For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
LLRHRRKILCAYSFGERAMGSVAQRQLHRWVVGASGRARSRRCRPSARPADRRPAQAGGAATTADAFLGC VRDGRRLRLVDAVMTQNDVIVARASALFLRRSEHAVDTVWTSPVTMPAVPAEPDVLNDDVPMVFHSFGRD PVAGSPGVGIKEWRHHGQKFAWMRETKFLVDDEPLSPFTRAVMAGDVTSSLTHWGTEGLQFINADYTITL SRLPEGVYIGLASVTHYSHAGVATGVATLFDETGPIGSGMATALSNPGFTPPPSMVVS*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. avium 104 | MAV_2603 | - | - | 100% (269) | hypothetical protein MAV_2603 |
M. avium 104 | MAV_1885 | - | 4e-96 | 83.16% (196) | hypothetical protein MAV_1885 |
M. avium 104 | MAV_3659 | - | 9e-55 | 54.01% (187) | hypothetical protein MAV_3659 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | - | - | - | - | - |
M. gilvum PYR-GCK | Mflv_0790 | - | 2e-53 | 54.69% (192) | hypothetical protein Mflv_0790 |
M. tuberculosis H37Rv | - | - | - | - | - |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_2154c | - | 9e-07 | 28.80% (191) | hypothetical protein MAB_2154c |
M. marinum M | MMAR_0390 | - | 1e-08 | 30.11% (93) | hypothetical protein MMAR_0390 |
M. smegmatis MC2 155 | MSMEG_3458 | - | 2e-51 | 51.56% (192) | hypothetical protein MSMEG_3458 |
M. thermoresistible (build 8) | TH_4503 | - | 3e-50 | 51.04% (192) | PUTATIVE conserved hypothetical protein |
M. ulcerans Agy99 | MUL_2342 | - | 2e-07 | 26.94% (193) | hypothetical protein MUL_2342 |
M. vanbaalenii PYR-1 | Mvan_0060 | - | 1e-50 | 52.36% (191) | hypothetical protein Mvan_0060 |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_0790|M.gilvum_PYR-GCK -----MSS----RAFFLPDGDAFAPTDWARGPWGQTISG-NYVGGLLGHV Mvan_0060|M.vanbaalenii_PYR-1 -----MTT----RAYFLPDRDGFVPTALARGPWGGTISG-NYVGGLLGHV TH_4503|M.thermoresistible__bu -----MSTSATRAAYFGIDGDRYIPSPLTKGPWGDQLSG-TFIGGLLAHA MSMEG_3458|M.smegmatis_MC2_155 -----MDRNG-LTPYFMRRDDGFVPNEIAHGGWGPTLGG-HVVGGLLARA MAV_2603|M.avium_104 -----MLLR-----HRRKILCAYSFGERAMGSVAQRQLH-RWVVGASGRA MAB_2154c|M.abscessus_ATCC_199 MTLDLTGCYYRRLD-ADGEFQVFESTELTASGWGPNLQHGSPPMALLLKA MUL_2342|M.ulcerans_Agy99 ----MNGCYYRRLPGADGDYQMFDSTDFTRSNWDPDIQHGSPPLALLTKL MMAR_0390|M.marinum_M ----MTDSYYELIDDADALGEKFAATDLVRGTWSASIQHGAPVSALLVRA : . . . : Mflv_0790|M.gilvum_PYR-GCK IERDTGH-PDLQPARLTVDLCRPATLTEPVSVATTVVREGRRLTLVDAVM Mvan_0060|M.vanbaalenii_PYR-1 IDRDTGD-PELQPARLTVDLMRPVAM-APVQVQTSVVRSGRRLKLVEASM TH_4503|M.thermoresistible__bu VERDAWD-ADFHPTRFTVDLLRPVAL-APMRLRTTVVRSSSRLRLVDSEI MSMEG_3458|M.smegmatis_MC2_155 IERHVDD-AELQPARLTVEILRRVAS-APVRVSASVVRSGSRMKALDAEM MAV_2603|M.avium_104 RSRRCR--PSARPADRRPAQAGGAATTADAFLG--CVRDGRRLRLVDAVM MAB_2154c|M.abscessus_ATCC_199 IEELPEPRENLRIGRVALDILGPVPLEP-VRVRAWIERPGRRIALAVAEM MUL_2342|M.ulcerans_Agy99 IEELSAG-SGLRIGRFSLDILGAIPVAP-VRARAWVQRPGSRVAMMVAEM MMAR_0390|M.marinum_M LQRCAWR-EDTRLSRVVVDLIGAVPADGDLWVSSRIERGGKQIELVSAEL .. : . * . :: : : Mflv_0790|M.gilvum_PYR-GCK