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M. marinum M MMAR_0352 (-)

annotation: DNA glycosylase
coordinates: 401317 - 402228
length: 303

VKIERTVTFAGAAGFGHTLAPLRRGRGDPCFRVPGDGTIWRTSLLGSGPVAARFSRCAPDTAHCQAWGSG
AEEFIDRLPALLGADDDAADFVPRDPTVAAAHRRLPNLRLGRTGQVLEAVLPAVIEQRVPGAEAFRSWRL
LVTRYGTPAPGPAPDGMRVPPSADAWRAIPSWEFHRANVDPGRARTVVGCAQRASALQRLVTRPVGEALA
ALTSLPGVGVWTAAETVQRAFGDADAVSVGDYHIPKMIGWTLLGHPVDDAGMLELLEPMRPHRHRVVRLL
EASGLAREPRRGPRLPVQNIRSL
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. marinum MMMAR_0352--100% (303)DNA glycosylase

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb0147-1e-14982.84% (303) hypothetical protein Mb0147
M. gilvum PYR-GCKMflv_1111-1e-11767.00% (297) hypothetical protein Mflv_1111
M. tuberculosis H37RvRv0142-1e-14982.84% (303) hypothetical protein Rv0142
M. leprae Br4923-----
M. abscessus ATCC 19977MAB_0395c-1e-5945.80% (286) hypothetical protein MAB_0395c
M. avium 104MAV_5154-1e-14178.60% (299) hypothetical protein MAV_5154
M. smegmatis MC2 155MSMEG_6468-1e-11667.34% (297) hypothetical protein MSMEG_6468
M. thermoresistible (build 8)TH_0074-6e-2554.95% (91) conserved hypothetical protein
M. ulcerans Agy99-----
M. vanbaalenii PYR-1Mvan_5701-1e-12569.64% (303) hypothetical protein Mvan_5701

CLUSTAL 2.0.9 multiple sequence alignment


Mflv_1111|M.gilvum_PYR-GCK          ----MTGSTAGVVFPGPVRPGWTLSPLRRGRADPCYHDAPDGAIWRTSLM
Mvan_5701|M.vanbaalenii_PYR-1       ----MR-ISASVEFAGPVNPGWTLSPLRRGRGDPCYHDASDGAIWRTSLM
Mb0147|M.bovis_AF2122/97            MRSIDVVVEAVVTFAGAAGFAHTLAPLRRGQQDPCFRVPGDGTIWRTSLL
Rv0142|M.tuberculosis_H37Rv         MRSIDVVVEAVVTFAGAAGFAHTLAPLRRGQQDPCFRVPGDGTIWRTSLL
MMAR_0352|M.marinum_M               -----MKIERTVTFAGAAGFGHTLAPLRRGRGDPCFRVPGDGTIWRTSLL
MAV_5154|M.avium_104                ----MKSSARTVVFPGAVSFGHTLAPLRRGLGDPCFLAPGDGSIWRTSLL
MSMEG_6468|M.smegmatis_MC2_155      -----------MVFSGPASPGLTLAPLRRGGIDPCYRVDAAGAIWRTSLM
MAB_0395c|M.abscessus_ATCC_199      -----------------MDIRRTLGIHRRGSGDPAYRVSPGGSIIRGSYT
TH_0074|M.thermoresistible__bu      ---VDAAVRRSVVFAGPVSPGLTLAPLRRGRGDPCHHDSPDGSIWRTSLM
                                                          **.  ***  **..     *:* * *  

