For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VNIAEHALAAAQSPALITDGGTISYGELHDRSRRVAAALHELGLRRGDGVAVVLPNRPEFLEITWGCQLS GLYYTPVNTHFTADEVVYVIDDSDAKAVFVDASLPGIAARLRSANPAVHIGVGGKLPGWRDYEGVLGVAG DAPPVSDGSEMLYSSGTTGRPKAVRRPLPQDGNGSWAQSVLELALIHKYGMTQRSVYLSPAPLYHAAGVN YTMAVNRVGAASIIMRKFDAETVLRLIETHRVTHAQFVPTMFVRMLKLPEAVRDRYDVSSLRCVIHAAAP CPVDVKHRMMRWFGPIIHEYYGGTEGFAGTTIGPQEWLAHPGSVGIPLAPVHVLDEDGREVPVGQTGELY FEGGPDFEYFKDPVKTASVYNERGWRSLGDMGHLDEDGYLYLTDRSTFTIVSGGVNIYPQEVENLLVMHP KLLDAAVFGVPNDEFGEEVKAVVQPADGVPPGPDLAAELIAYCRAHLAGYKCPRTVEFDTLPRDPNGKLY KRRIRERYWQGRESRIV
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. avium 104 | MAV_2951 | - | - | 100% (507) | acyl-CoA synthase |
M. avium 104 | MAV_4961 | - | e-132 | 47.43% (506) | acyl-CoA synthetase |
M. avium 104 | MAV_2547 | - | e-130 | 47.63% (506) | acyl-CoA synthetase |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0220 | fadD4 | 1e-133 | 49.30% (499) | acyl-CoA synthetase |
M. gilvum PYR-GCK | Mflv_0449 | - | 1e-131 | 46.72% (518) | acyl-CoA synthetase |
M. tuberculosis H37Rv | Rv0214 | fadD4 | 1e-132 | 49.20% (498) | acyl-CoA synthetase |
M. leprae Br4923 | MLBr_02546 | fadD2 | 1e-59 | 31.82% (506) | acyl-CoA synthetase |
M. abscessus ATCC 19977 | MAB_3435 | - | 1e-129 | 47.54% (509) | acyl-CoA synthetase |
M. marinum M | MMAR_0452 | fadD4 | 1e-129 | 46.80% (515) | fatty-acid-CoA ligase FadD4 |
M. smegmatis MC2 155 | MSMEG_0257 | - | 1e-137 | 49.21% (506) | acyl-CoA synthetase |
M. thermoresistible (build 8) | TH_4613 | - | 1e-138 | 49.80% (508) | PUTATIVE AMP-dependent synthetase and ligase |
M. ulcerans Agy99 | MUL_1191 | fadD2 | 1e-56 | 30.94% (501) | acyl-CoA synthetase |
M. vanbaalenii PYR-1 | Mvan_0218 | - | 1e-135 | 47.49% (518) | acyl-CoA synthetase |
