For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VAAVTPVFVDVDTGVDDALALMYLFASPDADVVGIASTGGNVAVEQVCENNLGLLQLCGLTGIPVSKGSG QTLTGPMRLPSKVHGPRGLGYAELPPSDHRVTDHDSASAWVRAAHAHPGELIGVATGPLTNLALALRAEP ALPTLLRRLVIMGGSYDHRGNTTAVAEWNISVDPEAAAEVLAGWGGADVVRERLPILCGLDLTRKVAMTP DHLTRLATAADSGTRPLSADDEPGTRSAAANPLIRVIEDAMRFYLEAYHDLGHGYQAHMHDPLAAAVALD PTLVATRPATVEIELTGTLTRAMTVTDWSGRREPNALIGIDVDSAAFFDRFIERVGPFARRVGGGR
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. avium 104 | MAV_4342 | - | - | 100% (346) | inosine-uridine preferring nucleoside hydrolase |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3425 | iunH | 1e-113 | 60.65% (338) | nucleoside hydrolase IunH |
M. gilvum PYR-GCK | Mflv_4897 | - | 1e-127 | 67.26% (336) | inosine/uridine-preferring nucleoside hydrolase |
M. tuberculosis H37Rv | Rv3393 | iunH | 1e-113 | 60.65% (338) | nucleoside hydrolase IunH |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_3711 | - | 1e-122 | 62.90% (345) | putative nucleoside hydrolase IunH |
M. marinum M | MMAR_1152 | iunH | 1e-107 | 58.58% (338) | inosine-uridine nucleoside hydrolase, IunH |
M. smegmatis MC2 155 | MSMEG_1621 | - | 1e-130 | 66.96% (345) | pyrimidine-specific ribonucleoside hydrolase RihA |
M. thermoresistible (build 8) | TH_0487 | - | 1e-127 | 66.86% (341) | pyrimidine-specific ribonucleoside hydrolase RihA |
M. ulcerans Agy99 | - | - | - | - | - |
M. vanbaalenii PYR-1 | Mvan_1526 | - | 1e-132 | 68.80% (343) | inosine/uridine-preferring nucleoside hydrolase |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_4897|M.gilvum_PYR-GCK -----MSGD-SHPVFLDVDTGVDDAMALVYLLASPEADVVGIASTAGNVG Mvan_1526|M.vanbaalenii_PYR-1 -----MSGG-RHPVFVDVDTGVDDAMALVYLFGSPDADLVGIASTAGNVG TH_0487|M.thermoresistible__bu VGGVTTPGDERIPVFADVDTGVDDALALMYLLGCPEVRLVGIASTAGNVP MSMEG_1621|M.smegmatis_MC2_155 -----------MPVFADVDTGVDDAMALAYLLASSDADLVGIASTAGNIG MAB_3711|M.abscessus_ATCC_1997 ----------MVPVFADVDTGVDDALGLIYLLASEDAEIVGIASTAGNVS MAV_4342|M.avium_104 -------MAAVTPVFVDVDTGVDDALALMYLFASPDADVVGIASTGGNVA Mb3425|M.bovis_AF2122/97 ----------MSVVFADVDTGIDDALAVIYLLASPDADLVGIASTGGNIA Rv3393|M.tuberculosis_H37Rv ----------MSVVFADVDTGIDDALAVIYLLASPDADLVGIASTGGNIA MMAR_1152|M.marinum_M ----------MNPVFVDADTGIDDALALIYLLASTDADLVGIASTGGNTS ** *.***:***:.: **:.. :. :******.