For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VTGSATSKIAETLRDLGCAIGAAARGVSRSRIAWTVAGITALVVLASLIPLPSPVQMRDWAQSVGPWFPL AFLLAHIVVTVVPVPRTAFTLAAGLLFGPLLGVAIAVAASTASAMIAMLLVRAAGWRLTRLVRHRSMDTV EERLRQRGWLAIVSLRLIPAVPFSALNYAAGASSVRVLPYGLATLAGLLPGTAAVVILGDALAGHPSSLL YLVSALTSALGLTGLIIEIRHFRRHHRRAHRHRDDEPSPEPATIG
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. avium 104 | MAV_3279 | - | - | 100% (255) | hypothetical protein MAV_3279 |
M. avium 104 | MAV_4545 | - | 2e-15 | 27.45% (204) | hypothetical protein MAV_4545 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1528c | - | 5e-86 | 64.17% (254) | hypothetical protein Mb1528c |
M. gilvum PYR-GCK | Mflv_3651 | - | 3e-73 | 60.62% (226) | hypothetical protein Mflv_3651 |
M. tuberculosis H37Rv | Rv1491c | - | 5e-86 | 64.17% (254) | hypothetical protein Rv1491c |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_2713 | - | 1e-72 | 54.96% (242) | hypothetical protein MAB_2713 |
M. marinum M | MMAR_2301 | - | 2e-89 | 66.67% (252) | hypothetical protein MMAR_2301 |
M. smegmatis MC2 155 | MSMEG_3157 | - | 3e-81 | 65.37% (231) | hypothetical protein MSMEG_3157 |
M. thermoresistible (build 8) | TH_0612 | - | 1e-59 | 60.99% (182) | CONSERVED MEMBRANE PROTEIN |
M. ulcerans Agy99 | MUL_1504 | - | 2e-89 | 66.67% (252) | hypothetical protein MUL_1504 |
M. vanbaalenii PYR-1 | Mvan_2761 | - | 7e-77 | 61.50% (226) | hypothetical protein Mvan_2761 |
CLUSTAL 2.0.9 multiple sequence alignment Mb1528c|M.bovis_AF2122/97 -------------------------MTAPAICNTTETVHGIATSLGAVAR Rv1491c|M.tuberculosis_H37Rv -------------------------MTAPAICNTTETVHGIATSLGAVAR MMAR_2301|M.marinum_M -------------------------MTASVLCKTTDTVRGIALALRTAAR MUL_1504|M.ulcerans_Agy99 -----------------------MIVTASVLCKTTDTVRGIALALRTAAR MAV_3279|M.avium_104 -------------------------MTGSATSKIAETLRDLGCAIGAAAR MAB_2713|M.abscessus_ATCC_1997 -----------------------------------MGFRQIGRTAVATLR Mflv_3651|M.gilvum_PYR-GCK ----------------------MRAVPLVTVKSVVSTVRDAASAVAATLA Mvan_2761|M.vanbaalenii_PYR-1 MMAVTPLSAGGRLNGVTIQPVRHGPVPLVIVKSVVSALRTVGAAVVATLK MSMEG_3157|M.smegmatis_MC2_155 ------------------------------MKAVVSTLRSIRAAVLTTAA TH_0612|M.thermoresistible__bu ------------------------------VNTVVNTLRAVRAAVVTTTA .: : :. Mb1528c|M.bovis_AF2122/97 QASLPRIVGTVVGITVLVVVALLVPVPTAVELRDWAKSLGAWFPLAFLLV Rv1491c|M.tuberculosis_H37Rv QASLPRIVGTVVGITVLVVVALLVPVPTAVELRDWAKSLGAWFPLAFLLV MMAR_2301|M.marinum_M QMSRLRKVSTVAGITLLVAVALLVPLPTAVQMRDWASSVGPWLPLVFLLV MUL_1504|M.ulcerans_Agy99 QMSRLRKVSTVAGITLLVAVALLVPLPTAVQMRDWASSVGPWLPLVFLLV MAV_3279|M.avium_104 GVSRSRIAWTVAGITALVVLASLIPLPSPVQMRDWAQSVGPWFPLAFLLA MAB_2713|M.abscessus_ATCC_1997 RLPRRQLLWTGAALLIVIAAVRFVPLPTALQMRDWARDLGPWFPLAFLGA Mflv_3651|M.gilvum_PYR-GCK TLPRTRLLAMAATIVILVAVAYFVPLPTALQVRDWATSAGPWFPLVFFVA Mvan_2761|M.vanbaalenii_PYR-1 TAPRGRLAATLTAIVILVAVALLVPLPTALQLRDWATSVGSWFPLAFFAA MSMEG_3157|M.smegmatis_MC2_155 TLSTRRIVAILAGIVILVAVALLVPLPTAMQLRDWATSVGPWFPLAFLGA TH_0612|M.thermoresistible__bu QVPRHRLAMLAGGIVMLAAVVLLVPVPTAVQLRDWATSAGPWFPLAFLAA . : : : . . ::*:*:.:::**** . *.*:**.