For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
SAPDSPALVGMSIGAVLDLLRSDFPDVTISKIRFLEAEGLVTPQRSASGYRRFTAYDCARLRFILTAQRD HYLPLKVIRAQLDAQPDGELPSFGSPYVAPRLFSVTGGPGAGVGSGVGSDIPAVSPAGVRLSREDLLDRS GVADDLLTALLKAGVITTGPGGFFDEHAIVILQCARALSEYGVEPRHLRAFRSAADRQSDLIVQIAGPIV KAGKAGARDRADDLAREVAALAITLHTSLIKSAVRGVLHR*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. leprae Br4923 | MLBr_02075 | - | - | 100% (251) | hypothetical protein MLBr_02075 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1859 | - | 1e-119 | 87.25% (251) | hypothetical protein Mb1859 |
M. gilvum PYR-GCK | Mflv_3401 | - | 2e-99 | 75.39% (256) | MerR family transcriptional regulator |
M. tuberculosis H37Rv | Rv1828 | - | 1e-119 | 87.25% (251) | hypothetical protein Rv1828 |
M. abscessus ATCC 19977 | MAB_2404 | - | 2e-93 | 69.72% (251) | hypothetical protein MAB_2404 |
M. marinum M | MMAR_2705 | - | 1e-117 | 84.86% (251) | putative regulatory protein |
M. avium 104 | MAV_2887 | - | 1e-117 | 85.66% (251) | transcriptional regulator, MerR family protein |
M. smegmatis MC2 155 | MSMEG_3646 | - | 1e-102 | 76.89% (251) | transcriptional regulator, MerR family protein |
M. thermoresistible (build 8) | TH_1127 | - | 1e-104 | 77.29% (251) | CONSERVED HYPOTHETICAL PROTEIN |
M. ulcerans Agy99 | MUL_3047 | - | 1e-117 | 84.46% (251) | putative regulatory protein |
M. vanbaalenii PYR-1 | Mvan_3134 | - | 1e-108 | 80.48% (251) | MerR family transcriptional regulator |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_3401|M.gilvum_PYR-GCK MTQPDTPGPSGMSIGVVLDLLRADFPDVTISKIRFLEAEGLVTPERTASG Mvan_3134|M.vanbaalenii_PYR-1 MTQPDTPALNGMSIGVVLDLLRGDFPDVTISKIRFLEAEGLVTPERTASG MSMEG_3646|M.smegmatis_MC2_155 MTHPDRSAPAGMSIGAVLDLLRSDFPDVTISKIRFLEAEGLVTPERTASG Mb1859|M.bovis_AF2122/97 MSAPDSPALAGMSIGAVLDLLRPDFPDVTISKIRFLEAEGLVTPRRASSG Rv1828|M.tuberculosis_H37Rv MSAPDSPALAGMSIGAVLDLLRPDFPDVTISKIRFLEAEGLVTPRRASSG MLBr_02075|M.leprae_Br4923 MSAPDSPALVGMSIGAVLDLLRSDFPDVTISKIRFLEAEGLVTPQRSASG MMAR_2705|M.marinum_M MSAPDSPALAGMSIGAVLELLRPDFPDVTISKIRFLEAEGLVTPQRAASG MUL_3047|M.ulcerans_Agy99 MSARDSPALAGMSIGAVLELLRPDFPDVTISKIRFLEAEGLVTPQRAASG MAV_2887|M.avium_104 