For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. avium 104 MAV_4750 (-)

annotation: extracellular solute-binding protein, family protein 3
coordinates: 4873136 - 4874140
length: 334

VAEAERVPMTAGLPLLRRACTALAAVLVAAGCGHTESLRVASVPTLPPPTPVGMEQLPPQPPLPPDGPDQ
NCDLTASLRPFPTKAEADAAVADIRARGRLIVGLDIGSNLFSFRDPITGEITGFDVDIAGEIARDIFGAP
SHVEYRILSSDERVTALQRGEVDVVVKTMTITCDRRKQVNFSTVYLDANQRILAPRDSPITKVSDLSGKR
VCVAKGTTSLHRIRQIDPPPIVVSVVNWADCLVAMQQREIDAVSTDDSILAGLVEEDPYLHIVGPNMATQ
PYGIGINLNNTGLVRFVNGTLERIRRDGTWNTLYRKWLTVLGPAPAPPTPRYLD
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. avium 104MAV_4750--100% (334)extracellular solute-binding protein, family protein 3
M. avium 104MAV_0059-3e-0824.07% (216) amino acid ABC transporter, permease protein,
M. avium 104MAV_2435-2e-0735.24% (105) sulfonate binding protein

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb0419cglnH1e-15883.90% (323) glutamine-binding lipoprotein
M. gilvum PYR-GCKMflv_0201-1e-13674.29% (319) extracellular solute-binding protein
M. tuberculosis H37RvRv0411cglnH1e-15883.90% (323) glutamine-binding lipoprotein
M. leprae Br4923MLBr_00303glnH1e-15580.88% (319) putative glutamine-binding protein
M. abscessus ATCC 19977MAB_4223-1e-11767.51% (317) glutamine-binding protein GlnH
M. marinum MMMAR_0714glnH1e-15683.08% (325) glutamine-binding lipoprotein GlnH
M. smegmatis MC2 155MSMEG_0787-1e-13071.43% (322) extracellular solute-binding protein, family protein 3
M. thermoresistible (build 8)TH_2308glnH1e-13671.08% (325) PROBABLE GLUTAMINE-BINDING LIPOPROTEIN GLNH (GLNBP)
M. ulcerans Agy99MUL_2809glnH1e-15783.08% (325) glutamine-binding lipoprotein GlnH
M. vanbaalenii PYR-1Mvan_0704-1e-13775.96% (312) extracellular solute-binding protein

CLUSTAL 2.0.9 multiple sequence alignment


MAV_4750|M.avium_104                MAEAERVPMTAGLPLLRRACT---ALAAVLVAAGCGHTESLRVASVPTLP
MLBr_00303|M.leprae_Br4923          --------MMTRQFKIQRACS---VLATAMMLAACGHAELLTVASMPTLP
Mb0419c|M.bovis_AF2122/97           ---------MTRRALLARAAAPLAPLALAMVLASCGHSETLGVEATPTLP
Rv0411c|M.tuberculosis_H37Rv        ---------MTRRALLARAAAPLAPLALAMVLASCGHSETLGVEATPTLP
MMAR_0714|M.marinum_M               ---------MRRLPGLRRAASALAVLALVITLDGCGHSEPLKVESTPTLP
MUL_2809|M.ulcerans_Agy99           ---------MRRLPGLRRAASALAVLALVITLDGCGHSEPLKVESTPTLP
Mflv_0201|M.gilvum_PYR-GCK          ----------MMKRALRRV---GAALAAAVMLSGCAQALPVVPTPTVTLA
Mvan_0704|M.vanbaalenii_PYR-1       -----MSACAKKKQPLMKVSAWGALLAGVLVLGGCAQTSPVVPTPSVTLA
MSMEG_0787|M.smegmatis_MC2_155      -----------MKRLLMLL----VSTLTAMSLVGCSQAAPALNLPSLTLA
TH_2308|M.thermoresistible__bu      ----MDIEVRTMGTPVKRL--VAVLGVLGMLLTGCGESNSVAPAPEVVLN
MAB_4223|M.abscessus_ATCC_1997      ---------MTRYAMQGTARRFGALAFVAALLAGCSTPENSTPLPQLTVP
                                                                     .*. .      .  .: 