Mflv_1111|M.gilvum_PYR-GCK          RSGPVTARISHSARDTIDCEAWGPGAAEFTEGLPALLGADDDATGFDPAD
Mvan_5701|M.vanbaalenii_PYR-1       RSGPVTARLSRSAPATVDCEAWGPGAAEFTDTLPGLLGADDDAAGFDPQE
Mb0147|M.bovis_AF2122/97            PTGPVTARISRAGRDAARCVAWGSGAEEFVDMAPAMLGAADDASDFVPLH
Rv0142|M.tuberculosis_H37Rv         PTGPVTARISRAGRDAARCVAWGSGAEEFVDMAPAMLGAADDASDFVPLH
MMAR_0352|M.marinum_M               GSGPVAARFSRCAPDTAHCQAWGSGAEEFIDRLPALLGADDDAADFVPRD
MAV_5154|M.avium_104                PTGPVTARISRAGTNAVQCVAWGAGAAQFVDMLPAMLGSEDDASDFVPRH
MSMEG_6468|M.smegmatis_MC2_155      PSGPVTARITRAATDAADCQAWGEGADEFIDRLPALLGVDDDASDFAPAE
MAB_0395c|M.abscessus_ATCC_199      PDGPGVLAISRADKTVVG-RAYGDGAEWLLDRLPRLLGADDEPEALTPKH
TH_0074|M.thermoresistible__bu      ADGPVTVRIARTGERSVECRMWGAGATEFAESLPAFLGADDDPSGFRPHX
                                      ** .  :::          :* **  : :  * :**  *:.  : *  

Mflv_1111|M.gilvum_PYR-GCK          PTIAKAAGRAAHLRLGRTGRVLEALVPAILEQRVVGKDARRSWRQLVTEY
Mvan_5701|M.vanbaalenii_PYR-1       PTVAAALRKAPHLRLGRTGRVLEAIIPAVLEQRVVGKDAFRAWRLLVTRY
Mb0147|M.bovis_AF2122/97            PAVAAAHRRLPNLRLGRTGQVLEALIPAVIEQRVPGADAFRSWRLLVSKY
Rv0142|M.tuberculosis_H37Rv         PAVAAAHRRLPNLRLGRTGQVLEALIPAVIEQRVPGADAFRSWRLLVSKY
MMAR_0352|M.marinum_M               PTVAAAHRRLPNLRLGRTGQVLEAVLPAVIEQRVPGAEAFRSWRLLVTRY
MAV_5154|M.avium_104                PTVAAAQRRVPHLRLGRTGLVLEALIPAIIEQRVPGADAFRSWRVLVSKY
MSMEG_6468|M.smegmatis_MC2_155      PTIAKARRQVPHLRLGRTGRMLEALIPAIIEQRVYGLDAWRAWRALVTKF
MAB_0395c|M.abscessus_ATCC_199      DTVARLVHGGTGVRLGATDRVWEALVPAVLEQKVPGAEAWRAWRYLINNV
TH_0074|M.thermoresistible__bu      ---XXSVRRSAHAR-GAT-------------PVTVGSGSRSRLNAVVLFF
                                              .  * * *               . *  :    . ::   

Mflv_1111|M.gilvum_PYR-GCK          GAPAPGPAPAHMRVPPTPETWRRIPSWKFHLANVDPGRARTVVGCAQRAD
Mvan_5701|M.vanbaalenii_PYR-1       GAPAPGPAPAHMRIPPTAEAWRRIPSWEFHRANVDPRRARTVVGCAQRAD
Mb0147|M.bovis_AF2122/97            GTQAPGPAPPGMRVPPSAEVWRHIPSWEFHRANVDPGRARAVVGCAQRAA
Rv0142|M.tuberculosis_H37Rv         GTQAPGPAPPGMRVPPSAEVWRHIPSWEFHRANVDPGRARAVVGCAQRAA
MMAR_0352|M.marinum_M               GTPAPGPAPDGMRVPPSADAWRAIPSWEFHRANVDPGRARTVVGCAQRAS
MAV_5154|M.avium_104                GTPAPGPAPERMRVPPSAQAWRSIPSWEFHRANVDPRRAQTVVTCARRAA
MSMEG_6468|M.smegmatis_MC2_155      GTPAPGPAPDGMRVVPSAEVWRRIPSWEFHRANVDPGRARTIVMCAQRAD
MAB_0395c|M.abscessus_ATCC_199      GIDLGG-----AKTPPPQRQWLDIPSWEWHKSGAEPVRMRTIRAAAT---
TH_0074|M.thermoresistible__bu      --------------------------------------------------
                                                                                      

