For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MRRTFEDLIAEAEAAPVDGWDFSWLDGRATEERPSWGYQRLLRDRLSTVSAALDIHTGGGEVLAGAGPFP PTMAAIETWPPNAALATARLHPLGAVVVAVRDEPPLPFADHAFDLVTSRHPVSVWWSEIARVLRPGGSYF AQHIGPATMGELVEYFIGPQPQKWAEFHPDAVRAQVAAAGLRVVEVRMERLRAEFFDIGAVVYFLRKVIW TVPDFSVARYRDRLAELHERIESQGPFVAHPTRVLVEARKPE
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. avium 104 | MAV_3229 | - | - | 100% (252) | hypothetical protein MAV_3229 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1623 | - | 1e-103 | 69.08% (249) | hypothetical protein Mb1623 |
M. gilvum PYR-GCK | - | - | - | - | - |
M. tuberculosis H37Rv | Rv1597 | - | 1e-102 | 68.67% (249) | hypothetical protein Rv1597 |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. marinum M | MMAR_2363 | - | 1e-111 | 76.00% (250) | hypothetical protein MMAR_2363 |
M. smegmatis MC2 155 | - | - | - | - | - |
M. thermoresistible (build 8) | - | - | - | - | - |
M. ulcerans Agy99 | MUL_2840 | - | 2e-96 | 64.66% (249) | hypothetical protein MUL_2840 |
M. vanbaalenii PYR-1 | - | - | - | - | - |
CLUSTAL 2.0.9 multiple sequence alignment Mb1623|M.bovis_AF2122/97 ---MARTFEDLVAEAASASVGGWDFSWLDGRATEERPSWGYQRQLSQRLA Rv1597|M.tuberculosis_H37Rv ---MARTFEDLVAEAASASVGGWGFSWLDGRATEERPSWGYQRQLSQRLA MUL_2840|M.ulcerans_Agy99 ---MARTFDDLVAESTSVPVAGWDFSWLDGRATEERPSWGYQRLLGQRLA MAV_3229|M.avium_104 ---MRRTFEDLIAEAEAAPVDGWDFSWLDGRATEERPSWGYQRLLRDRLS MMAR_2363|M.marinum_M MTAAQRSFEELVAEAMAAPVVGWDFSWLEGRATEERPSWGYQRLMSQRLA *:*::*:**: :..* **.****:************** : :**: Mb1623|M.bovis_AF2122/97 NATAALDLETGGGEVLAGAGNFPPTMVATEAWPPNAAMATRRLHPLGAVV Rv1597|M.tuberculosis_H37Rv NATAALDLETGGGEVLAGAGNFPPTMVATEAWPPNAAMATRRLHPLGAVV MUL_2840|M.ulcerans_Agy99 NATAALDLETGAGEVLAGAGNFPTTMAATESWPPNAALATKLLHPLGVVV MAV_3229|M.avium_104 TVSAALDIHTGGGEVLAGAGPFPPTMAAIETWPPNAALATARLHPLGAVV MMAR_2363|M.marinum_M RASAALDIHTGGGEVLSGAPKFPPTMAATESWPPNAALATQRLRPRGVVV .:****:.**.****:** **.**.* *:******:** *:* *.** Mb1623|M.bovis_AF2122/97 VITGDKPPLPFADAAFDLVTSRHPSTRWWTEIARVLRAGGSYFAQHVGPA Rv1597|M.tuberculosis_H37Rv VITGDKPPLPFADAAFDLVTSRHPSTRWWTEIARVLRAGGSYFAQHVGPA MUL_2840|M.ulcerans_Agy99 VATGDKPPLPFTDAAFDLVTSRHPSNLCWGEVARVLQAGGTYFAQHVGPA MAV_3229|M.avium_104 VAVRDEPPLPFADHAFDLVTSRHPVSVWWSEIARVLRPGGSYFAQHIGPA MMAR_2363|M.marinum_M VATRDEPPLPFADEAFDLVISRHPITVWWSEIARVLRPGGTYLAQHPGPA * . *:*****:* ***** **** . * *:****:.**:*:*** *** Mb1623|M.bovis_AF2122/97 TLWDLREHFLGPREHNGADQYAQVVRTCITDAGLEIVDLQMERLRVEFFD Rv1597|M.tuberculosis_H37Rv TLWDLREHFLGPREHNGADQYAQVVRTCITDAGLEIVDLQMERLRVEFFD MUL_2840|M.ulcerans_Agy99 TLWSLREHFLGPRQHGGPDQYADRVRTEITGAGLEIVDMWIERLRVEFFD MAV_3229|M.avium_104 TMGELVEYFIGPQPQKWAEFHPDAVRAQVAAAGLRVVEVRMERLRAEFFD MMAR_2363|M.marinum_M TVAELVGHVIGPQPQLWERLEPAAQRAQAQAAGLQIVELRMERLRAEFFD *: .* :.:**: : . *: ***.:*:: :****.**** Mb1623|M.bovis_AF2122/97 VGAVIYFLRKVIWFLPDFTVEGYHDRLRALHERIQAEGPFVTYSTRALIE Rv1597|M.tuberculosis_H37Rv VGAVIYFLRKVIWFLPDFTVEGYHDRLRALHERIQAEGPFVTYSTRALIE MUL_2840|M.ulcerans_Agy99 VGAVIYFPRKVIWFLPDFTVECYHDQLRALHDHIQSEGSFVTHSTRALIE MAV_3229|M.avium_104 IGAVVYFLRKVIWTVPDFSVARYRDRLAELHERIESQGPFVAHPTRVLVE MMAR_2363|M.marinum_M IGAVVYFLRKLIWTVPDFTAEPYFQRLVELHERIQVDGRFVTHPTRVLVE :***:** **:** :***:. * ::* **::*: :* **::.**.*:* Mb1623|M.bovis_AF2122/97 ARKPS- Rv1597|M.tuberculosis_H37Rv ARKPS- MUL_2840|M.ulcerans_Agy99 ARKPL- MAV_3229|M.avium_104 ARKPE- MMAR_2363|M.marinum_M ARKPTE ****