For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
RGQGHQIFVDELARFAAAEADPRVTAIAQRAAAPLRVVVRGRRGVGRRTLARALDRAGRATGIAVTTDAA DVVVHVTAEVAKPEDTQAISTARAAGHPVLAVLSKADLVGSLSGRGGDGPIAAARARCADLSALIGVPIR PAIGLLAVAALDDLGDDLWAALRTLAADPAACLDGSITGFLDAGVDVPAAARERLLDTLDLFGTALAIAA IRRGAGPAQLRTMLRRISGVDAVLAEIGALGAEVRYRRVLGAVAELEALAVGGAALGERISGFLSRDDAV VARMAAALDMAGDMAGEVAGEAAPGDPSGHLARAVRWQRYSRASGSDLHRACGADIARGSLRLWSQACAT LPGERPVELPVEREDPA*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. avium 104 | MAV_4965 | - | - | 100% (368) | hypothetical protein MAV_4965 |
M. avium 104 | MAV_1877 | - | 1e-05 | 28.30% (311) | acyl-CoA dehydrogenase |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0215 | - | 1e-103 | 60.72% (359) | hypothetical protein Mb0215 |
M. gilvum PYR-GCK | Mflv_0453 | - | 1e-53 | 43.07% (339) | hypothetical protein Mflv_0453 |
M. tuberculosis H37Rv | Rv0209 | - | 1e-103 | 60.45% (359) | hypothetical protein Rv0209 |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_4505c | - | 8e-41 | 36.07% (366) | hypothetical protein MAB_4505c |
M. marinum M | MMAR_0449 | - | 2e-92 | 55.04% (367) | hypothetical protein MMAR_0449 |
M. smegmatis MC2 155 | MSMEG_0253 | - | 2e-51 | 43.39% (348) | hypothetical protein MSMEG_0253 |
M. thermoresistible (build 8) | TH_2528 | - | 2e-26 | 48.41% (157) | PUTATIVE - |
M. ulcerans Agy99 | MUL_1099 | - | 1e-92 | 55.04% (367) | hypothetical protein MUL_1099 |
M. vanbaalenii PYR-1 | Mvan_0199 | - | 8e-54 | 46.11% (321) | hypothetical protein Mvan_0199 |
CLUSTAL 2.0.9 multiple sequence alignment Mb0215|M.bovis_AF2122/97 -----MRGQGHQIFVDELARFATSSAD------QRVVAIAQRAAEPLRVA Rv0209|M.tuberculosis_H37Rv -----MRGQGHQIFVDELARFATSSAD------QRVVAIAQRAAEPLRVA MAV_4965|M.avium_104 -----MRGQGHQIFVDELARFAAAEAD------PRVTAIAQRAAAPLRVV MMAR_0449|M.marinum_M ------MQTGHQAFVDELTCLAASTAD------QRIRSIAERAARPLRVA MUL_1099|M.ulcerans_Agy99 MGVMVVMQTGHQVFVDELTCLAASTAD------QRIRAIAEWAARPLRVA Mflv_0453|M.gilvum_PYR-GCK ----------MPIFTEVLAQFVADR--------PALAAVDARLRAPLSVT Mvan_0199|M.vanbaalenii_PYR-1 --------------------------------------MEKRLRAPHRVA MSMEG_0253|M.smegmatis_MC2_155 -------MEGRQMFAAELKRFAGCVGDGNRD--PRLAKISARVCAPVGVS TH_2528|M.thermoresistible__bu -----------------LIRFAERTGD------AAVPAIIDRLTAPVTVA MAB_4505c|M.abscessus_ATCC_199 ------MTRGFEVFRATLERFATRPEIRQIHGGQRIHDVVVRAGDPLRVA : * * Mb0215|M.bovis_AF2122/97 VRGRPGVGCRTVARAL-------QGAGSSSGMTVTPQARAADSDVDLVVY Rv0209|M.tuberculosis_H37Rv VRGRPGVGCRTVARAL-------QGAGSSSGMTVTPQARAADSDVDLVVY MAV_4965|M.avium_104 VRGRRGVGRRTLARAL-------DRAGRATGIAVTTDA------ADVVVH MMAR_0449|M.marinum_M VRGRRGVGRNTLVRAL-------DGAGSAAGLAATSGG----DPADVVVY MUL_1099|M.ulcerans_Agy99 VRGRRGVGRNTLARAL-------DGAGSAAGLAATSGG----DPADVVVY Mflv_0453|M.gilvum_PYR-GCK