Mflv_1111|M.gilvum_PYR-GCK          ALERLVGRSPEAARTAMMSLPGIGVWTAAETAQRAFGDADALSVGDYHLA
Mvan_5701|M.vanbaalenii_PYR-1       ALERLVDRPGEAARTAMMSLPGVGIWTAAETAQRALGDADALSVGDYHLS
Mb0147|M.bovis_AF2122/97            SLERLVSLPAARAAEALTSLPGVGVWTAAETTQRVFGDADAVSVGDYHIP
Rv0142|M.tuberculosis_H37Rv         SLERLVSLPAARAAEALTSLPGVGVWTAAETTQRVFGDADAVSVGDYHIP
MMAR_0352|M.marinum_M               ALQRLVTRPVGEALAALTSLPGVGVWTAAETVQRAFGDADAVSVGDYHIP
MAV_5154|M.avium_104                SLERLVSRPAAQARAALTSLPGVGEWTAAETAQRAFGDADAVSVGDYHIP
MSMEG_6468|M.smegmatis_MC2_155      SLERLT---HERAAVTLRSLPGVGEWTAAETMQRVFGDADALSAGDYHLA
MAB_0395c|M.abscessus_ATCC_199      -------IDVETKPEHLTAVHGIGPWTEAEIRIRALGDPDAVPVGDYHIP
TH_0074|M.thermoresistible__bu      -------------EILLVACVVLVTWFALYALYRLITDES----------
                                                    : :   :  *       * : * .          

Mflv_1111|M.gilvum_PYR-GCK          KIVGWTLLGHPIDDAAMVELLEPLRPHRHRAVRMLEVSGMTVNPRFGPRL
Mvan_5701|M.vanbaalenii_PYR-1       GVVGWTLLGYPIDDPQMVELLEPLRPHRHRAVRLLEVSGLAFKPRFGPRL
Mb0147|M.bovis_AF2122/97            KMIGWTLVGRPVDDAGMLELLEPMRPHRHRVVRLLEASGLAREPRRGPRL
Rv0142|M.tuberculosis_H37Rv         KMIGWTLVGRPVDDAGMLELLEPMRPHRHRVVRLLEASGLAREPRRGPRL
MMAR_0352|M.marinum_M               KMIGWTLLGHPVDDAGMLELLEPMRPHRHRVVRLLEASGLAREPRRGPRL
MAV_5154|M.avium_104                KMVGWTLLGRPVDDAGMLELLEPMRPHRQRVVRLLEASGLAREPRRGPRL
MSMEG_6468|M.smegmatis_MC2_155      TLVGQALTGEPVDDAGMVELLEPMRPHRHRAVRLLEASGMFVYRRRGARQ
MAB_0395c|M.abscessus_ATCC_199      AQVGFALTGQKTDDAGMLELLEPYAGQRYRIIRLIELVAPKP-ARRGSRM
TH_0074|M.thermoresistible__bu      --------------------------------------------------
                                                                                      

Mflv_1111|M.gilvum_PYR-GCK          SIPNLADL
Mvan_5701|M.vanbaalenii_PYR-1       PIPHLADL
Mb0147|M.bovis_AF2122/97            PVQNIRAL
Rv0142|M.tuberculosis_H37Rv         PVQNIRAL
MMAR_0352|M.marinum_M               PVQNIRSL
MAV_5154|M.avium_104                PVQQIHSL
MSMEG_6468|M.smegmatis_MC2_155      AIPKLRTL
MAB_0395c|M.abscessus_ATCC_199      PVRDYRNF
TH_0074|M.thermoresistible__bu      --------