** Mflv_4897|M.gilvum_PYR-GCK VDDVCRNNLALLELCGTTGIPVSRGSATPLVAPLRTAEDTHGPRGLGYAR Mvan_1526|M.vanbaalenii_PYR-1 VDDVCRNNLALLELCGVTGVPVSRGSETPLVAPLRTAEDTHGPQGLGYAR TH_0487|M.thermoresistible__bu VHQVCRNNLDLLHMCGVTDVPVSKGAERPLRAQLRTAEDTHGPQGLGYAT MSMEG_1621|M.smegmatis_MC2_155 VHQVCINNLGLLELCGAPDIPVSRGAEQPLAAPLRTAEDTHGPEGLGYAR MAB_3711|M.abscessus_ATCC_1997 VDHVCANNLGLLELCKAPQIPVSKGVAEPLSAALRTAEDTHGPTGLGYAL MAV_4342|M.avium_104 VEQVCENNLGLLQLCGLTGIPVSKGSGQTLTGPMRLPSKVHGPRGLGYAE Mb3425|M.bovis_AF2122/97 VGQVCANNLSLLELCGAADIPVSKGADEPLGGRWPDHPKFHGPKGIGYAE Rv3393|M.tuberculosis_H37Rv VGQVCANNLSLLELCGAADIPVSKGADEPLGGRWPDHPKFHGPKGIGYAE MMAR_1152|M.marinum_M VDQVCTNNLGVLELCRAGDIPVARGADQPLTGQWPHRANTHGPKGLGYAE * .** *** :*.:* :**::* .* . . *** *:*** Mflv_4897|M.gilvum_PYR-GCK LPEPTTTLTDHDAAQAWVRAARDHPGELIGIATGPLTNLALALRAESALP Mvan_1526|M.vanbaalenii_PYR-1 LPAPTAALTDHDAAEAWVRAARAHPGELIGIATGPLTNLALALRAEPALP TH_0487|M.thermoresistible__bu LPPGAGELTDHDAAEAWVRAARAHPGELIAIATGPLTNLALALRAEPELP MSMEG_1621|M.smegmatis_MC2_155 LPATDRTLTTHDAAEAWIRAAHAHPGELIGLATGPLTNLALAMRAEPALP MAB_3711|M.abscessus_ATCC_1997 LPESTRTLTDYDSAEAWVKAAHAYPGELVGLATGPLTNLALALRTEPELP MAV_4342|M.avium_104 LPPSDHRVTDHDSASAWVRAAHAHPGELIGVATGPLTNLALALRAEPALP Mb3425|M.bovis_AF2122/97 LPASNRRLTDYDATTAWIAAAHSHAGDLIGLVTGPLTNLALALRAEPALP Rv3393|M.tuberculosis_H37Rv LPASNRRLTDYDATTAWIAAAHSHAGDLIGLVTGPLTNLALALRAEPALP MMAR_1152|M.marinum_M LPPTNRELATYDAAAAWVRMAHAYRGKLTGLVTGPLTNLARALRAEPALP ** :: :*:: **: *: : *.* .:.******** *:*:*. ** Mflv_4897|M.gilvum_PYR-GCK RLLKRLVIMGGAFDYRGNTTPVAEWNVSVDPESAAETFSAWS-------- Mvan_1526|M.vanbaalenii_PYR-1 RLLGRLVIMGGAFDYRGNTTPVAEWNVSVDPESAAEVFAAWH-------- TH_0487|M.thermoresistible__bu RLVKRLVIMGGAFDYRGNTTPVAEWNVSVDPEAWWEVLAFWRGAWG---- MSMEG_1621|M.smegmatis_MC2_155 RLMRRLVIMGGAFDYKGNTTPVAEWNISVDPESAAEVFGGWDAAWGGRGD MAB_3711|M.abscessus_ATCC_1997 KLLKRLVIMGGSFDYPGNTTPVAEWNVVVDPGATAEVYAAWG-------- MAV_4342|M.avium_104 TLLRRLVIMGGSYDHRGNTTAVAEWNISVDPEAAAEVLAGWGG------A Mb3425|M.bovis_AF2122/97 RLLRRLVIMGGMFDGQ----PITEWNIRVDPEAASEVFTAWA-------- Rv3393|M.tuberculosis_H37Rv RLLRRLVIMGGMFDGQ----PITEWNIRVDPEAASEVFTAWA-------- MMAR_1152|M.marinum_M AMLSRLVIMGGMFDADGND-VGADWNIRVDPEAASEVFAAWT-------- :: ******* :* ::**: *** : *. * Mflv_4897|M.gilvum_PYR-GCK RSGAGHLPIVLGLNLTEHAEMTPELLRRLAEAAGSTSTQMSVSDVRGTAS Mvan_1526|M.vanbaalenii_PYR-1 RSGADHLPIVLGLNLTENVAMTPQLLSRLADAAGSTSTPMSALDPRGTES TH_0487|M.thermoresistible__bu GSEPDHLPMVLGLNLTEHIEMTPTILSRLAAAAGCESTPLCESDERGTRS