRIERLRVEFFDVGA MUL_2840|M.ulcerans_Agy99 SLREHFLGPRQHGGPDQYADRVRTEITGAGLEIVDMWIERLRVEFFDVGA Mb1623|M.bovis_AF2122/97 DLREHFLGPREHNGADQYAQVVRTCITDAGLEIVDLQMERLRVEFFDVGA Rv1597|M.tuberculosis_H37Rv DLREHFLGPREHNGADQYAQVVRTCITDAGLEIVDLQMERLRVEFFDVGA MAV_3229|M.avium_104 ELVEYFIGPQPQKWAEFHPDAVRAQVAAAGLRVVEVRMERLRAEFFDIGA .* *:*:**: : .: :.: **: :: ***.:*:: :****.****:** MMAR_0673|M.marinum_M VIYFLRKVIWFLPDFTVECYHDQLRALHDHIQSEGSFVTHSTRALIEARK MUL_2840|M.ulcerans_Agy99 VIYFPRKVIWFLPDFTVECYHDQLRALHDHIQSEGSFVTHSTRALIEARK Mb1623|M.bovis_AF2122/97 VIYFLRKVIWFLPDFTVEGYHDRLRALHERIQAEGPFVTYSTRALIEARK Rv1597|M.tuberculosis_H37Rv VIYFLRKVIWFLPDFTVEGYHDRLRALHERIQAEGPFVTYSTRALIEARK MAV_3229|M.avium_104 VVYFLRKVIWTVPDFSVARYRDRLAELHERIESQGPFVAHPTRVLVEARK *:** ***** :***:* *:*:* **::*:::*.**::.**.*:**** MMAR_0673|M.marinum_M PL MUL_2840|M.ulcerans_Agy99 PL Mb1623|M.bovis_AF2122/97 PS Rv1597|M.tuberculosis_H37Rv PS MAV_3229|M.avium_104 PE *