MAV_4750|M.avium_104                PPTPVGMEQLPPQPPLPPDGPDQNCDLTASLRPFPTKAEADAAVADIRAR
MLBr_00303|M.leprae_Br4923          PPTPVGMEQVPPELLLPQDNTEEDCDPTASLRPFPTKAEADAAVAEIRAR
Mb0419c|M.bovis_AF2122/97           LPTPVGMEIMPPQPPLPPDSSSQDCDPTASLRPFATKAEADAAVADIRAR
Rv0411c|M.tuberculosis_H37Rv        LPTPVGMEIMPPQPPLPPDSSSQDCDPTASLRPFATKAEADAAVADIRAR
MMAR_0714|M.marinum_M               LPTPVGMEVMPPEPPLPADSSSQDCDPTASLRPFPTKAEADAAVADIRAR
MUL_2809|M.ulcerans_Agy99           LPTPVGMEVMPPEPPLPADSSSQDCDPTASLRPFPTKAEADAAVADIRAR
Mflv_0201|M.gilvum_PYR-GCK          PPTPAGLEELPPVPARPATPADTDCDPRASLRPFATQEEADAAVANIKAR
Mvan_0704|M.vanbaalenii_PYR-1       PPTPAGLEEMPPEPARAPTAADDDCDPLASLRPFDNKEDADKAVANIKAR
MSMEG_0787|M.smegmatis_MC2_155      PPTPAGMEEIPPQPVRLPEIDNDDCNRTASLRPFSNKEEAEAAVANIRAR
TH_2308|M.thermoresistible__bu      PPSPSGMEEMPPQPAQMPDPKAEDCDRTASLRPFPTRAEADEAVAHIRER
MAB_4223|M.abscessus_ATCC_1997      RPTPAEMTEQEPNRAVL-DKIDTSCDPTASLRPTSDRAANDEAVAAIRKR
                                     *:*  :    *           .*:  *****   :   : *** *: *

MAV_4750|M.avium_104                GRLIVGLDIGSNLFSFRDPITGEITGFDVDIAGEIARDIFGAPSHVEYRI
MLBr_00303|M.leprae_Br4923          GRLIVGLEIGSNLFSFRDPITGEITGFDIDIAGEVARDIFGTPSHMEYRI
Mb0419c|M.bovis_AF2122/97           GRLIVGLDIGSNLFSFRDPITGEITGFDVDIAGEVARDIFGVPSHVEYRI
Rv0411c|M.tuberculosis_H37Rv        GRLIVGLDIGSNLFSFRDPITGEITGFDVDIAGEVARDIFGVPSHVEYRI
MMAR_0714|M.marinum_M               GRLIVGLDIGSNLFSFRDPITGEITGFDVDIASEVARDIFGGPTHVEYRI
MUL_2809|M.ulcerans_Agy99           GRLIVGLDIGSNLFSFRDPITGEITGFDVDIASEVARDIFGGPTHVEYRI
Mflv_0201|M.gilvum_PYR-GCK          GRLIVGLDIGSNLFSFRDPITGEITGFDVDIAGEIARDIFGTPSQVEYRI
Mvan_0704|M.vanbaalenii_PYR-1       GRLIVGLDIGSNLFSFRDPITGEITGFDVDIAGEIARDIFGTPSQVEYRI
MSMEG_0787|M.smegmatis_MC2_155      GRLIVGLDIGSNLFSFRDPITGQITGFDVDIAGEVSRDIFGTPSKVEYRI
TH_2308|M.thermoresistible__bu      GRLIVGLDIGSNLFSFRDPITGQIAGFDVDIAGEIARDIFGSPAQVEYRI
MAB_4223|M.abscessus_ATCC_1997      GRLVVGLDIGSNLFSFRDPITGELTGFDVDIAGEVSRDIFGTPERVEYRI
                                    ***:***:**************:::***:***.*::***** * ::****

