For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. avium 104 MAV_3610 (-)

annotation: thymidylate synthase
coordinates: 3739769 - 3740422
length: 217

MGIDVTVLRVFADSDGNFGNPLGVVDAGRVEVAGRQRLATQLGYSETVFVDLPAPGSSTAHATIYTPRTE
LPFAGHPTVGAAWWLREQGSPINTLAVPAGIVQVGYDGPCARISARSEWAPELALHEFGSAEEVLAADPT
EFSDDTARALRSRMFAANLGVPEDEATGSAAMRITDYLSRDLRITQGKGSVIETSWSAEGWVGVAGRVVN
DGVRHLD
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. avium 104MAV_3610--100% (217)thymidylate synthase

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb2735-7e-9069.74% (228) hypothetical protein Mb2735
M. gilvum PYR-GCKMflv_3953-9e-8060.96% (228) PhzF family phenazine biosynthesis protein
M. tuberculosis H37RvRv2716-7e-9069.74% (228) hypothetical protein Rv2716
M. leprae Br4923-----
M. abscessus ATCC 19977MAB_3035-1e-7159.21% (228) hypothetical protein MAB_3035
M. marinum MMMAR_1996-1e-9070.61% (228) hypothetical protein MMAR_1996
M. smegmatis MC2 155MSMEG_2744-1e-8567.98% (228) thymidylate synthase
M. thermoresistible (build 8)TH_0183-7e-8264.47% (228) CONSERVED HYPOTHETICAL PROTEIN
M. ulcerans Agy99MUL_3359-6e-9070.18% (228) hypothetical protein MUL_3359
M. vanbaalenii PYR-1Mvan_2444-9e-7859.83% (229) PhzF family phenazine biosynthesis protein

CLUSTAL 2.0.9 multiple sequence alignment


Mb2735|M.bovis_AF2122/97            MAIEVSVLRVFTDSDGNFGNPLGVINASKVEHRDRQQLAAQSGYSETIFV
Rv2716|M.tuberculosis_H37Rv         MAIEVSVLRVFTDSDGNFGNPLGVINASKVEHRDRQQLAAQSGYSETIFV
MMAR_1996|M.marinum_M               MGIDVTVLRVFTDPTGNFGNPLGVVDASKVEPRDRQHLASRLAYSETVFV
MUL_3359|M.ulcerans_Agy99           MGIDVTVLRVFTDPIGNFGNPLGVVDASKVEPRDRQHLASRLAYSETVFV
MAV_3610|M.avium_104                MGIDVTVLRVFADSDGNFGNPLGVVDAGRVEVAGRQRLATQLGYSETVFV
Mflv_3953|M.gilvum_PYR-GCK          MAIDVTVLRVFTDQDGRFGNPLGVVDASTVDPGDRQRIATELGYSETVFI
Mvan_2444|M.vanbaalenii_PYR-1       MAIDVTVLRVFTDRDGRFGNPLGVVDASTVQAADRQRIATELGFSETVFI
MSMEG_2744|M.smegmatis_MC2_155      MAIDVTVLRVFTDSDGKFGNPLGVVDNSTVDPADRQRIAKELGYSETIFI
TH_0183|M.thermoresistible__bu      MGLDVTVLRVFTDPDGKFGNPLGVVDDAAVDPADRQRIATELGYSETVFV
MAB_3035|M.abscessus_ATCC_1997      MSVDVAVVRVFTDETGNFGNPLGIVNGADVGAADRQQVAARLGFSETVFV
                                    *.::*:*:***:*  *.******::: . *   .**::* . .:***:*:

Mb2735|M.bovis_AF2122/97            DLPSPGSTTAHATIHTPRTEIPFAGHPTVGASWWLRERGTPINTLQVPAG
Rv2716|M.tuberculosis_H37Rv         DLPSPGSTTAHATIHTPRTEIPFAGHPTVGASWWLRERGTPINTLQVPAG
MMAR_1996|M.marinum_M               DLPATGSHTAHATIYTPRTDIAFAGHPTVGASWWLREQGTPVNTLQVPAG
MUL_3359|M.ulcerans_Agy99           DLPATGSHTAHATTYTPRTDIAFAGHPTVGASWWLREQGTPVNTLQVPAG
MAV_3610|M.avium_104                DLPAPGSSTAHATIYTPRTELPFAGHPTVGAAWWLREQGSPINTLAVPAG
Mflv_3953|M.gilvum_PYR-GCK          TLPPEGTHSAHAHIHTPTLELPFAGHPTVGAAWWLRDRGTPIKTLQVPAG
Mvan_2444|M.vanbaalenii_PYR-1       TLPREGTHSASAHIHTPTTQLPFAGHPTVGASWWLKDRGLPIKTLQVPAG
MSMEG_2744|M.smegmatis_MC2_155      DLPGPDSHTAHARIFTPASELPFAGHPTVGAAWYLRDIGRPIKTLQVPAG
TH_0183|M.thermoresistible__bu      EVPQSGTNTAQARIFTPVTEMRFAGHPTVGAAWWLREQGRPIHTLQVPAG
MAB_3035|M.abscessus_ATCC_1997      DLPAEGSNTAHLRIFTPAAELPFAGHPTVGLAWWLRERGTPVNTLQVPAG
                                     :*  .: :*    .**  :: ******** :*:*:: * *::** ****