MSMEG_1621|M.smegmatis_MC2_155 DAAPAHVPIVLGLNLTENVAMTPALLNRLATAAGSPSTAMSVRDERGTRS MAB_3711|M.abscessus_ATCC_1997 AAGVQELPIVCGLNLTETIAMTPEHLVRLADAAGATTTPLSVLDSPSSRS MAV_4342|M.avium_104 DVVRERLPILCGLDLTRKVAMTPDHLTRLATAADSGTRPLSADDEPGTRS Mb3425|M.bovis_AF2122/97 --GQRQLPIVCGLDLTRRVAMTPDILARLASVCG---------------- Rv3393|M.tuberculosis_H37Rv --GQRQLPIVCGLDLTRRVAMTPDILARLASVCG---------------- MMAR_1152|M.marinum_M --GQQRLPIVCSLNLTRKVAMTPDILARLTCAAG---------------- .:*:: .*:**. *** * **: ... Mflv_4897|M.gilvum_PYR-GCK TASNPLIRVLEDAMRFYFEFHHDQGEGYLAHVHDPLAAAVALDTTLVRYR Mvan_1526|M.vanbaalenii_PYR-1 AASNPVIRVLEDAMRFYFEFHFDQGEGYLAHLHDPVAAAVALDTALVQCR TH_0487|M.thermoresistible__bu TAANPLIRVIEDAMRFYCEFHFDQGEGYLAHLHDPLAAAVALDPELVRFR MSMEG_1621|M.smegmatis_MC2_155 TAANPLIRVLEDAMRFYFEFHFDTGDGYLAHLHDPLAAAVALDPELVRCR MAB_3711|M.abscessus_ATCC_1997 GASNSLLRFIEDAAHFYFEFHMKQGEGFLAHMHDPFAAAVALDPSLVQTR MAV_4342|M.avium_104 AAANPLIRVIEDAMRFYLEAYHDLGHGYQAHMHDPLAAAVALDPTLVATR Mb3425|M.bovis_AF2122/97 --SSPVMRVIEDALRFYFESHEARGHGYLAYMHDPLAAAVAMDPELLTTR Rv3393|M.tuberculosis_H37Rv --SSPVMRVIEDALRFYFESHEARGHGYLAYMHDPLAAAVAMDPELLTTR MMAR_1152|M.marinum_M --PSALTRVIQDAVRFYFESHRDRGFGYLAYLHDPLAAAIALDPQLVTTQ ...: *.::** :** * : * *: *::***.***:*:*. *: : Mflv_4897|M.gilvum_PYR-GCK SAPVDVELTGTLTRGMTIADWSGHWGREPNALIGVEVDPAVFFDRFIARV Mvan_1526|M.vanbaalenii_PYR-1 PAPVDVELTGTLTRGMTIADWSHRWGREPNALIGVDVDPDAFFDRFIARV TH_0487|M.thermoresistible__bu AAAVDVELTGTLTRGMTIADWSGRWGREPNALIGVEVDPATFFDRFIERV MSMEG_1621|M.smegmatis_MC2_155 QTTVDVELTGTLTRGMTVADWRGHWGRRPNALIGMEVDPTVFFDRFISRV MAB_3711|M.abscessus_ATCC_1997 SATVDVELTGDLTRAMTIADWKGQWGQRPNAQIAVETDPEVFFQRFIERV MAV_4342|M.avium_104 PATVEIELTGTLTRAMTVTDWSGR--REPNALIGIDVDSAAFFDRFIERV Mb3425|M.bovis_AF2122/97 TATVDVD----PT-GATVTDWSGK--RNPNARIGMSVDPAVFFDRFVERI Rv3393|M.tuberculosis_H37Rv TATVDVD----PT-GATVTDWSGK--RNPNARIGMSVDPAVFFDRFVERI MMAR_1152|M.marinum_M VATVDVVLADIPTRGMTVADRSGK--HPPNARIGVSVDPAVFFERFIQRV :.*:: * . *::* : : *** *.:..*. .**:**: *: Mflv_4897|M.gilvum_PYR-GCK GAFAAALDHS--- Mvan_1526|M.vanbaalenii_PYR-1 GAFAQQLAGVSRR TH_0487|M.thermoresistible__bu GPLAKRLA----- MSMEG_1621|M.smegmatis_MC2_155 GAFAQRLTSHS-- MAB_3711|M.abscessus_ATCC_1997 SVFARTVDDAR-- MAV_4342|M.avium_104 GPFARRVGGGR-- Mb3425|M.bovis_AF2122/97 GRFARRT------ Rv3393|M.tuberculosis_H37Rv GRFARRT------ MMAR_1152|M.marinum_M AAFARRA------ . :*