MAV_4750|M.avium_104                LSSDERVTALQRGEVDVVVKTMTITCDRRKQVNFSTVYLDANQRILAPRD
MLBr_00303|M.leprae_Br4923          LSTAARITALQKSEVDIIVKTMTITCKRRKLVNFSTVYLDAKQRILAPRD
Mb0419c|M.bovis_AF2122/97           LSAAERVTALQKSQVDIVVKTMSITCERRKLVNFSTVYLDANQRILAPRD
Rv0411c|M.tuberculosis_H37Rv        LSAAERVTALQKSQVDIVVKTMSITCERRKLVNFSTVYLDANQRILAPRD
MMAR_0714|M.marinum_M               LSAAERITALQSSQVDVVVKTMTITCERRKLVNFSTVYLDANQRILTSRD
MUL_2809|M.ulcerans_Agy99           LSAAERITALQSSQVDVVVKTMTITCERRKLVNFSTVYLDANQRILTSRD
Mflv_0201|M.gilvum_PYR-GCK          LSSADRVDALRDNQVDVVVKTMTITCERKKLVNFSTAYLIANQRILAPRD
Mvan_0704|M.vanbaalenii_PYR-1       LSSADRVEALQKNQVDVVVKTMTITCERKKLVNFSTAYLSANQRILAPRD
MSMEG_0787|M.smegmatis_MC2_155      LSSADRITALRNNQVDIVVKTMTITCERKKLVNFSTVYLMANQRILASRD
TH_2308|M.thermoresistible__bu      LSSADRIEALQNNEVDVVVKTMTITCERKEKIHFSTAYLNANQRILAPRS
MAB_4223|M.abscessus_ATCC_1997      LSSADRVAALKNSTVDIVVKTMTITCARRKEVNFSSVYLMNYQRILTSRD
                                    **:  *: **: . **::****:*** *:: ::**:.**   ****:.*.

MAV_4750|M.avium_104                SPITKVSDLSGKRVCVAKGTTSLHRIRQIDPPPIVVSVVNWADCLVAMQQ
MLBr_00303|M.leprae_Br4923          SPITKPSDLSNKRVCMTRGTTSLHQVSEVVPPPIIVSAENWADCLVAMQQ
Mb0419c|M.bovis_AF2122/97           SPITKVSDLSGKRVCVARGTTSLRRIREIAPPPVIVSVVNWADCLVALQQ
Rv0411c|M.tuberculosis_H37Rv        SPITKVSDLSGKRVCVARGTTSLRRIREIAPPPVIVSVVNWADCLVALQQ
MMAR_0714|M.marinum_M               SPIFKVSDLSGKRVCVARGTTSLRRIREIAPPPVIVSVVNWADCLVALQQ
MUL_2809|M.ulcerans_Agy99           SPIFKVSDLSGKRVCVARGTTSLRRIREIAPPPVIVSVVNWADCLVALQQ
Mflv_0201|M.gilvum_PYR-GCK          SNIRQSSDLSGKRVCVAKGTTSLERIQQISPPPLIVGVVTWADCLVALQQ
Mvan_0704|M.vanbaalenii_PYR-1       SNIRQSSDLSGKRVCVAKGTTSLERIQQITPPPIIVGVVTWADCLVALQQ
MSMEG_0787|M.smegmatis_MC2_155      SNISQASDLSGRRVCVVDGTTSLQRIQQISPSPIIVSVVTWADCLVALQQ
TH_2308|M.thermoresistible__bu      SPITRAADLSGRRVCVVKGTTSLTRVQQISPPPIIVAVETWADCLVAIQQ
MAB_4223|M.abscessus_ATCC_1997      SGITNAQDLSGRRVCAARGTTSLNRLSQITPPPVIMSVVTWADCLVALQQ
                                    * * .  ***.:*** . ***** :: :: *.*:::.. .*******:**