MSAPDSSALAGMSIGAVLELLRPDFPDVTISKIRFLEAEGLVTPQRAASG TH_1127|M.thermoresistible__bu MSAPDTPALTGMSIGAVLDLLRPEFPDVTISKIRFLESEGLVTPMRTASG MAB_2404|M.abscessus_ATCC_1997 MTAPDRPALTGMSIGSVLDLLRPEFPDVTISKIRFLESEGLVTPSRSASG *: * .. ***** **:*** :*************:****** *::** Mflv_3401|M.gilvum_PYR-GCK YRRFTAYDCARLRFILTAQRDNYLPLKVIKSQLDALPDGELPQTVSPYGT Mvan_3134|M.vanbaalenii_PYR-1 YRRFTAYDCARLRFILTAQRDQYLPLKVIKAQLDAQPDGELPQFGSAYAT MSMEG_3646|M.smegmatis_MC2_155 YRRFTAYDCARLRFILTAQRDQYLPLKVIKAQLDALPDGELPQTGSAYAV Mb1859|M.bovis_AF2122/97 YRRFTAYDCARLRFILTAQRDHYLPLKVIRAQLDAQPDGELPPFGSPYVL Rv1828|M.tuberculosis_H37Rv YRRFTAYDCARLRFILTAQRDHYLPLKVIRAQLDAQPDGELPPFGSPYVL MLBr_02075|M.leprae_Br4923 YRRFTAYDCARLRFILTAQRDHYLPLKVIRAQLDAQPDGELPSFGSPYVA MMAR_2705|M.marinum_M YRRFTAYDCARLRFILTAQRDHYLPLKVIRSELDAQPDGQLPAIGSPYGV MUL_3047|M.ulcerans_Agy99 YRRFTAYDCARLRFILTAQRDHYLPLKVIRSELDAQPDGQLPAIGSPYGV MAV_2887|M.avium_104 YRRFTAYDCARLRFILTAQRDHYLPLKVIRAQLDAQPDGELPAFNTPYTA TH_1127|M.thermoresistible__bu YRRFTAYDCARLRFILTAQRDQYLPLKVIKAQLDAMPDGELPELPSVYPV MAB_2404|M.abscessus_ATCC_1997 YRRFSAYDAERLRFILTAQRDHYLPLKVIKEQLDAQPDGALPDLAGFSGG ****:***. ***********:*******: :*** *** ** Mflv_3401|M.gilvum_PYR-GCK PRLVSVG-------QQTASEPAPAPS---PAQVRLSRDDLLERSGVSDDL Mvan_3134|M.vanbaalenii_PYR-1 PRLVSVG-------GETADVTDVPAG---PTQVRLSREDLLERSEVGGEL MSMEG_3646|M.smegmatis_MC2_155 PRLVPVGDGGADGGTTTADGVSRAASGMAPTQIRLTREDLLQRSGVDETL Mb1859|M.bovis_AF2122/97 PRLVPVAGDSAG----GVGSDTASVS---LTGIRLSREDLLERSEVADEL Rv1828|M.tuberculosis_H37Rv PRLVPVAGDSAG----GVGSDTASVS---LTGIRLSREDLLERSEVADEL MLBr_02075|M.leprae_Br4923 PRLFSVTGGPGAGVGSGVGSDIPAVS---PAGVRLSREDLLDRSGVADDL MMAR_2705|M.marinum_M PKLVSVAGNSAGTAGPDGGSDTGAVA---PARVRLSREDLIERSGVDDEL MUL_3047|M.ulcerans_Agy99 PKLVSVAGNSAGTAGPDGGSDTGAVA---PARVRLSREDLIERSGVDDEL MAV_2887|M.avium_104 PRLVSVAGTDAG-ANAGLGSDTSAVA---PAHVRLSREELLRRAGVDDEL TH_1127|M.thermoresistible__bu PRLVSADG--------ASGANAAGVA---PTQVRLSREDLLARSGVDESL MAB_2404|M.abscessus_ATCC_1997 PRLFAITDG-----DDTNGVARQGFP--PSRPTRLSREDLLSRSGADEVL *:*.. . **:*::*: *: . * Mflv_3401|M.gilvum_PYR-GCK LTSLIRAGVITPIFKGAGTTLFDEHSVVIAQCARALADYGVEPRHLRAFR