CLUSTAL 2.0.9 multiple sequence alignment Mb0220|M.bovis_AF2122/97 ------------------------MPRGELYKRFRLVMGGIAPCGSGRRA Rv0214|M.tuberculosis_H37Rv ------------------------MPRGELYKRFRLVMGGIAPCGSGRRA MMAR_0452|M.marinum_M -------------------------------------------------- Mflv_0449|M.gilvum_PYR-GCK -------------------------------------------------- Mvan_0218|M.vanbaalenii_PYR-1 -------------------------------------------------- MSMEG_0257|M.smegmatis_MC2_155 -------------------------------------------------- TH_4613|M.thermoresistible__bu -------------------------------------------------- MAB_3435|M.abscessus_ATCC_1997 -------------------------------------------------- MAV_2951|M.avium_104 -------------------------------------------------- MLBr_02546|M.leprae_Br4923 ---------MTKLRHYLERGAAEVHYLRSIFESGALGFEPPLTYAAMAVA MUL_1191|M.ulcerans_Agy99 MPNLSDLPGVAKIQQYVDRGAAELHYVRKIIESGAFRLESPLNYAAMATE Mb0220|M.bovis_AF2122/97 ATYPRRMQIRPYIAAD--KPAVILYPSGTVISFDELEARANRLAHWFRQA Rv0214|M.tuberculosis_H37Rv ATYPRRMQIRPYIGAD--KPAVILYPSGTVISFDELEARANRLAHWFRQA MMAR_0452|M.marinum_M ------MQIRQHVGAD--KPAVILHPSGTVVSFDELEARANRLAHRFRRA Mflv_0449|M.gilvum_PYR-GCK ------MQIRDTAVATPDKPAVIMYPAGTVVTFGELEARANRLAHLFRDA Mvan_0218|M.vanbaalenii_PYR-1 ------MQIRDTAVATPDKPAIIMYPSGTVVTFGELEARANRLAHLFRDA MSMEG_0257|M.smegmatis_MC2_155 ------MQIREHVGAN--KPAIILYPSGTVVTFDELEARANRLAHHFRNQ TH_4613|M.thermoresistible__bu ------MQIREHAEATPDKPAVILYPSDKVVTFGELEARANRLAHFFREN MAB_3435|M.abscessus_ATCC_1997 ------MYPGAHAAQFPDKPAVVMAGSGATLTYGELDRQSRRLARHWYDS MAV_2951|M.avium_104 ------MNIAEHALAAAQSPALITD--GGTISYGELHDRSRRVAAALHEL MLBr_02546|M.leprae_Br4923 MRKWGDLAMLPAMPARRSPHRAALIDEEGTLTYKELDRAAHALANGLIAK MUL_1191|M.ulcerans_Agy99 IAKWGEFGMLPSFNARRHPHRAACIDEEGEFTYQQLDEAGHAVANALLAK : .:: :*. .. :* Mb0220|M.bovis_AF2122/97 GLREDDVVAILMENNEHVHAVMWAARRSGLYYVPINTHLTASEAAYIVDN Rv0214|M.tuberculosis_H37Rv GLREDDVVAILMENNEHVHAVMWAARRSGLYYVPINTHLTASEAAYIVDN MMAR_0452|M.marinum_M GLREGDAVAILMENNEHIHAVMWAARRSGLYYVPINTHLTAAEAAYIIEN Mflv_0449|M.gilvum_PYR-GCK GLVEGDAVALLMENNEHFHAVMWAARRAGLYYVPINTHLTAAEVAYIVDN Mvan_0218|M.vanbaalenii_PYR-1 GLVEGDAVAILMENNEHIHAVMWAARRAGLYYVPISTHLTAAEVAYIVDN MSMEG_0257|M.smegmatis_MC2_155 GLQEGDVVAILMENNSHIHTVMWAARRSGLYYVPISTHLTAAEAAYIVDN TH_4613|M.thermoresistible__bu GLREGDTVAILMENNDHIFTAMWAARRSGLYYVPINTHLTAAEAAYIIDN MAB_3435|M.abscessus_ATCC_1997 GLRKGDHVALLSDNVPEVFVVYWAALRSGLYITSVNHHLAPAEVSYIVND MAV_2951|M.avium_104 GLRRGDGVAVVLPNRPEFLEITWGCQLSGLYYTPVNTHFTADEVVYVIDD MLBr_02546|M.leprae_Br4923 GVRGGDGIAILARNHRWFVIANYGCARVGARIILLNSEFSGPQIKEVSER MUL_1191|M.ulcerans_Agy99 GVSAGDGVAILARNHRWFLIANYGAARAGARIILLNSEFSGPQIKEVSER *: .