Mb2735|M.bovis_AF2122/97            IVQVSYHGDLTAISARSEWAPEFAIHDLDSLDALAAADPADFPD-DIAHY
Rv2716|M.tuberculosis_H37Rv         IVQVSYHGDLTAISARSEWAPEFAIHDLDSLDALAAADPADFPD-DIAHY
MMAR_1996|M.marinum_M               LVQVHHDRDLTTISARAEWAPEFAIHDLDSPDALAAADPSDFAD-DTAHY
MUL_3359|M.ulcerans_Agy99           LVQVHHDRDLTTISARAEWAPEFAIHDLDSPDALAAADPSDFAD-DTAHY
MAV_3610|M.avium_104                IVQVGYDGPCARISARSEWAPELALHEFGSAEEVLAADPTEFSD-DTAR-
Mflv_3953|M.gilvum_PYR-GCK          IVQISYPGELAAVSARAEWAPTFSIYDVATLDELAAADPDDYAD-EAEHY
Mvan_2444|M.vanbaalenii_PYR-1       IVQVTYTGDLTAVSARADWAPDFSINHVASLDDLAAADPDDYADDEAEHY
MSMEG_2744|M.smegmatis_MC2_155      IVQVTYDGDLAAISARSEWAPEFAIYDLPSAEELMSADPDDYDD-DVQHY
TH_0183|M.thermoresistible__bu      IVQVSYRDDLTEVSARAEWAPEFVIRELETAEELLAADPDEYPD-DIGHY
MAB_3035|M.abscessus_ATCC_1997      VLQVSYD-DRTWIRARSDWAPETDFHESDSPADVEAADPADYPD-ELLHC
                                    ::*: :    : : **::***   : .  :   : :*** :: * :  : 

Mb2735|M.bovis_AF2122/97            LWTWTDRSAGSLRARMFAANLGVTEDEATGAAAIRITDYLSRDLTITQGK
Rv2716|M.tuberculosis_H37Rv         LWTWTDRSAGSLRARMFAANLGVTEDEATGAAAIRITDYLSRDLTITQGK
MMAR_1996|M.marinum_M               LWTWTDEAAGELRSRMFASNLGVEEDEATGSAAMRLTDYLSRDLTITQGK
MUL_3359|M.ulcerans_Agy99           LWTWTDDAAGDLRSRMFASNLGVEEDEATGSAAMRLTDYLSRDLTITQGK
MAV_3610|M.avium_104                ----------ALRSRMFAANLGVPEDEATGSAAMRITDYLSRDLRITQGK
Mflv_3953|M.gilvum_PYR-GCK          LWTWIDQAAGTIRARMFAPHMGIREDEATGAAAVRITEYLSRDLTIVQGK
Mvan_2444|M.vanbaalenii_PYR-1       LWTWLDEAADTIRSRMFAPHLGIREDEATGAAAVRITEHLSRDLTIVQGQ
MSMEG_2744|M.smegmatis_MC2_155      LWTWSDKNEGVLRSRMFATNLGIREDEATGAAAVRITDYLSRDLTIVQGK
TH_0183|M.thermoresistible__bu      LWTWTDREHGQIRARMFANNLGIPEDEATGSAAVRITEFLSRDLTIVQGK
MAB_3035|M.abscessus_ATCC_1997      IWAWQNRDANLVRSRVFASDLGVDEDEATGSVAARLTDLLSRDLIINQGK
                                               :*:*:** .:*: ******:.* *:*: ***** * **:

Mb2735|M.bovis_AF2122/97            GSLIHTTWSPEGWVRVAGRVVSDGVAQLD-
Rv2716|M.tuberculosis_H37Rv         GSLIHTTWSPEGWVRVAGRVVSDGVAQLD-
MMAR_1996|M.marinum_M               GSIINTTWSAEGWVAVAGRVVSDGVTHVD-
MUL_3359|M.ulcerans_Agy99           GSIINTTWSAEGWVAVAGRVVSDGVTHVD-
MAV_3610|M.avium_104                GSVIETSWSAEGWVGVAGRVVNDGVRHLD-
Mflv_3953|M.gilvum_PYR-GCK          GSVLQTTWSAYGWVEVAGRVVDDGQRQID-
Mvan_2444|M.vanbaalenii_PYR-1       GSVIETKWSPEGWVQIAGRVVDDGQRQID-
MSMEG_2744|M.smegmatis_MC2_155      GSVIRTRWSPEGWVQVAGRVVNDGTRQLEL
TH_0183|M.thermoresistible__bu      GSIIETRWNPEGWVQIAGRVARDEIRTLD-
MAB_3035|M.abscessus_ATCC_1997      GSQIFTQWSPEGWVTIGGRVVADQPLTLD-
                                    ** : * *.. *** :.***. *    ::