VQGRAGVGCRTVAGAL-------AAAGVRIARSSTAAD--------VHVV Mvan_0199|M.vanbaalenii_PYR-1 VRGRRGVGRNAVAWAF-------TAAGVRVVTDIGSAD--------IQVV MSMEG_0253|M.smegmatis_MC2_155 VHGRRGVGVTTVAEAL-------GANGVAVR-DDGPGE--------LAVL TH_2528|M.thermoresistible__bu VRGRAGVGRRTVAGAL-------SAAG--VPVTADAAD--------VTVL MAB_4505c|M.abscessus_ATCC_199 VRGRAGVGVTSVIGALGLTLPADEGPGHALIEVPIAGADPEPLVADVDVV *:** *** :: *: * . : * Mb0215|M.bovis_AF2122/97 VTVEVVKPEDREAIAATR---RPVVAVLNKADLAGPLSG---AGPIVMAQ Rv0209|M.tuberculosis_H37Rv VTVEVVKPEDREAIAATR---RPVVAVLNKADLAGPLSG---AGPIVMAQ MAV_4965|M.avium_104 VTAEVAKPEDTQAISTARAAGHPVLAVLSKADLVGSLSGRGGDGPIAAAR MMAR_0449|M.marinum_M ALAEVVKPEDRAGIAVLEPTERPVLAVLTMADKT-DVFGFAGAGPMAGAL MUL_1099|M.ulcerans_Agy99 ALAEVVKPEDRAGIAVLEPTERPVLAVLTMADKT-DVVGFAGAVPMAGAL Mflv_0453|M.gilvum_PYR-GCK AVAETLKPEDRHLVRADGP----AVVVLTKADLAGRVHG----GPLAHAE Mvan_0199|M.vanbaalenii_PYR-1 VTAETLKPEDRAMLRVSIP----TLVVLNKADLAGREPG----GPLAAAT MSMEG_0253|M.smegmatis_MC2_155 VTVEVLKPEDLTLADALRARGADVLVVLNKADLVGRAPD----GSLAAAH TH_2528|M.thermoresistible__bu VTAETLKPEDRAVLAGLDG---PALVVLNKADRTGWGGA----GPIDQAR MAB_4505c|M.abscessus_ATCC_199 VFAEALKPEDRAVLEASIA---PKVLILNKADLTDPGAAR---GPWTAAV . .*. **** : :*. ** . . * Mb0215|M.bovis_AF2122/97 ARCAQFSTLLGVPMESMIGLLAVAALDDLDDTLRAALRALAAHPDGFDAL Rv0209|M.tuberculosis_H37Rv ARCAQFSTLLGVPMESMIGLLAVAALDDLDDTLRAVLRALAAHPDGFDAL MAV_4965|M.avium_104 ARCADLSALIGVPIRPAIGLLAVAALDDLGDDLWAALRTLAADPA--ACL MMAR_0449|M.marinum_M QRCELLSTLAGVPVEPISALLAVAALDDLDGRSWYALRALAAHPAAGAAL MUL_1099|M.ulcerans_Agy99 QRCELLSTLAGVPVEPISALLAVAALDDLDERSWCALRALAAHPAAGAAL Mflv_0453|M.gilvum_PYR-GCK RTATELTASTGVPVVPMVALLAGVEIDDD---LFEALRTLTTAPADMTSV Mvan_0199|M.vanbaalenii_PYR-1 RRAAQIAAAAGVPVVPMIAHLASVELDEQ---DIAVLRTLAAIPVDMTST MSMEG_0253|M.smegmatis_MC2_155 HRAQQLRERTGLPVVPMVGLLARATLSPH---LVEALRLLATTPADLTST TH_2528|M.thermoresistible__bu RRAGELQTLTGVPTVPLVGLLAAVRLDAG---LTTALQVLARETSDIRXX MAB_4505c|M.abscessus_ATCC_199 SRCAEYRAETRVPTLPLSAHVPLVSLDDG---MVEALKLMVENPADTSSV . :* . . :. . :. .*: :. . Mb0215|M.bovis_AF2122/97 DRAVAGFLAAALPVPTEVRLRLLDTLDLFGIALGMAAFRPGRPSRTPAQL Rv0209|M.tuberculosis_H37Rv DRAVAGFLAAALPVPTEVRLRLLDTLDLFGIALGMAAFRPGRPSRTPAQL MAV_4965|M.avium_104 DGSITGFLDAGVDVPAAARERLLDTLDLFGTALAIAAIRRG---AGPAQL MMAR_0449|M.marinum_M DGSHAGFLSADLGVPTGQRLRLLESLDLFGVAIAIEALRRG---AARTQV MUL_1099|M.ulcerans_Agy99 DGSHAGFLSADLGVPTGQRLRLLESLDLFGVAIAIEALRRG---AARTQV Mflv_0453|M.gilvum_PYR-GCK D----AFVAGDHAVPASVRRALVARLDRFGIAHAVLAVADG---ASRAEV Mvan_0199|M.vanbaalenii_PYR-1 D----AFVAADHEVPAAVRERLLARLDRFGLAHAVLACADG---ATAETL MSMEG_0253|M.smegmatis_MC2_155 E----AFLADPHPVAQATRTELLTTLDRFGIVHACRELSRDP-NADAAVL TH_2528|M.thermoresistible__bu X------------TATATAPRLRS-----GPIRPIRPCGRS---GRRSKR MAB_4505c|M.abscessus_ATCC_199 