For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VGAPSACGGGSALMTLPEKNLGYKPETETNRRLRWMVGGVTILTFMALLYLVELIDQLTRHSLDNNGIRL LKTDVLWGISFAPVLHANWQHLVANTIPLLVLGFLIALAGLSRFIWVTAMVWIFGGSATWLIGNMGSSFG PTDHIGVSGLIFGWLAFLLVFGLFVRRGWDIIGCMVLFAYGGVLLGVMPVLGRCGGVSWQGHLCGAISGV VAAYLLSAPERKTRALKEAGTDSPRLKT
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. leprae Br4923 | MLBr_01171 | - | - | 100% (238) | hypothetical protein MLBr_01171 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1372 | - | 5e-95 | 73.89% (226) | integral membrane protein |
M. gilvum PYR-GCK | Mflv_2355 | - | 3e-69 | 62.07% (203) | rhomboid family protein |
M. tuberculosis H37Rv | Rv1337 | - | 5e-95 | 73.89% (226) | integral membrane protein |
M. abscessus ATCC 19977 | MAB_1481 | - | 1e-61 | 58.10% (210) | hypothetical protein MAB_1481 |
M. marinum M | MMAR_4059 | - | 3e-92 | 74.88% (215) | integral membrane protein |
M. avium 104 | MAV_1554 | - | 2e-87 | 69.68% (221) | rhomboid family protein |
M. smegmatis MC2 155 | MSMEG_4904 | - | 5e-78 | 63.68% (212) | rhomboid family protein |
M. thermoresistible (build 8) | TH_1018 | - | 2e-65 | 60.10% (203) | PROBABLE INTEGRAL MEMBRANE PROTEIN |
M. ulcerans Agy99 | MUL_4822 | - | 2e-06 | 30.67% (150) | serine protease |
M. vanbaalenii PYR-1 | Mvan_4290 | - | 3e-70 | 61.72% (209) | rhomboid family protein |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_2355|M.gilvum_PYR-GCK ---------------MTGTGGYPLQPAGPAKR------PVWVVGGVTVVS Mvan_4290|M.vanbaalenii_PYR-1 ---------------MTGIGGHPGIPAEPKKR------PAWMVGGLTVLS MAB_1481|M.abscessus_ATCC_1997 ---------------MTGYGGGPDYPGSPSSRRERSGRPQWVTGGVLVAS TH_1018|M.thermoresistible__bu -----------------------------------------VTGGLTILT Mb1372|M.bovis_AF2122/97 MGMTPRRKRRGGAVQITRPTGRPRTPTTQTTKR-----PRWVVGGTTILT Rv1337|M.tuberculosis_H37Rv MGMTPRRKRRGGAVQITRPTGRPRTPTTQTTKR-----PRWVVGGTTILT MMAR_4059|M.marinum_M ---------------MAR---HPRTPATQPEER-----PRWVTGGATILT MLBr_01171|M.leprae_Br4923 MGA-PSACGGGSALMTLPEKNLGYKPETETNRR-----LRWMVGGVTILT MAV_1554|M.avium_104 MG-----------------KTTGRAPAAQTKKR-----STAVAGATTIVT MSMEG_4904|M.smegmatis_MC2_155 -------------------MTLPTGPAPKKNKS-----PAWKTGGITILT MUL_4822|M.ulcerans_Agy99 --MRSGAVGHQCVECVRADARTVRQPRTQFGGR------QRSVTPVVTFS . : Mflv_2355|M.gilvum_PYR-GCK FVVLLWLIELFDTLTGHRLDDNGIRP--LETDGLTGILVAPLLHSNWEHL Mvan_4290|M.vanbaalenii_PYR-1 FVVLLWVIELFDSLTGHRLDGNGIRP--LETDGLAGILFAPLLHSNWEHL MAB_1481|M.abscessus_ATCC_1997 FVALLYVVEGIDSVTGHRLDENGIRP--LETDGLDGILFAPLLHANWGHL TH_1018|M.thermoresistible__bu FVALLYVIEAYDAVTGNQLDQNGIRP--LDTDGLTGVLLAPLLHGGWEHL Mb1372|M.bovis_AF2122/97 FVALLYLVELIDQLSGSRLDVNGIRP--LKTDGLWGVIFAPLLHANWHHL Rv1337|M.tuberculosis_H37Rv FVALLYLVELIDQLSGSRLDVNGIRP--LKTDGLWGVIFAPLLHANWHHL MMAR_4059|M.marinum_M FVALLYLVELIDQLTRHSLDLNGIRP--LQTDGLWGIIFAPLLHANWAHL MLBr_01171|M.leprae_Br4923 FMALLYLVELIDQLTRHSLDNNGIRL--LKTDVLWGISFAPVLHANWQHL MAV_1554|M.avium_104 FVALLYLVELIDQLTRHALDVHGIRP--QRLDGLWGILFAPVLHESWQHL MSMEG_4904|M.smegmatis_MC2_155 FVALLYVVELADQLSGGRLDRNGIRP--LETDGLWGVLFAPLLHANWEHL MUL_4822|M.ulcerans_Agy99 LIAVSVLVFVLQLVVAGLGPHLALWPPAVADGQLYRLVTSAFMHYGRLHL ::.: :: : : .: . * : :..:* . ** Mflv_2355|M.gilvum_PYR-GCK IANTGPALVLG-FLMTLAGLSRFIFATAIIWFAGGLGTWLIGNVGAPT-Y Mvan_4290|M.vanbaalenii_PYR-1 LANTVPALVLG-FLMTLAGLSRFIFATAIVWIVGGVGTWLIGNIGAHCPY MAB_1481|M.abscessus_ATCC_1997 VANTVPALVLG-FLAAAAGVGRFLLATAIIWLLGGVGTWLIGNIGLPY-- TH_1018|M.thermoresistible__bu MANTGPALVLG-FLMTLAGMSRFIFATAIIWILGGLGTWLIGDLGAPAG- Mb1372|M.bovis_AF2122/97 MANTIPLLVLG-FLMTLAGLSRFVWATAIIWILGGLGTWLIGNVGSSCG- Rv1337|M.tuberculosis_H37Rv MANTIPLLVLG-FLMTLAGLSRFVWATAIIWILGGLGTWLIGNVGSSCG- MMAR_4059|M.marinum_M MANTVPLLVLG-FLMTLAGLARFVWATAIVWILGGFGTWLIGNVGSSCG- MLBr_01171|M.leprae_Br4923 VANTIPLLVLG-FLIALAGLSRFIWVTAMVWIFGGSATWLIGNMGSSFG- MAV_1554|M.avium_104 MANTVPLLVLG-FLMTLAGLARFVWATVIIWIVGGFGTWLIGNVGSSCG- MSMEG_4904|M.smegmatis_MC2_155 MANTVPALVLG-FLVTLAGLARFVWATAIIWILGGIGTWLIGDVGGCPL- MUL_4822|M.ulcerans_Agy99 VFNMWALYVVGPPLEMWLGRLRFGGLYALSALGGSVLVYLIAPLNTATA- : * . *:* * * ** .: : *. .:**. :. Mflv_2355|M.gilvum_PYR-GCK NGVIVETNHIGASGLIFGWLTFLIVFGFFTRTVWEIVVGVVVFFIYGGIL Mvan_4290|M.vanbaalenii_PYR-1 VGVRCETNHIGASGLIFGWLAFLIVFGFFTRKVWEIVVGVVVLFVYGSVL MAB_1481|M.abscessus_ATCC_1997 -----ETNHIGASGLIFGWLTYVIVRGFFNRSVGQILIGAVVLVLYGGVL