For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
NTLHVNIGLACYSDWAFTSAVVALVVALLLLAYELAYVGSRRLDNRTRVVPGSVAADSGTPGIVVDSLQR PFGERVGQAGLAVAYLGIGLLLACILLRGLATLRVPWGNMYEFINLTCFSELVAGAIVLRRRQYRPLWVF LLVSVLILLTISGRWLYANAAPVIPALQSYWLPIHVSVVSLGSGIFLVAGIASILFLLSTSRLVASDPEG AKALARLVRRFPDAQTLDRIAYRTTIFAFPVFGFGVIFGAIWAEQAWGRYWGWDPKETVSFVAWVVYAAY LHARSTAGWRDRRAAWINVVGCVAMVFNLFFVNLVTVGLHSYAGVD*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. leprae Br4923 | MLBr_02409 | - | - | 100% (327) | putative cytochrome C biogenesis protein |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0542 | ccsA | 1e-154 | 82.82% (326) | cytochrome C-type biogenesis protein CcsA |
M. gilvum PYR-GCK | Mflv_0049 | - | 1e-137 | 73.07% (323) | cytochrome c assembly protein |
M. tuberculosis H37Rv | Rv0529 | ccsA | 1e-154 | 82.82% (326) | cytochrome C-type biogenesis protein CcsA |
M. abscessus ATCC 19977 | MAB_3973c | - | 1e-124 | 68.67% (332) | cytochrome c-type biogenesis protein CcsA |
M. marinum M | MMAR_0875 | ccsB | 1e-156 | 83.18% (327) | cytochrome C-type biogenesis protein, CcsB |
M. avium 104 | MAV_4616 | ccsB | 1e-156 | 83.44% (326) | cytochrome c-type biogenesis protein CcsB |
M. smegmatis MC2 155 | MSMEG_0974 | ccsB | 1e-146 | 76.90% (329) | cytochrome c-type biogenesis protein CcsB |
M. thermoresistible (build 8) | TH_2248 | ccsB | 1e-134 | 71.34% (328) | POSSIBLE CYTOCHROME C-TYPE BIOGENESIS PROTEIN CCSA |
M. ulcerans Agy99 | MUL_0628 | ccsB | 1e-156 | 82.57% (327) | cytochrome C-type biogenesis protein, CcsB |
M. vanbaalenii PYR-1 | Mvan_0869 | - | 1e-141 | 75.93% (324) | cytochrome c assembly protein |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_0049|M.gilvum_PYR-GCK --MSTTIDLDLARYSDWAFTSSVLVLVAALLLFAVELAYSRSRKVEDREL Mvan_0869|M.vanbaalenii_PYR-1 --MSTTIDIGLARYSDWAFTSSVLVLVAALLLLAVELAYSRSRKADNREL TH_2248|M.thermoresistible__bu --VSTEIDIGLARYSDWAFTTSVLVLMGALLLLAIELAYARSRKVETREL MSMEG_0974|M.smegmatis_MC2_155 MMNTEHIDIGLARYSDWAFTSSVLVLVGALLLLAVEMAYSRSRRVESREL Mb0542|M.bovis_AF2122/97 -MNTLHVNVGLARYSDWAFTSAVVALVVALLLLAFEFAQVRGRGLAP-LA Rv0529|M.tuberculosis_H37Rv -MNTLHVNVGLARYSDWAFTSAVVALVVALLLLAFEFAQVRGRGLAP-LA MLBr_02409|M.leprae_Br4923 -MNTLHVNIGLACYSDWAFTSAVVALVVALLLLAYELAYVGSRRLDNRTR MMAR_0875|M.marinum_M -MNTANINIDLARYSDWAFTSAVVALVVALLLLAFELAYVRGRKVDEREL MUL_0628|M.ulcerans_Agy99 -MNTANINIDLARYSDWAFTSAVVALVVALLLLAFELAYVRGRKVDEREL MAV_4616|M.avium_104 -MNTVHVNIELARYSDWAFTSAVVALVIALLLLAFELAYAGGRRADARAR MAB_3973c|M.abscessus_ATCC_199 -MNSTNIDVNLAKFSDYAFTSAIVVMVGALVLLAIELAYRQSDRAAQREL : ::: ** :**:***::::.:: **:*:* *:* . Mflv_0049|M.gilvum_PYR-GCK VGAASGR-----VSGDSSAPGVVVDAPRRSMDERLGAAGMSLTYVGIALL