* :*:: * . :.. * :. .:: : : : Mb0220|M.bovis_AF2122/97 SGAKAIVGSAALRETCHGLAEHLPGGLPDLLMLAG-----------GGLV Rv0214|M.tuberculosis_H37Rv SGAKAIVGSAALRETCHGLAEHLPGGLPDLLMLAG-----------GGLV MMAR_0452|M.marinum_M SGAKAIVGSAALRDTCAGLGEHLRAGPPELLILAGPE---------GCLT Mflv_0449|M.gilvum_PYR-GCK SGAKAIVGSAKLADTLAGLEAELPNGLPQLLLVAG-AELSATSASGGDVD Mvan_0218|M.vanbaalenii_PYR-1 SGAKAIVGSAKLKDTLAGLAEELPNGLPPLRLIAGGAESSATSASS-ELE MSMEG_0257|M.smegmatis_MC2_155 SGAKAIVGSAKMRDVLAGLGDELPNGLPDTLLIAD-----------GDLD TH_4613|M.thermoresistible__bu SAAKAIIGSAALRDTLADLGEHLPGGLPELRMITD-----------SDLP MAB_3435|M.abscessus_ATCC_1997 SGSSALVVAAGVREQAEAILDDTP--AVTLRLAFG-----------GDVR MAV_2951|M.avium_104 SDAKAVFVDASLP----GIAARLRSANPAVHIGVG-----------GKLP MLBr_02546|M.leprae_Br4923 EGAKVIIYDDEYTKVVSKAEPALGKLRALGVNPDEEEP--------PGST MUL_1191|M.ulcerans_Agy99 EGAKLIIYDDEYTGAVSKAEPPLGKLRALGVNPDSEED--------SGST . :. :. Mb0220|M.bovis_AF2122/97 GWMTYPECVADQPDTPIEDEREGDLLQYSSGTTGRPKGIKRELPHVSPD- Rv0214|M.tuberculosis_H37Rv GWMTYPECVADQPDTPIEDEREGDLLQYSSGTTGRPKGIKRELPHVSPD- MMAR_0452|M.marinum_M GWEPYPQCVADQPDTAIDDELEGDLLQYSSGTTGRPKGIKRELLHVAPD- Mflv_0449|M.gilvum_PYR-GCK GWQRYPECVADKLETPIADEIDGDLLQYSSGTTGRPKGIKRELPHLPPA- Mvan_0218|M.vanbaalenii_PYR-1 GWQRYPECVADKPDTPIADEIEGDLLQYSSGTTGRPKGIKRELPHVPPS- MSMEG_0257|M.smegmatis_MC2_155 GWLRYPEAVADLPDTPIDDELDGDLLQYSSGTTGRPKGIKRELPHVHPS- TH_4613|M.thermoresistible__bu GWQRYPECVAGQPDTPIADELEGDLLQYSSGTTGRPKGIKRELPHVPPS- MAB_3435|M.abscessus_ATCC_1997 GYDSYEDALDGASDEPLPAQPAGSDMLYSSGTTGRPKGIKVPLTDRQVD- MAV_2951|M.avium_104 GWRDYEGVLGVAGDAPPVS--DGSEMLYSSGTTGRPKAVRRPLPQDGNGS MLBr_02546|M.leprae_Br4923 DETLAELIARSSSAPAPKVRKRASIIILTSGTTGTPKGANRNTPASLAP- MUL_1191|M.ulcerans_Agy99 