TQGG-----NFVARASTLFLRRGEQPPGPRFTTTVAMPEVP-RADSVPDD Mvan_0060|M.vanbaalenii_PYR-1 TQSG-----TVVARASALMLRRGEQPPGPRWSTPVRMPPVPPLPDPPPKR TH_4503|M.thermoresistible__bu VQDD-----TVVSRASTLLLRPGDHPPGKVWSTPVDVPPRPSRFPDTGFA MSMEG_3458|M.smegmatis_MC2_155 TQQG-----EVVARASALYLRRGVQPGGRFWSTPVDLPPIPREPERFDDT MAV_2603|M.avium_104 TQND-----VIVARASALFLRRSEHAVDTVWTSPVTMPAVPAEPDVLNDD MAB_2154c|M.abscessus_ATCC_199 EARA-NGGYRAVARASAWLLATSVT------ADKASDR-FPPLPEYPAGP MUL_2342|M.ulcerans_Agy99 VA------DRVLARVTAWLLAVSDT------TDVASDR-YPPLVEGPAQP MMAR_0390|M.marinum_M AAPGPDGRPRAVARASGWRLAQLDT------QELRHAAEQPPRPLAEARN ::*.: * * Mflv_0790|M.gilvum_PYR-GCK IATLVWSYGKDGDTPRMG--LDAWTYAGPKYIWALELAPIVAGTELTPFE Mvan_0060|M.vanbaalenii_PYR-1 AVLMVWSYGNNGDTPAPG--LDAWRYDGPKRIWTCDLGPLVAGTEQSAFT TH_4503|M.thermoresistible__bu GGMAFWLYGADLDNPTAGPDFTPWQYVGPKHGWVRELNPLIDGVDLTPFT MSMEG_3458|M.smegmatis_MC2_155 VPMFITPYGAPPGSIDSP---FPWQYDGPRYAWLREVRDLVDGEELTPLL MAV_2603|M.avium_104 VPMVFHSFGRDPVAGSPGVGIKEWRHHGQKFAWMRETKFLVDDEPLSPFT MAB_2154c|M.abscessus_ATCC_199 TPQAFGFEGSNYSKSVDFQWFTVPNGE-PQVAWMRPHVHIVDTEPTTPWQ MUL_2342|M.ulcerans_Agy99 RPAAFAGVGG-YFDALSWRPQDTEGQP-AAVSWFRPTAHIVDTDPASPLQ MMAR_0390|M.marinum_M RKLAPMSWDRNYVHSLDWRWLTEPMTPGPGECWIKPTVDLVNGETMTPLE . * :: :. Mflv_0790|M.gilvum_PYR-GCK RAALAGDMASSL-THFGEDGLPFINADYTLTLSRLPDGPYLGLAALTHDS Mvan_0060|M.vanbaalenii_PYR-1 RAAVVGEMASSL-THFGVDGLPFINADYTLTLSRLPETPYLGLAALTHFS TH_4503|M.thermoresistible__bu RAALAGDITSSL-TQFGDAGLYYINPDYTLTLSRLPDGPDIGLSAVTHYS MSMEG_3458|M.smegmatis_MC2_155 RAALAVDVTSSL-TNFSTDGLAFINADYTLTLSRLPRGLYIGMAALVHAS MAV_2603|M.avium_104 RAVMAGDVTSSL-THWGTEGLQFINADYTITLSRLPEGVYIGLASVTHYS MAB_2154c|M.abscessus_ATCC_199 RLASVIDSANGIGAVLNPLRFVYMNTDTVMHVHRIPQGDEFGVRARMSVG MUL_2342|M.ulcerans_Agy99 QLAAVVDCANGVGAILDPNRFLFMNTDTVVHLHRLPTGTDFALRARASVG MMAR_0390|M.marinum_M RLFAVADCANGIGSKLDITKWTFLNTDLAVHVFRIPAGDWIGIRAETSYG : . : :..: : . ::*.* .: : *:* :.: : . Mflv_0790|M.gilvum_PYR-GCK AAGVATGTAIVVDETGPLGTATATALANPGFSPP-----------RAFS- Mvan_0060|M.vanbaalenii_PYR-1 HAGVATGTAVVVDELGPIGTATATAVANPGFDPA-----------HPIG- TH_4503|M.thermoresistible__bu HAGIATGVATLFDRRGPIGSAMATGLAHGGFRAPTLDEVEKLGGIRPNGA MSMEG_3458|M.smegmatis_MC2_155 AEGVATGTAALFDQDGPIGTGVSTAVANFNFTPN-------VEVDKVTGE MAV_2603|M.avium_104 HAGVATGVATLFDETGPIGSGMATALSNPGFTPP-----------PSMVV MAB_2154c|M.abscessus_ATCC_199 PDGVGVTTAEIFDRQGHIGSSAQTVLVQRR-------------------- MUL_2342|M.ulcerans_Agy99 PDGLGVTTAEIFDTTGFVGTSAQTLLVRRR-------------------- MMAR_0390|M.marinum_M PDGIGTAAGTLFDQQGAVGTIAQSVLVRRRAR------------------ *:.. .. :.* * :*: : : . Mflv_0790|M.gilvum_PYR-GCK --- Mvan_0060|M.vanbaalenii_PYR-1 --- TH_4503|M.thermoresistible__bu AG- MSMEG_3458|M.smegmatis_MC2_155 SRI MAV_2603|M.avium_104 S-- MAB_2154c|M.abscessus_ATCC_199 --- MUL_2342|M.ulcerans_Agy99 --- MMAR_0390|M.marinum_M ---