For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VSLKRRVVHRVQRLLVNPVGRQLPMTMLETTGRKSGKPRRTAVGGRVVDNQFWMVSEHGEHSDYVRNIKA NPAVRVRVGGRWRTGTAHLLPDDDPVQRLGNLPRLNSAMVRLMGSDLLTIRVDLD
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. avium 104 | MAV_2845 | - | - | 100% (125) | hypothetical protein MAV_2845 |
M. avium 104 | MAV_1448 | - | 2e-06 | 30.19% (106) | hypothetical protein MAV_1448 |
M. avium 104 | MAV_3285 | - | 1e-05 | 42.03% (69) | hypothetical protein MAV_3285 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1902c | - | 1e-58 | 84.00% (125) | hypothetical protein Mb1902c |
M. gilvum PYR-GCK | Mflv_4462 | - | 1e-31 | 55.00% (120) | hypothetical protein Mflv_4462 |
M. tuberculosis H37Rv | Rv1871c | - | 1e-58 | 84.00% (125) | hypothetical protein Rv1871c |
M. leprae Br4923 | MLBr_02048 | - | 2e-20 | 61.64% (73) | hypothetical protein MLBr_02048 |
M. abscessus ATCC 19977 | MAB_4636 | - | 7e-18 | 42.71% (96) | hypothetical protein MAB_4636 |
M. marinum M | MMAR_2750 | - | 3e-59 | 83.74% (123) | hypothetical protein MMAR_2750 |
M. smegmatis MC2 155 | MSMEG_3204 | - | 6e-07 | 32.69% (104) | hypothetical protein MSMEG_3204 |
M. thermoresistible (build 8) | TH_0359 | - | 1e-05 | 35.00% (80) | CONSERVED HYPOTHETICAL PROTEIN |
M. ulcerans Agy99 | MUL_3004 | - | 2e-59 | 83.74% (123) | hypothetical protein MUL_3004 |
M. vanbaalenii PYR-1 | Mvan_1899 | - | 5e-34 | 54.84% (124) | hypothetical protein Mvan_1899 |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_4462|M.gilvum_PYR-GCK -------------MAETTRDRVTKFFQKNIANRVMRHIPI---------- Mvan_1899|M.vanbaalenii_PYR-1 ------------MTADTLRDRVTKFFQKNVANRVMRQMPF---------- Mb1902c|M.bovis_AF2122/97 -----------MNAAMNLKREFVHRVQRFVVNPIGRQLP----------- Rv1871c|M.tuberculosis_H37Rv -----------MNAAMNLKREFVHRVQRFVVNPIGRQLP----------- MAV_2845|M.avium_104 ---------------MSLKRRVVHRVQRLLVNPVGRQLP----------- MMAR_2750|M.marinum_M -----------MAELRDLKRRVVHRMQKLVVNPIGRQLP----------- MUL_3004|M.ulcerans_Agy99 -----------MAELRDLKRRVVHRMQKLVVNPIGRQLP----------- MLBr_02048|M.leprae_Br4923 -----------MTNLWDLKQKVIYSIQWLVVNSLGHQLP----------- MAB_4636|M.abscessus_ATCC_1997 -------MDHDPAAPQEQRRRSIPKKEKFMTDKTLRKFRRERAMGRYLLN MSMEG_3204|M.smegmatis_MC2_155 ------------MLFPPWLERLQLKYVNPVMTPVAKRLPG---------- TH_0359|M.thermoresistible__bu