DETLAELIARSSTAPAPKAGKHASIIILTSGTTGTPKGANRSTPPTLAP- . . .. : :***** **. . Mb0220|M.bovis_AF2122/97 -AAPGMMPALLDFWMDA-DSVYLSPAPMYHTAPSVWTMSALAAGVTTVVM Rv0214|M.tuberculosis_H37Rv -AAPGMMPALLDFWMDA-DSVYLSPAPMYHTAPSVWTMSALAAGVTTVVM MMAR_0452|M.marinum_M -AAPGMMSALVGYWMDA-DSIYLSPAPLYHTAPSVWSMSAQAGGITTVVL Mflv_0449|M.gilvum_PYR-GCK -EVPGMMAMLVEFWMHP-DAVYLSPAPLYHTAPSVWSMQVQAGGITTVVM Mvan_0218|M.vanbaalenii_PYR-1 -ESPGLMAALVSFWMHP-DAVYLSPAPLYHTAPSVWSMQTQAGGITTVVM MSMEG_0257|M.smegmatis_MC2_155 -ENPGMMAALISFWMTP-DSVYLSPAPLYHTAPSVWSMQVQAAGHTTVVM TH_4613|M.thermoresistible__bu -EAPGMLSMLVNVWMQPPDSVYLSPAPLYHTAPSMWSISAQAAGVTVVVL MAB_3435|M.abscessus_ATCC_1997 -EPNPFAMLFAHLYGFNAETVYLSPAPIYHAAPLRFCGFVQSMGGTAVVM MAV_2951|M.avium_104 WAQSVLELALIHKYGMTQRSVYLSPAPLYHAAGVNYTMAVNRVGAASIIM MLBr_02546|M.leprae_Br4923 ------LGGILSKVPFRAHEVTLLPAPMFHALGYLHATLAMFLGSTLVLR MUL_1191|M.ulcerans_Agy99 ------VGGILSHVPFKANEVTSLPAPMFHALGYLHATIAMFLGSTLVLR : : ***::*: . * : :: Mb0220|M.bovis_AF2122/97 EKFDAEGALDAIQRYRVTHAQFVPAMFVRMLKLPEAVRNSYDMSSLRRVI Rv0214|M.tuberculosis_H37Rv EKFDAEGALDAIQRYRVTHAQFVPAMFVRMLKLPEAVRNSYDMSSLRRVI MMAR_0452|M.marinum_M EKFDPEGALEAIQRHRVTHAQFVPAMFTRMLKLPESIRNSYDVSSLKRVM Mflv_0449|M.gilvum_PYR-GCK EKFDAEGALDAIQKYKVTHGQFVPVMFARMLKLPEDVRKSYDVSSLQRVM Mvan_0218|M.vanbaalenii_PYR-1 EKFDAEGALDAIAKHKVTHGQFVPVMFTRMLKLPEAVRKSYDVSSLERVM MSMEG_0257|M.smegmatis_MC2_155 EKFDAEGCLEAIQKHRVTHGQFVPAMFTRMLKLPESVRNSYDVSSLKRVM TH_4613|M.thermoresistible__bu EKFDPERCLEAIQKYRVTHGQFVPVMFTRMLKLPESVRNSYDVSSLKRVI MAB_3435|M.abscessus_ATCC_1997 ERFEAEEALAAIEKYRITHSQWVPTMFVRMLKLPKEIRDRYDVSSLKVAV MAV_2951|M.avium_104 RKFDAETVLRLIETHRVTHAQFVPTMFVRMLKLPEAVRDRYDVSSLRCVI MLBr_02546|M.leprae_Br4923 RRFKPATVLEDIEKHQATAMVVVPVMLSRILDTLENLETKSDLSSLRVVF MUL_1191|M.ulcerans_Agy99 RKFKPQLVLEDIEKHKVTAMVVVPVMLSRLLDAVEKIDKKPDLSSLKIVF .:*.. * * :: * **.