MAV_4750|M.avium_104                REIDAVSTDDSILAGLVEEDPYLHIVGPNMATQPYGIGINLNNTGLVRFV
MLBr_00303|M.leprae_Br4923          REIDAISTDDAILAGLVEEDPYLHIVGPNMATQPYGIGINLNNTTLVRFV
Mb0419c|M.bovis_AF2122/97           REIDAVSTDDTILAGLVEEDPYLHIVGPDMADQPYGVGINLDNTGLVRFV
Rv0411c|M.tuberculosis_H37Rv        REIDAVSTDDTILAGLVEEDPYLHIVGPDMADQPYGVGINLDNTGLVRFV
MMAR_0714|M.marinum_M               REIDAVSTDDTILAGLVEEDPYLHIVGPNMANQPYGIGINLDNTGLVRFV
MUL_2809|M.ulcerans_Agy99           REIDAVSTDDTILAGLVEEDPYLHIVGPNMANQPYGIGINLDNTGLVRFV
Mflv_0201|M.gilvum_PYR-GCK          RQVDAVSTDDAILAGLVSQDPYLHIVGPSMNEEPYGIGVNLQNTGLVRYV
Mvan_0704|M.vanbaalenii_PYR-1       RQVDAVSTDDSILAGLVSQDPYLHIVGPSMNEEPYGIGVNLENTGLVRFV
MSMEG_0787|M.smegmatis_MC2_155      RQADAVSTDDSILAGLVAQDPYLHIVGPSLSQEPYGIGVNLENTGLVRVV
TH_2308|M.thermoresistible__bu      NQVDAVSTDDSILAGLMAQDPYLHIVGPSMSQEPYGIGINKNNPGLVRFV
MAB_4223|M.abscessus_ATCC_1997      RQVDAVSTDDSILAGLMSQDPYLHIIGPNMSDEPYGIGIKLENTDLVRYV
                                    .: **:****:*****: :******:**.:  :***:*:: :*. *** *

MAV_4750|M.avium_104                NGTLERIRRDGTWNTLYRKWLTVLGPAPAPPTPRYLD
MLBr_00303|M.leprae_Br4923          NGTLERIRRDGTWITLYRKWLTVLGPAPAPPTPRYVD
Mb0419c|M.bovis_AF2122/97           NGTLERIRNDGTWNTLYRKWLTVLGPAPAPPTPRYVD
Rv0411c|M.tuberculosis_H37Rv        NGTLERIRNDGTWNTLYRKWLTVLGPAPAPPTPRYVD
MMAR_0714|M.marinum_M               NGTLERIRNDGTWNTLYRKWLSVLGPAPAPPRPRYVD
MUL_2809|M.ulcerans_Agy99           NGTLERIRNDGTWNTLYRKWLSVLGPAPAPPRPRYVD
Mflv_0201|M.gilvum_PYR-GCK          NGTLQRIRRDGTWNTLYRKWLTVLGPAPAPPVARYTD
Mvan_0704|M.vanbaalenii_PYR-1       NGTLQRIRRDGTWNTLYRKWLTVLGPAPAPPAARYSD
MSMEG_0787|M.smegmatis_MC2_155      NGTLERIRRDGTWYTLYRKWLTVLGPAPAPPVARYVD
TH_2308|M.thermoresistible__bu      NGTLERIRRDGTWNTLYRKWLTVLGPAPAPPVARYVD
MAB_4223|M.abscessus_ATCC_1997      NRTLERIRRDGTWNALYRKWLSVLGPAPAPPSAKYRD
                                    * **:***.**** :******:********* .:* *