VSARGIRNSRWLASALKHFARGHIRVYRRSNGVLGSRLLWFP-------- . :: Mflv_4462|M.gilvum_PYR-GCK ---------------QTLLETTGRKSGLPRTTPLGGRRIGDEFWFVSEFG Mvan_1899|M.vanbaalenii_PYR-1 ---------------QTLLETTGRKSGQPRTTPLGGRRIGDAFWFVSEFG Mb1902c|M.bovis_AF2122/97 ---------------MTMLETIGRKTGQPRRTAVGGRVVDNQFWMVSEHG Rv1871c|M.tuberculosis_H37Rv ---------------MTMLETIGRKTGQPRRTAVGGRVVDNQFWMVSEHG MAV_2845|M.avium_104 ---------------MTMLETTGRKSGKPRRTAVGGRVVDNQFWMVSEHG MMAR_2750|M.marinum_M ---------------VTMLETIGRKSGQPRHTAVGGKLVDNQFWMVSEHG MUL_3004|M.ulcerans_Agy99 ---------------VTMLETIGRKSGQPRHTAVGGKLVDNQFWMVSEHG MLBr_02048|M.leprae_Br4923 ---------------RTMLETIRRKTGQPWRTAAGVHPVDNQFGMVCENS MAB_4636|M.abscessus_ATCC_1997 PAVGALAKLGVRTALASELETTGRKTGQLRRVPVSVQFDSTGAWVICQHG MSMEG_3204|M.smegmatis_MC2_155 ---------------FTVIKHRGRKSGRAYETVVNSYRKDNVFAVILAHG TH_0359|M.thermoresistible__bu ---------------AALLTTIGRRTGEPRTTPTLYLRDGDRVILPASFG : : *::* . . . . Mflv_4462|M.gilvum_PYR-GCK D---RSQYVRNIMADQNVRLRLRG-RWHRGIAHLLPEDDAQARMRMLPRY Mvan_1899|M.vanbaalenii_PYR-1 D---RSQYIRNIQADPNVRVRLNG-RWHRGTAHLLPEDDARARMRTLPGY Mb1902c|M.bovis_AF2122/97 E---HSDYVYNIKANPAVRVRIGG-RWRSGTAYLLPDDDPRQRLRGLPRL Rv1871c|M.tuberculosis_H37Rv E---HSDYVYNIKANPAVRVRIGG-RWRSGTAYLLPDDDPRQRLRGLPRL MAV_2845|M.avium_104 E---HSDYVRNIKANPAVRVRVGG-RWRTGTAHLLPDDDPVQRLGNLPRL MMAR_2750|M.marinum_M E---HSDYVRNIKANPAVRVRLDG-EWRSGTAHLLPDDDPLQRLGNLPRL MUL_3004|M.ulcerans_Agy99 E---HSDYVRNIKANPAVRVRLDG-EWRSGTAHLLPDDDPLQRLGNLPRL MLBr_02048|M.leprae_Br4923 E---YSDYVYNIKANTAVRTHKS-------------------KI------ MAB_4636|M.abscessus_ATCC_1997 T---RSGWGSNIAANPNVRVRQGN-RWRTGTAQFRPDDDVVARGRGFGVI MSMEG_3204|M.smegmatis_MC2_155 ----KTNWVKNVLAAGGAEVKVFGREFEITNPRILPAGSDDPSLPRIARL TH_0359|M.thermoresistible__bu GRSEHPQWYRNLRANPRVHVQIGA-RHLDLVARDATAAERDRYWPELTRI . : *: * .. : Mflv_4462|M.gilvum_PYR-GCK NNVGVRTFGTNLLTIRVDLID- Mvan_1899|M.vanbaalenii_PYR-1 NNVGVRTFGTNLLTVRVDLID- Mb1902c|M.bovis_AF2122/97 NSAGVRAMGTDLLTIRVDLD-- Rv1871c|M.tuberculosis_H37Rv NSAGVRAMGTDLLTIRVDLD-- MAV_2845|M.avium_104 NSAMVRLMGSDLLTIRVDLD-- MMAR_2750|M.marinum_M NSAVVRAIGSELLSIRVDLD-- MUL_3004|M.ulcerans_Agy99 NSAVVRAIGSELLSIRVDLD-- MLBr_02048|M.leprae_Br4923 ---------------------- MAB_4636|M.abscessus_ATCC_1997 GARVVKALETTPISVRIDFTD- MSMEG_3204|M.smegmatis_MC2_155 SARKAGILVAEIV--------- TH_0359|M.thermoresistible__bu YPPYRGYRDATDRVIPLVVCEP