*: *:*. : : *:***. .. Mb0220|M.bovis_AF2122/97 HAAAPCPVQIKEQMIHWWGPIIDEYYASSEASGSTLITAEDWLTHPGSVG Rv0214|M.tuberculosis_H37Rv HAAAPCPVQIKEQMIHWWGPIIDEYYASSEASGSTLITAEDWLTHPGSVG MMAR_0452|M.marinum_M HAAAPCPVEIKKQMMDWWGPIIDEYYASSEAIGSTLITAEDWLEHPGSVG Mflv_0449|M.gilvum_PYR-GCK HAAAPCPVEIKKQMIDWWGPIVDEYYASSEAHGSTLITADQWLERPGSVG Mvan_0218|M.vanbaalenii_PYR-1 HAAAPCPVDIKKQMIDWWGPIVDEYYASSEAHGSTLISAEDWLTHPGSVG MSMEG_0257|M.smegmatis_MC2_155 HAAAPCPVDIKKQMIDWWGPIVDEYYASSEAIGATLITAEEWLKHPGSVG TH_4613|M.thermoresistible__bu HAAAPCPVEIKKQMIDWWGPIIDEYYASSEAHGSTLISAEEWLQHPGSVG MAB_3435|M.abscessus_ATCC_1997 HAAAPCPVEVKQSMIDWWGPILYEYYSSTEGNGVTFIDCATWLKRPGSVG MAV_2951|M.avium_104 HAAAPCPVDVKHRMMRWFGPIIHEYYGGTEGFAGTTIGPQEWLAHPGSVG MLBr_02546|M.leprae_Br4923 VSGSQLGAELATRALEELGPVIYNMYGSTEIAFATIAGPKDLQINSATVG MUL_1191|M.ulcerans_Agy99 VSGSQLGAELASRALKDLGPVIYNMYGSTEIAFATIAGPEDLQRNAATVG :.: .:: : **:: : *..:* * ...:** Mb0220|M.bovis_AF2122/97 -KPIQGGVHIVGADGSELPPNQPGEIYFEGG-YPFEYLNDPAKTAASRNK Rv0214|M.tuberculosis_H37Rv -KPIQGGVHIVGADGSELPPNQPGEIYFEGG-YPFEYLNDPAKTAASRNK MMAR_0452|M.marinum_M -KPMQGGVHILGADGVELPPGQAGEIYFEGG-YSFEYLNDPSKTAASRDK Mflv_0449|M.gilvum_PYR-GCK -KPLTGVVHIVGEDGNELPAGQAGEIYFEGG-YDFEYLNDPDKTASSRHP Mvan_0218|M.vanbaalenii_PYR-1 -KPLTGVVHIVGEDGEELPPGQAGEIYFEGG-YDFEYLNDPDKTASSRHP MSMEG_0257|M.smegmatis_MC2_155 -KPLTGIVHVLDEDGNELPPGQAGEIFFEGG-QDFEYLNDAEKTASSRDA TH_4613|M.thermoresistible__bu -KPMLGAVHILDEDGNELPPGQPGEIYFEGG-NSFEYLNDPEKTAASRHP MAB_3435|M.abscessus_ATCC_1997 -SAALGVLHICDETGAELPAGEAGLVYFEREELPFSYHNDDEKTRSACHP MAV_2951|M.avium_104 -IPLA-PVHVLDEDGREVPVGQTGELYFEGG-PDFEYFKDPVKTASVYNE MLBr_02546|M.leprae_Br4923 PVVKGVKVKILDDSGKEVPRGQVGRIFVGNA-FPFEGYTGGGGKQIIDGL MUL_1191|M.ulcerans_Agy99 PVVKGVKVKILDDNGNEVSQGQVGRIFVGNA-FPFEGYTGGGHKQIIDGL ::: . * *:. .: * ::. *. .. . Mb0220|M.bovis_AF2122/97 HG--WVTVGDVGYLDDDGYLFLTGRRHHMIISGGVNIYPQEAENLLVAHP Rv0214|M.tuberculosis_H37Rv HG--WVTVGDVGYLDDDGYLFLTGRRHHMIISGGVNIYPQEAENLLVAHP MMAR_0452|M.marinum_M HG--WVTVGDVGYLDDQGYLFLTDRRHHMIISGGVNIYPQEAENILVTHP Mflv_0449|M.gilvum_PYR-GCK QG--WKTVGDIGYVDEEGFLFLTDRRHHMIISGGVNIYPQEAENLLVTHP Mvan_0218|M.vanbaalenii_PYR-1 QG--WKTVGDIGYLDDEGYLYLTDRRHHMIISGGVNIYPQEAENLLVTHP MSMEG_0257|M.smegmatis_MC2_155 RG--WKTVGDIGYLDEEGYLYLTDRRHHMIISGGVNIYPQEAENMLVTHP TH_4613|M.thermoresistible__bu