For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. avium 104 MAV_3783 (rnc)

annotation: ribonuclease III
coordinates: 3909830 - 3910543
length: 237

SSRQPLLDALGVELPDELLSLALTHRSYAYEHGGLPTNERLEFLGDAVLGLTITDALYHRHPDRTEGDLA
KLRASVVNTQALADVARKLCDGGLGAHLLLGRGEANTGGADKSSILADGMESLLGAIYLQHGIDTAREVI
LRLFGALLDAAPTLGAGLDWKTSLQELTAARGMGAPSYLVTSTGPDHDKEFTAVVVVADTEYGTGVGRSK
KEAEQKAAAATWKALDVLDPAAQTSA*
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. avium 104MAV_3783rnc-100% (237)ribonuclease III

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb2950crnc1e-11889.12% (239) ribonuclease III
M. gilvum PYR-GCKMflv_4192rnc1e-9876.52% (230) ribonuclease III
M. tuberculosis H37RvRv2925crnc1e-11889.12% (239) ribonuclease III
M. leprae Br4923MLBr_01659rnc1e-11386.70% (233) ribonuclease III
M. abscessus ATCC 19977MAB_3256crnc9e-9877.93% (222) ribonuclease III
M. marinum MMMAR_1782rnc1e-10784.21% (228) ribonuclease III Rnc
M. smegmatis MC2 155MSMEG_2418rnc1e-10079.11% (225) ribonuclease III
M. thermoresistible (build 8)TH_1224rnc1e-10580.53% (226) PROBABLE RIBONUCLEASE III RNC (RNASE III)
M. ulcerans Agy99MUL_2030rnc1e-10884.65% (228) ribonuclease III
M. vanbaalenii PYR-1Mvan_2171rnc2e-9878.48% (223) ribonuclease III

CLUSTAL 2.0.9 multiple sequence alignment


Mflv_4192|M.gilvum_PYR-GCK          ----MTVDRALLLKALGIDLPAELLTIALTHRSYSYENGGVPTNERLEFL
Mvan_2171|M.vanbaalenii_PYR-1       ----MTVDRALLLEALGVDLPGELLTIALTHRSYSYENGGVPTNERLEFL
MSMEG_2418|M.smegmatis_MC2_155      ----MTDSHAALLEALGVALPAELLTIALTHRSYSYENGGLPTNERLEFL
TH_1224|M.thermoresistible__bu      ----VSADRSALLEALGVDLPDELLTIALTHRSYSYEHGGLPTNERLEFL
Mb2950c|M.bovis_AF2122/97           ----MIRSRQPLLDALGVDLPDELLSLALTHRSYAYENGGLPTNERLEFL
Rv2925c|M.tuberculosis_H37Rv        ----MIRSRQPLLDALGVDLPDELLSLALTHRSYAYENGGLPTNERLEFL
MMAR_1782|M.marinum_M               ------MSRQALLDAVGVELPEELVTLALTHRSYAYENGGLPTNERLEFL
MUL_2030|M.ulcerans_Agy99           ----MSVSRQALLDAVGVELPEELVTLALTHRSYAYENGGLPTNERLEFL
MAV_3783|M.avium_104                ----MS-SRQPLLDALGVELPDELLSLALTHRSYAYEHGGLPTNERLEFL
MLBr_01659|M.leprae_Br4923          ----MTQPRQALLDAFGVDLPDELLSLALTHRSYAYEHGGLPTNERLEFL
MAB_3256c|M.abscessus_ATCC_199      MSRTPEHRHDDLRAAIGVQLGDELLTLALTHRSYAYENGGLPTNERLEFL
                                            :  *  *.*: *  **:::*******:**:**:*********