TH_1018|M.thermoresistible__bu ----VSTVHIGASGLIFGWLTFLIVFGFFTRKVWQITVGIMVLLIYGSIL Mb1372|M.bovis_AF2122/97 -----PTDHIGASGLIFGWLAFLLVFGLFVRKGWDIVIGLVVLFVYGGIL Rv1337|M.tuberculosis_H37Rv -----PTDHIGASGLIFGWLAFLLVFGLFVRKGWDIVIGLVVLFVYGGIL MMAR_4059|M.marinum_M -----PTDHIGASGLIFGWLAFLLVFGLFVRKVWDIIIGLAVLFFYGGIL MLBr_01171|M.leprae_Br4923 -----PTDHIGVSGLIFGWLAFLLVFGLFVRRGWD-IIGCMVLFAYGGVL MAV_1554|M.avium_104 -----PTDHIGASGLIFGWLAFLLVFGIFVRRVRDIIIGLAVMFAYGGVL MSMEG_4904|M.smegmatis_MC2_155 -----PTNHIGASGLIFGWLTFLLVFGWFTRNAWQIVVGILVLLVYGGIL MUL_4822|M.ulcerans_Agy99 ----------GASGAIFGLFGATFVVAKRLNLDIRWVVALIAINLAITFV *.** *** : :* . . :. .: .: Mflv_2355|M.gilvum_PYR-GCK LGVLP--GTFG-VSWQGHLCGALAG--VLAAYLLSGPERK---------- Mvan_4290|M.vanbaalenii_PYR-1 LGVLP--GTPG-VSWQGHLSGAVAG--VLAAYLLSGPERK---------- MAB_1481|M.abscessus_ATCC_1997 WGVLP--GQFG-VSWQGHLSGAVAG--VLAAYWLSGRERK---------- TH_1018|M.thermoresistible__bu LGVLP--GTFG-VSWQGHLCGAIAG--VIAAYVLSGPERR---------- Mb1372|M.bovis_AF2122/97 LGAMPVLGQCGGVSWQGHLSGAVAG--VVAAYLLSAPERK---------- Rv1337|M.tuberculosis_H37Rv LGAMPVLGQCGGVSWQGHLSGAVAG--VVAAYLLSAPERK---------- MMAR_4059|M.marinum_M LGALPRLGVCGGVSWQGHLCGALAG--VVAAYFLSAPERK---------- MLBr_01171|M.leprae_Br4923 LGVMPVLGRCGGVSWQGHLCGAISG--VVAAYLLSAPERK---------- MAV_1554|M.avium_104 LGAMPVLGLCGGVSWQGHLCGAIAG--VLAAYLLSEPERK---------- MSMEG_4904|M.smegmatis_MC2_155 WGAVPVLNGCGGVSWQGHLCGAIAG--VVAAYVLAGPERK---------- MUL_4822|M.ulcerans_Agy99 APAVG----SQLISWQGHVGGLITGALVAAAYVYAPRERRNFIQGAVTLT .: :*****: * ::* * *** : **: Mflv_2355|M.gilvum_PYR-GCK ----------TRALR-RPVRPPSLNT- Mvan_4290|M.vanbaalenii_PYR-1 ----------ARERR-KATN-PYLTT- MAB_1481|M.abscessus_ATCC_1997 ----------VQAAR-GPGVPPRLTP- TH_1018|M.thermoresistible__bu ----------ARALR-RPVQPPRLTR- Mb1372|M.bovis_AF2122/97 ----------ARALKRAGARSGHPKL- Rv1337|M.tuberculosis_H37Rv ----------ARALKRAGARSGHPKL- MMAR_4059|M.marinum_M ----------ARELKKAGERPSSPKT- MLBr_01171|M.leprae_Br4923 ----------TRALKEAGTDSPRLKT- MAV_1554|M.avium_104 ----------GRSGRKTGAVAPRPKT- MSMEG_4904|M.smegmatis_MC2_155 ----------ARDSRKRSR--PYLTS- MUL_4822|M.ulcerans_Agy99 VAVAFVVLIWWRTSELLAMFGGHLNLG : . .