KG--WVTVGDVGYVDEDGYLYLTDRRHHMIISGGVNIYPQEAENMLVTHP MAB_3435|M.abscessus_ATCC_1997 AHDTWTTTGDIGYVDEDGFLYLTDRKAFMIISGGVNIYPQEIENALALHP MAV_2951|M.avium_104 RG--WRSLGDMGHLDEDGYLYLTDRSTFTIVSGGVNIYPQEVENLLVMHP MLBr_02546|M.leprae_Br4923 LS-----SGDVGYFDEHDLLYISGRDDEMIVSGGENVFPAEVEDLISGHP MUL_1191|M.ulcerans_Agy99 MS-----SGDVGYFDEHGLLYVSGRDDEMIVSGGENVFPAEVEALISGHP **:*:.*:.. *:::.* *:*** *::* * * : ** Mb0220|M.bovis_AF2122/97 KVLDAAVFGVPDDEMGQRVMAAVQTVDSADANDQFAGELLAWLRDRLSHF Rv0214|M.tuberculosis_H37Rv KVLDAAVFGVPDDEMGQRVMAAVQTVDSADANDQFAGELLAWLRDRLSHF MMAR_0452|M.marinum_M KVMDAAVFGVPDDEMGQRVMAVVQTVDPADATSQFGDELMEWLRDRLSHF Mflv_0449|M.gilvum_PYR-GCK KVMDAAVFGIPDEEMGQRVKAVVQLVDQADATEEFADELIGWLRDRLAHY Mvan_0218|M.vanbaalenii_PYR-1 KVMDAAVFGIPDEEMGQSVKAVVQTVDPADATEEFAAELISWLRDRLAHY MSMEG_0257|M.smegmatis_MC2_155 KVMDAAVFGVPDDEMGQSVKGVVQTVDPADATPEFGEELLAWLRDRLAHY TH_4613|M.thermoresistible__bu KVMDAAVFGVPDEEMGERVKAVVQLVDPSEASDELAAELIEWLRDRLAHY MAB_3435|M.abscessus_ATCC_1997 AVLDVAVIGVPDAEMGESVKAVVQPADSSAAPRELAAELTDFLRERIARY MAV_2951|M.avium_104 KLLDAAVFGVPNDEFGEEVKAVVQPADGVPPGPDLAAELIAYCRAHLAGY MLBr_02546|M.leprae_Br4923 EVVEATAIGVDDKEWGARLRAFVVKKQDATID---EDAIKAYVRDHLARY MUL_1191|M.ulcerans_Agy99 DVVEATALGVDDKEWGARLRAFVVKKPDTDLD---EETVKHYVRDHLARY :::.:.:*: : * * : . * : : * ::: : Mb0220|M.bovis_AF2122/97 KCPRSIAFEPQLPRTDTGKLYKSGLVEKYSV------- Rv0214|M.tuberculosis_H37Rv KCPRSIAFEPQLPRTDTGKLYKSGLVEKYSV------- MMAR_0452|M.marinum_M KCPRSVAFEAQLPRTDTGKLYKNGLIEKYSG------- Mflv_0449|M.gilvum_PYR-GCK KCPRSLSFEEQLPRTDTGKLYKQELIKKYS-------- Mvan_0218|M.vanbaalenii_PYR-1 KCPRSLSFEAQLPRTDTGKLYKQELVKKHS-------- MSMEG_0257|M.smegmatis_MC2_155 KCPRSISFELQLPRTDTGKLYKQELIAKYS-------- TH_4613|M.thermoresistible__bu KCPRSISFEEQLPRTDTGKLYKQELIKKYS-------- MAB_3435|M.abscessus_ATCC_1997 KVPRSFDFTDTLPRTPTGKLAKGLLRQKYWEGAQ---- MAV_2951|M.avium_104 KCPRTVEFD-TLPRDPNGKLYKRRIRERYWQGRESRIV MLBr_02546|M.leprae_Br4923 KVPREVIFLEELPRNPTGKVLKRELRDFEVH------- MUL_1191|M.ulcerans_Agy99 KVPREVIFLEELPRNPTGKILKRELREMEIE------- * ** . * *** .**: * :