Mvan_3134|M.vanbaalenii_PYR-1 LNALIKAGIIT---TGPGG-FFDEHSVVIAQCARALADYGVEPRHLRAFR MSMEG_3646|M.smegmatis_MC2_155 LGALIKNGVITP---GKGG-LFDEHSVVIAQCAKALEEYGVEPRHLRAFR Mb1859|M.bovis_AF2122/97 LTALLKAGVITT---GPGG-FFDEHAVVILQCARALAEYGVEPRHLRAFR Rv1828|M.tuberculosis_H37Rv LTALLKAGVITT---GPGG-FFDEHAVVILQCARALAEYGVEPRHLRAFR MLBr_02075|M.leprae_Br4923 LTALLKAGVITT---GPGG-FFDEHAIVILQCARALSEYGVEPRHLRAFR MMAR_2705|M.marinum_M LSAVLKAGVITT---GPGG-FFDEHAVVILQCARALSEYGVEPRHLRAFR MUL_3047|M.ulcerans_Agy99 LSAVLKAGVITT---GPGG-FFDEHAVVILQCARALSEYGVEPRHLRAFR MAV_2887|M.avium_104 LTALLKAGIITT---GPAG-FFDEHAVVILQCARALSDYGVEPRHLRAFR TH_1127|M.thermoresistible__bu LSGLVKAGVIKP---GPGG-FFDEHSVVIAQCARALAEYGVEPRHLRAFR MAB_2404|M.abscessus_ATCC_1997 LTSLIKAGIITS---GPGG-FFDEYTVLIVQCAAELADYGVEPRHLRTFR * .::: *:*. * . :***::::* *** * :*********:** Mflv_3401|M.gilvum_PYR-GCK SAADRQSDLIAQIAGPVGKGGKAGARDRADDLAREVAALAITLHTSLIKS Mvan_3134|M.vanbaalenii_PYR-1 SAADRQSDLIAQIAGPVVKGGKAGARDRADDLAREVAALAITLHTSLIKS MSMEG_3646|M.smegmatis_MC2_155 SAADRQSDLIAQIAGPVVKAGKAGARDRADDLAREVAALAITLHTSLIKS Mb1859|M.bovis_AF2122/97 SAADRQSDLIAQIAGPLVKAGKAGARDRADDLAREVAALAITLHTSLIKS Rv1828|M.tuberculosis_H37Rv SAADRQSDLIAQIAGPLVKAGKAGARDRADDLAREVAALAITLHTSLIKS MLBr_02075|M.leprae_Br4923 SAADRQSDLIVQIAGPIVKAGKAGARDRADDLAREVAALAITLHTSLIKS MMAR_2705|M.marinum_M SAADRQSDLIAQIAGPLVKADKAGARDRADDLAREVAALAITLHTSLIKS MUL_3047|M.ulcerans_Agy99 SAADRQSDLIAQIAGPLVKADKAGARDRADDLAREVAALAITLHTSLIKS MAV_2887|M.avium_104 SAADRQSDLIAQIAGPVGKAGKAGARDRADDLAREVAALAITLHTSLIKS TH_1127|M.thermoresistible__bu SAADRQSDLIAQIAGPLVKTDKAGARDRADDLAREVAALAITLHTALIKS MAB_2404|M.abscessus_ATCC_1997 SAVDRETDLIAQIVGPTVKANKAGARDRADDLIREVAALSIALHGAMIKS **.**::***.**.** * .*********** ******:*:** ::*** Mflv_3401|M.gilvum_PYR-GCK AVRDVLDR Mvan_3134|M.vanbaalenii_PYR-1 AVRDVLDR MSMEG_3646|M.smegmatis_MC2_155 AVRDVLDR Mb1859|M.bovis_AF2122/97 AVRDVLHR Rv1828|M.tuberculosis_H37Rv AVRDVLHR MLBr_02075|M.leprae_Br4923 AVRGVLHR MMAR_2705|M.marinum_M AVRDVLHR MUL_3047|M.ulcerans_Agy99 AVRDVLHR MAV_2887|M.avium_104 AVRDVLDR TH_1127|M.thermoresistible__bu AVRDVLDR MAB_2404|M.abscessus_ATCC_1997 AVRGVLDR ***.**.*