Mvan_0869|M.vanbaalenii_PYR-1 VTAGGGAG----VAHDSAAPGVVVDAPRRPFDERMGTAGVALTYVGILLL TH_2248|M.thermoresistible__bu AAAGVAASGAVTTSPGAAAPGVVVEAPKRPVDERIGGAGLALAYVGIAAL MSMEG_0974|M.smegmatis_MC2_155 VGAGGPS----VVGADSATPGVVVESPKRPFDERVGKTGLALTYVGIGLL Mb0542|M.bovis_AF2122/97 VPAGSVAT-------DSATPGIVADQRHRPFDERVGRGGLAVAYLGIGLL Rv0529|M.tuberculosis_H37Rv VPAGSVAT-------DSATPGIVADQRHRPFDERVGRGGLAVAYLGIGLL MLBr_02409|M.leprae_Br4923 VVPGSVAA-------DSGTPGIVVDSLQRPFGERVGQAGLAVAYLGIGLL MMAR_0875|M.marinum_M VLAGSVAS-------DATTPGIVLDGPQRPLDERVGRAGLAVVYLGIGLL MUL_0628|M.ulcerans_Agy99 VLAGSVAS-------DATTPGIVLDGPRRPLDERVGRAGLAVVYLGIGLL MAV_4616|M.avium_104 VLAGAVSA-------DSATPGVVDEVPRRPVDERAGRAGLAVVYLGTGLL MAB_3973c|M.abscessus_ATCC_199 VSSGGDVV-----AAGENRPGLVVPQGRRPLAERVGGAGQALAYLGIGLL . .. . **:* :*.. ** * * ::.*:* * Mflv_0049|M.gilvum_PYR-GCK LACIVLRGLSTSRVPWGNMYEFINLTCFCGLVAAAWVLR----KPQYRSL Mvan_0869|M.vanbaalenii_PYR-1 AACIVLRGLSTSRVPWGNMYEFINLTSFCGLVAAAWVLR----RPQYRSL TH_2248|M.thermoresistible__bu LGSIVLRGLATGRAPWGNMYEFVNVTCLCGLVAAAVMLR----RARYRPL MSMEG_0974|M.smegmatis_MC2_155 LVCIVLRGVSTSRVPWGNMYEFINLTCFCGLVAAAVVLR----RPQYRTL Mb0542|M.bovis_AF2122/97 LACVVLRGLATQRVPWGNMYEFINLTCLSGLIAGAVVLR----RARYRPL Rv0529|M.tuberculosis_H37Rv LACVVLRGLATQRVPWGNMYEFINLTCLSGLIAGAVVLR----RARYRPL MLBr_02409|M.leprae_Br4923 LACILLRGLATLRVPWGNMYEFINLTCFSELVAGAIVLR----RRQYRPL MMAR_0875|M.marinum_M LACIVLRGLATMRVPWGNMYEFINLTCMSGLIAGAVVLR----RPQYRSL MUL_0628|M.ulcerans_Agy99 LACIVLRGLATMRVPWGNMYEFINLTCMSGLIAGAVVLR----RPQYRSL MAV_4616|M.avium_104 LACLVLRGLATLRVPWGNMYEFINLTCLCGLVAGAIVLR----RPQYRPL MAB_3973c|M.abscessus_ATCC_199 LLCIVLRGVATTRVPWGNMYEFINLTCACGLVTAAIVLRPRGNAEGRRAL .::***::* *.********:*:*. . *::.* :** *.* Mflv_0049|M.gilvum_PYR-GCK WVFVLVPVLILLTVSGKWLYSHAAPVMPALQSYWLPIHVSVVSLGSGVFL Mvan_0869|M.vanbaalenii_PYR-1 WVFVLVPVLILLTVSGKWLYSHAAPVMPALQSYWLPIHVSVVSLGSGVFL TH_2248|M.thermoresistible__bu WVFVLVPVLILLTVSGRWLYTDAAPVMPALQSYWLPIHVSVVSLGSGVFL MSMEG_0974|M.smegmatis_MC2_155 WVFVLVPVLILLTVSGRWLYTNAAPVMPALQSYWLPIHVSVVSLGSGVFL Mb0542|M.bovis_AF2122/97 WVFLLVPVLILLTVSGRWLYANAAPVMPALQSYWLPIHVSVVSLGSGVFL Rv0529|M.tuberculosis_H37Rv WVFLLVPVLILLTVSGRWLYANAAPVMPALQSYWLPIHVSVVSLGSGVFL MLBr_02409|M.leprae_Br4923 WVFLLVSVLILLTISGRWLYANAAPVIPALQSYWLPIHVSVVSLGSGIFL MMAR_0875|M.marinum_M WVFLLLPVLILLTVSGRWLYTNAAPVMPALQSYWLPIHVSVVSLGSGVFL MUL_0628|M.ulcerans_Agy99 WVFLLLPVLILLTVSGRWLYTNAAPVMPALQSYWLPIHVSVISLGSGVFL MAV_4616|M.avium_104 WVFLLLPVLILLTVSGRWLYTNAAPVMPALQSYWLPIHVSVVSLGSGVFL MAB_3973c|M.abscessus_ATCC_199 WVFVLIPVLILLAVSGRYLYTYAAPVMPALQSYWLPIHVSVVSLGSGVFL ***:*:.