Mflv_4192|M.gilvum_PYR-GCK          GDSVLGLTITEELYHRHPDRSEGDLAKLRASIVNTQALADVGRNLSEHGL
Mvan_2171|M.vanbaalenii_PYR-1       GDSVLGLTITEELYHRHPDRSEGDLAKLRASIVNTQALADVGRNLTEHGL
MSMEG_2418|M.smegmatis_MC2_155      GDAVLGLTITEELYHRHPDRAEGDLAKLRASIVNTQALADVGRGLTDEGL
TH_1224|M.thermoresistible__bu      GDAVLGLTITEELYHRHPDRSEGDLAKLRASIVNTQALADVGRRLSESGL
Mb2950c|M.bovis_AF2122/97           GDAVLGLTITDALFHRHPDRSEGDLAKLRASVVNTQALADVARRLCAEGL
Rv2925c|M.tuberculosis_H37Rv        GDAVLGLTITDALFHRHPDRSEGDLAKLRASVVNTQALADVARRLCAEGL
MMAR_1782|M.marinum_M               GDAVLGLTITDELFHRHPERSEGDLAKLRASVVNTQALADVARHLSEHGL
MUL_2030|M.ulcerans_Agy99           GDAVLGLTITDELFHRHPERSEGDLAKLRASVVNTQALADVARHLSDHGL
MAV_3783|M.avium_104                GDAVLGLTITDALYHRHPDRTEGDLAKLRASVVNTQALADVARKLCDGGL
MLBr_01659|M.leprae_Br4923          GDAVLSLTITDELFHRHPDRSEGDLAKLRASVVNTQALAYVARNLSDGGL
MAB_3256c|M.abscessus_ATCC_199      GDAVLGLTITETLYHSHPDRSEGDLAKLRASIVNTQALAGVARGLTGDGL
                                    **:**.****: *:* **:*:**********:******* *.* *   **

Mflv_4192|M.gilvum_PYR-GCK          GAYLLLGKGEENSGGADKSSILADGVESLLGAIYLEHGAVAAREVILRLF
Mvan_2171|M.vanbaalenii_PYR-1       GAYLLLGKGEENSGGADKSSILADGVESLLGAIYLECGGEVAREVILRLF
MSMEG_2418|M.smegmatis_MC2_155      GAHLFLGKGEENSGGADKSSILADGVESLLGAIYLEHGLTVVREVILRLF
TH_1224|M.thermoresistible__bu      GAYILLGKGEESSGGADKSSILADGVESLLGAIYIHHGLETSRAVILRLF
Mb2950c|M.bovis_AF2122/97           GVHVLLGRGEANTGGADKSSILADGMESLLGAIYLQHGMEKAREVILRLF
Rv2925c|M.tuberculosis_H37Rv        GVHVLLGRGEANTGGADKSSILADGMESLLGAIYLQHGMEKAREVILRLF
MMAR_1782|M.marinum_M               GAHMLLGRGEANTGGADKSSILADGMESLLGAIYLHHGMEVAREAILRIF
MUL_2030|M.ulcerans_Agy99           GAHMLLGRGEANTGGADKSSILADGMESLLGAIYLHHGMEVAREAILRIF
MAV_3783|M.avium_104                GAHLLLGRGEANTGGADKSSILADGMESLLGAIYLQHGIDTAREVILRLF
MLBr_01659|M.leprae_Br4923          GVYLLLGRGETNTGGADKSSILADGMESLLGAIYLHHGIEVARQVILRLF
MAB_3256c|M.abscessus_ATCC_199      GAHLLLGKGEENTGGRDKSSILADGMESILGAVYLEHGLETARAVVLTLF
                                    *.:::**:** .:** *********:**:***:*:. *    * .:* :*