D----AFVTCTHDVPVAMRQRILHELDLYPMGCAIGALRQVP-SLAAPGL .. : Mb0215|M.bovis_AF2122/97 RTLLRRVSGVDAVIDKVTAAGSEVRYRRLLDAVAELEALAAQAKEIGGPI Rv0209|M.tuberculosis_H37Rv RTLLRRVSGVDAVIDKVTAAGSEVRYRRLLDAVAELEALAAQAKEIGGPI MAV_4965|M.avium_104 RTMLRRISGVDAVLAEIGALGAEVRYRRVLGAVAELEALAVGGAALGERI MMAR_0449|M.marinum_M RALLRKISGIDAVVANAVAAGAGVRYGRVLEAVAALEVLAVAD----EQV MUL_1099|M.ulcerans_Agy99 RALLRKISGIDAVVANAVAAGAGVRYGRVLEAVAALEVLAVAD----EQV Mflv_0453|M.gilvum_PYR-GCK ASSLHALSGADQVLDVLAGTAAEVGYRRVRSALDELTRLAVETGD--DGL Mvan_0199|M.vanbaalenii_PYR-1 TGALRALSGADRVLECVRAAAAEVRYRRVCAAVDELHRLAAETRD--DGL MSMEG_0253|M.smegmatis_MC2_155 SAALRRLGETDRVLAALDALAAPRRYRRIERALTELQAVGGES------V TH_2528|M.thermoresistible__bu RCSIR--------------------------------------------- MAB_4505c|M.abscessus_ATCC_199 TSLLRDLSGIDAVVSAIREAIAQGWYRRMRVVLAELRKIGVTGVLP-MQI :: Mb0215|M.bovis_AF2122/97 GEFLRDDDTVLARMAAAVDVALAVGLDVG----PLDDP--AAHLPRAVRW Rv0209|M.tuberculosis_H37Rv GEFLRDDDTVLARMAAAVDVALAVGLDVG----PLDDP--AAHLPRAVRW MAV_4965|M.avium_104 SGFLSRDDAVVARMAAALDMAGDMAGEVAGE-AAPGDP--SGHLARAVRW MMAR_0449|M.marinum_M SEFLAGEAAVLARMSAALDAASAWGLDPFGAAVPPDDP--GAQLQRALRW MUL_1099|M.ulcerans_Agy99 SEFLAGEAAVLARMSAALDAASTWGLDPFGAAVPPDDP--GAQLQRALRW Mflv_0453|M.gilvum_PYR-GCK WSFLTGDALVIAAMAAAVDLMQAAGLRVD----PRDDA--DAHLGRALRW Mvan_0199|M.vanbaalenii_PYR-1 AAFLASDEVVVAVMAAAVDAMEAAGLRVD----RWDDR--EAHERRAVRW MSMEG_0253|M.smegmatis_MC2_155 GRFLAADTTVVAVMDAALEVMRAAGVVVP----SRAACGRDAHLRRARFW TH_2528|M.thermoresistible__bu ------------------------------------------------RW MAB_4505c|M.abscessus_ATCC_199 DSFVNSDDVVVAAMRCAVDAATAAGIPVD----LSDHP--EDHRYRAERW * Mb0215|M.bovis_AF2122/97 HRYSLDNG--------DMHRTCGADIARGSLRLWSLAGG---------MP Rv0209|M.tuberculosis_H37Rv HRYSLDNG--------DMHRTCGADIARGSLRLWSLAGG---------MP MAV_4965|M.avium_104 QRYSRASGS-------DLHRACGADIARGSLRLWSQACATLPGERPVELP MMAR_0449|M.marinum_M RRHRSQRGPAAESPDSDLRRWCGADIVRGSLRLWSRAAG----SLACAGP MUL_1099|M.ulcerans_Agy99 RRHRSQRGPGAESPDSDLRRWCGADIVRGSLRLWSRAAG----SLACAGP Mflv_0453|M.gilvum_PYR-GCK RRYAHTPMN-------ALHQQCAADIARGSLRLLGRSR------------ Mvan_0199|M.vanbaalenii_PYR-1 HRYAAGPVT-------EMHRRCAADITRGSLRLLGRRR------------ MSMEG_0253|M.smegmatis_MC2_155 WRYCRGPVG-------ALHGRCAAAIARGSLRLAGLDTE----------- TH_2528|M.thermoresistible__bu P-------------------------ARCSTR------------------ MAB_4505c|M.abscessus_ATCC_199 QRFAEGPVN-------STYAALGTDIARGSLRLWRRAGGRA--------- .* * * Mb0215|M.bovis_AF2122/97 LHRYRKSS Rv0209|M.tuberculosis_H37Rv LHRYRKSS MAV_4965|M.avium_104 VEREDPA- MMAR_0449|M.marinum_M PEGGRPR- MUL_1099|M.ulcerans_Agy99 PEGGRPR- Mflv_0453|M.gilvum_PYR-GCK -------- Mvan_0199|M.vanbaalenii_PYR-1 -------- MSMEG_0253|M.smegmatis_MC2_155 -EAARR-- TH_2528|M.thermoresistible__bu -------- MAB_4505c|M.abscessus_ATCC_199 --------