*****::**::**: ****:**************:*****:** Mflv_0049|M.gilvum_PYR-GCK VAGVASILFLVKMSRLAD----RDD-AIGRIVAKLPDGQTLDRIAYRTTI Mvan_0869|M.vanbaalenii_PYR-1 VAGVASILFLLKMSRLGDP--GRTD-AIGRIVAKLPDAQTLDRIAYRTTI TH_2248|M.thermoresistible__bu VAGVASILFLVKMSRFGQV--AGDG-LWARIVDRLPDAQTLDRIAYRATI MSMEG_0974|M.smegmatis_MC2_155 VAGVASILFLLKMSPLGQPQEGRDS-VWARIIDRVPDAQTLDRIAYRTTI Mb0542|M.bovis_AF2122/97 VAGVASILFLVRTSRLG--EPTGEG-ALAGMVRRLPDAQTLDGIAYRTTI Rv0529|M.tuberculosis_H37Rv VAGVASILFLVRTSRLG--EPTGEG-ALAGMVRRLPDAQTLDGIAYRTTI MLBr_02409|M.leprae_Br4923 VAGIASILFLLSTSRLVASDPEGAK-ALARLVRRFPDAQTLDRIAYRTTI MMAR_0875|M.marinum_M VAGISSILFLLRTSRLGAPDSQPAESTLGRLVQRLPDAQTLDRIAYRTTI MUL_0628|M.ulcerans_Agy99 VAGISSILFLLRTSRLGAPDSQPAESTLGRLVQRLPDAQTLDRIAYRTTI MAV_4616|M.avium_104 VAGIASILFLLRTSPLG--DPGNDS-APARLVRRFPDAQTLDRIAYRTTI MAB_3973c|M.abscessus_ATCC_199 VAGVASILFLAKMYFPD-----------NSFVQRLPDAQALDRLAYRTTI ***::***** :: :.**.*:** :***:** Mflv_0049|M.gilvum_PYR-GCK FAFPVFGFGVIFGAIWAEEAWGRYWGWDPKETVSFIAWVVYAAYLHARST Mvan_0869|M.vanbaalenii_PYR-1 FAFPVFGFGVIFGAIWAEEAWGRYWGWDPKETVSFIAWVIYAAYLHARST TH_2248|M.thermoresistible__bu FAFPVFGFGVIFGAIWAEEAWGRYWGWDPKETVSFIAWVVYAAYLHARST MSMEG_0974|M.smegmatis_MC2_155 FAFPVFGFGVIFGAIWAEEAWGRYWGWDPKETVSFIAWVVYAAYLHARST Mb0542|M.bovis_AF2122/97 FAFPVFGFGVIFGAIWAEEAWGRYWGWDPKETVSFVAWVVYAAYLHARST Rv0529|M.tuberculosis_H37Rv FAFPVFGFGVIFGAIWAEEAWGRYWGWDPKETVSFVAWVVYAAYLHARST MLBr_02409|M.leprae_Br4923 FAFPVFGFGVIFGAIWAEQAWGRYWGWDPKETVSFVAWVVYAAYLHARST MMAR_0875|M.marinum_M FAFPVFGFGVIFGAIWAEQAWGRYWGWDPKETVSFVAWVVYAAYLHARST MUL_0628|M.ulcerans_Agy99 FAFPVFGFGVIFGAIWAEQAWGRYWGWDPKETVSFVAWVVYAAYLHARST MAV_4616|M.avium_104 FAFPVFGFGVIFGAIWAEEAWGRYWGWDPKETVSFVAWVIYAAYLHARST MAB_3973c|M.abscessus_ATCC_199 FGFPIFGFGVIFGAIWAEEAWGRFWAWDPKETVSFVAWVIYAAYLHARST *.**:*************:****:*.*********:***:********** Mflv_0049|M.gilvum_PYR-GCK AGWRDRKAAWINIAGFVAMVFNLFFINLVTVGLHSYAGVG Mvan_0869|M.vanbaalenii_PYR-1 AGWRDKKAAWINVAGFVAMVFNLFFINLVTVGLHSYAGVG TH_2248|M.thermoresistible__bu AGWRDRKAAWINVIGFVAMVFNLFFINLVTVGLHSYAGVG MSMEG_0974|M.smegmatis_MC2_155 AGWRDRKAAWINVVGFVAMVFNLFFINLVTVGLHSYAGVG Mb0542|M.bovis_AF2122/97 AGWRDRKAAWINVAGFVAMVFNLFFVNLVTVGLHSYAGVG Rv0529|M.tuberculosis_H37Rv AGWRDRKAAWINVAGFVAMVFNLFFVNLVTVGLHSYAGVG MLBr_02409|M.leprae_Br4923 AGWRDRRAAWINVVGCVAMVFNLFFVNLVTVGLHSYAGVD MMAR_0875|M.marinum_M AGWRDRKAAWINVAGFVAMVFNLFFVNLVTVGLHSYAGVG MUL_0628|M.ulcerans_Agy99 AGWRDRKAAWINVAGFVAMVFNLFFVNLVTVGLHSYAGVV MAV_4616|M.avium_104 AGWRDRKAAWINVAGFVAMVFNLFFVNLVTVGLHSYAGVG MAB_3973c|M.abscessus_ATCC_199 AGWRDKKAAWINVAGFVAMVFNLFFVNLVTVGLHSYAGVS *****::*****: * *********:*************