*: . Mb1528c|M.bovis_AF2122/97 HTVVTVPPFPRTAFTLAAGLLFGSVVGVFIAVVGSTASAVIAMLLVRATG Rv1491c|M.tuberculosis_H37Rv HTVVTVPPFPRTAFTLAAGLLFGSVVGVFIAVVGSTASAVIAMLLVRATG MMAR_2301|M.marinum_M HIVVTVPPFPRTAFTVAGGLLFGPVLGIVIAVTASTASAVIALLLVRAAG MUL_1504|M.ulcerans_Agy99 HIVVTVPPFPRTAFTVAGGLLFGPVLGIVIAVTASTASAVIALLLVRAAG MAV_3279|M.avium_104 HIVVTVVPVPRTAFTLAAGLLFGPLLGVAIAVAASTASAMIAMLLVRAAG MAB_2713|M.abscessus_ATCC_1997 HTIVTVLPFPRTAFTLAAGLLFGTQLGVLLAVVASTASAVLALWAVRALG Mflv_3651|M.gilvum_PYR-GCK HVVVTVFPFPRTAFTLAAGLLFGPALGVPIAVAASTLSAVIALLLVRTAG Mvan_2761|M.vanbaalenii_PYR-1 HVVVTVFPFPRTAFTLAAGLLFGPVLGIPIAVAASTVSAVVALLLVRVAG MSMEG_3157|M.smegmatis_MC2_155 HILVTVFPFPRTAFTLAAGLLFGPALGIAIAVSASAISAVLALLLIRAAG TH_0612|M.thermoresistible__bu HVVVTVLPFPRTAFTLAAGLLFGPLLGVLLAVLASTISAVVTLIGVRALG * :*** *.******:*.*****. :*: :** .*: **:::: :*. * Mb1528c|M.bovis_AF2122/97 WQLNSLVRRRAINRLDERLRERGWLAILSLRLIPVVPFAAINYAAGASGV Rv1491c|M.tuberculosis_H37Rv WQLNSLVRRRAINRLDERLRERGWLAILSLRLIPVVPFAAINYAAGASGV MMAR_2301|M.marinum_M WRLNRLVPHGAVDRLDERLRERGWLAILSLRLIPAVPFAALNYGAGASAV MUL_1504|M.ulcerans_Agy99 WRLNRLVPHGAVDRLDERLRERGWLAILSLRLIPAVPFAALNYGAGASAV MAV_3279|M.avium_104 WRLTRLVRHRSMDTVEERLRQRGWLAIVSLRLIPAVPFSALNYAAGASSV MAB_2713|M.abscessus_ATCC_1997 WKLSALHHRPAVKSVDDQLRRRGWIAVMSMRLIPAVPFSVLNYAAGASAV Mflv_3651|M.gilvum_PYR-GCK WQVHKLVEHPRVDAIDQRLRERGWPVVLSARLIFALPFSVLNYAAGASSV Mvan_2761|M.vanbaalenii_PYR-1 WQVSRLVVHPRVDAVDKRLRERGWPVVLATRMIPAVPFSVLNYAAGASSV MSMEG_3157|M.smegmatis_MC2_155 WQLSRLVSHPRIDKLDARLRQRGWPVILSTRLIPAVPFSVLNYAAGASAV TH_0612|M.thermoresistible__bu LRWTRLIAHPRIAAIDDRLRQRGWPAVISMRLIPAVPFSILNYAAGASAV : * : : :: :**.*** .::: *:* .:**: :**.****.* Mb1528c|M.bovis_AF2122/97 RILSFAWATLAGLLPGTAAVVILGDAFAGSGSPLLILVSVCTGALGLTGL Rv1491c|M.tuberculosis_H37Rv RILSFAWATLAGLLPGTAAVVILGDAFAGSGSPLLILVSVCTGALGLTGL MMAR_2301|M.marinum_M RVVPYTLSTLAGLLPGTVAVVILGSALAGDGSPLLVLVSVCTAALGMSGL MUL_1504|M.ulcerans_Agy99 RVVPYTLSTLAGLLPGTVAVVILGSALAGDGSPLLVLVSVCTAALGMSGL MAV_3279|M.avium_104 RVLPYGLATLAGLLPGTAAVVILGDALAGHPSSLLYLVSALTSALGLTGL MAB_2713|M.abscessus_ATCC_1997 RALPYTLATFVGLLPGTLAVVVLGDALTGHISPTLFAVSLATSAIGVLGI Mflv_3651|M.gilvum_PYR-GCK RVLPYTLATLFGVLPGTAAVVILGDALTGRVSPMLLVVSLCTALVGLAVL Mvan_2761|M.vanbaalenii_PYR-1 RLMPYTLATVVGVLPGTSAIVILGDALTGRVSPLLVLVSLCTAAVGVAGL MSMEG_3157|M.smegmatis_MC2_155 RLVPYALATLVGLLPGTAAVVILGDALTGNVSPLLFVVSACTAALGLAGL TH_0612|M.thermoresistible__bu RVGPYTLATLVGLLPXXXSGRRTTAGSPDGRHPAVPLSGPSYGPLSGPGR * .: :*. *:** : . .. . : . . :. Mb1528c|M.bovis_AF2122/97 VYEIRNYRRQHR-RMPGYDD-PVREPALI---- Rv1491c|M.tuberculosis_H37Rv VYEIRNYRRQHR-RMPGYDD-PVREPALI---- MMAR_2301|M.marinum_M VFEVRQYRRHHRHQAPSDHG-PVLEPACEPLGV MUL_1504|M.ulcerans_Agy99 VFEVRQYRRHHRHQAPSDHG-PVLEPACEPLGV MAV_3279|M.avium_104 IIEIRHFRRHHRRAHRHRDDEPSPEPATIG--- MAB_2713|M.abscessus_ATCC_1997 LYEIRRYKRTHT-EIPDPESSGAPERVGR---- Mflv_3651|M.gilvum_PYR-GCK ALEIRSHRR-----AGAADARP----------- Mvan_2761|M.vanbaalenii_PYR-1 IYEIRTHRR-----SQTPVTTV----------- MSMEG_3157|M.smegmatis_MC2_155 VFEIRSHRREQRAAAGAADTAASNL-------- TH_0612|M.thermoresistible__bu SRGPRARRPRPRR-------------------- * :