Mflv_4192|M.gilvum_PYR-GCK          SDLLDTAPTLGAGLDWKSSLQELTASLALGAPSYHVTSTGPDHDKEFTAV
Mvan_2171|M.vanbaalenii_PYR-1       SSLLDTAPTLGAGLDWKSSLQELTASRGLGAPTYVVTSTGPDHDKEFTAA
MSMEG_2418|M.smegmatis_MC2_155      GELLDTAPTLGAGLDWKSSLQELTAARGLGAPAYVVTSTGPDHDKEFSAT
TH_1224|M.thermoresistible__bu      GELLDTAPTLGAGLDWKSSLQELTAARGMGAPSYVVTSTGPDHDKEFTAT
Mb2950c|M.bovis_AF2122/97           GPLLDAAPTLGAGLDWKTSLQELTAARGLGAPSYLVTSTGPDHDKEFTAV
Rv2925c|M.tuberculosis_H37Rv        GPLLDAAPTLGAGLDWKTSLQELTAARGLGAPSYLVTSTGPDHDKEFTAV
MMAR_1782|M.marinum_M               GPLLDAAPTLGAGLDWKTSLQELTASRSLGAPSYAVTSTGPDHHKEFTAV
MUL_2030|M.ulcerans_Agy99           GPLLDAAPTLGAGLDWKTSLQELTASRSLGAPSYAVTSTGPDHHKEFTAV
MAV_3783|M.avium_104                GALLDAAPTLGAGLDWKTSLQELTAARGMGAPSYLVTSTGPDHDKEFTAV
MLBr_01659|M.leprae_Br4923          GTLLDAAPTLGAGLDWKTSLQELTAARGMGVPSYVVTSTGPDHDKEFTAV
MAB_3256c|M.abscessus_ATCC_199      GELLETAPKLGAGLDWKTSLQELTAEKGWGAPSYAVTSTGPDHDKEFTAT
                                    . **::**.********:*******  . *.*:* ********.***:*.

Mflv_4192|M.gilvum_PYR-GCK          VIIAEREHGTGVGRTKKEAELKAASAAWNALQ------RAHPDA------
Mvan_2171|M.vanbaalenii_PYR-1       VMVGDSECGRGVGRTKKEAELKAAAAAWHALT------GDLTSAD-----
MSMEG_2418|M.smegmatis_MC2_155      VVIGEAEYGHGVGRTKKEAELKAAASAYKTLD------ES----------
TH_1224|M.thermoresistible__bu      VVIAEQEYGTGTGRTKKEAELKAAAAAWHALD------GA----------
Mb2950c|M.bovis_AF2122/97           VVVMDSEYGSGVGRSKKEAEQKAAAAAWKALE---VLDNAMPGKTSA---
Rv2925c|M.tuberculosis_H37Rv        VVVMDSEYGSGVGRSKKEAEQKAAAAAWKALE---VLDNAMPGKTSA---
MMAR_1782|M.marinum_M               VVVNNTEYGSGVGRSKKEAEQKAAAAAYQALEGLEVLDGAMPGNSSA---
MUL_2030|M.ulcerans_Agy99           VVVNNTEYGSGVGRSKKEAEQKAAAAAYQALEGLEVLDGAMPGNSSA---
MAV_3783|M.avium_104                VVVADTEYGTGVGRSKKEAEQKAAAATWKALD---VLDPAA--QTSA---
MLBr_01659|M.leprae_Br4923          VVVMDTEYGSGIGHSKKEAEQKAASAAWKALD---VLGGVG--KTSV---
MAB_3256c|M.abscessus_ATCC_199      VMVNDTAHGVGVGRSKKEAEQKAAAEAWNSISGDEPLGGRAEGGDEPLEG
                                    *:: :   * * *::***** ***: :::::                   

Mflv_4192|M.gilvum_PYR-GCK          --------
Mvan_2171|M.vanbaalenii_PYR-1       --------
MSMEG_2418|M.smegmatis_MC2_155      --------
TH_1224|M.thermoresistible__bu      --------
Mb2950c|M.bovis_AF2122/97           --------
Rv2925c|M.tuberculosis_H37Rv        --------
MMAR_1782|M.marinum_M               --------
MUL_2030|M.ulcerans_Agy99           --------
MAV_3783|M.avium_104                --------
MLBr_01659|M.leprae_Br4923          --------
MAB_3256c|M.abscessus_ATCC_199      RAEGTVSA