For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
TTDTYFANGNEVQLFEQAFARRLPVMLTGPTGCGKTRFVEHMGSLLQRPVVTISCHDDLTSSDLVGRFMV TGGDVVWTDGPLTRAVKAGAICYLDEVVEARHDSLAILHSLTDHRRSLYLDRAGEVVKAPEGFMLVCSYN PAYRSSLKELKPSFRQRFVTLAMHYLPPDREADVIVAESGIPLATAQRLVRCAVAIRTADEAFHFEPPST RVLVTAAQLIAAGATELDAADACILAPLSSDGAVTDGLREVAAASLATSNSSP*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. avium 104 | MAV_2455 | - | - | 100% (264) | CbbQ/NirQ/NorQ/GpvN family protein |
M. avium 104 | MAV_1270 | - | 3e-65 | 49.81% (257) | putative denitrification regulatory protein nirQ |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | - | - | - | - | - |
M. gilvum PYR-GCK | Mflv_1772 | - | 1e-129 | 86.31% (263) | ATPase |
M. tuberculosis H37Rv | - | - | - | - | - |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_0653 | - | 3e-06 | 24.86% (185) | MoxR-like ATPase |
M. marinum M | - | - | - | - | - |
M. smegmatis MC2 155 | MSMEG_6809 | cbbQ | 5e-63 | 47.22% (252) | CbbQ protein |
M. thermoresistible (build 8) | TH_4050 | - | 1e-128 | 84.41% (263) | PUTATIVE ATPase associated with various cellular activities, |
M. ulcerans Agy99 | - | - | - | - | - |
M. vanbaalenii PYR-1 | Mvan_4975 | - | 1e-129 | 87.40% (262) | ATPase |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_1772|M.gilvum_PYR-GCK -----------------------MTD-TYLANGTEVQLFEQAYRQRLP-- Mvan_4975|M.vanbaalenii_PYR-1 -----------------------MTEQTYLANGNEVRLFEQACRQRLP-- TH_4050|M.thermoresistible__bu -----------------------LTAKTYFSNGDEVRLFEQAYRQRLP-- MAV_2455|M.avium_104 -----------------------MTTDTYFANGNEVQLFEQAFARRLP-- MSMEG_6809|M.smegmatis_MC2_155 --------------MSDAAVVLENRSPFYVPVADEAEVFRAAARRGTP-- MAB_0653|M.abscessus_ATCC_1997 MTAATQTQPSRQELDQARAVIQAVARAFSVKVVGQSGLQQSLLIGLLTGG . : : . . Mflv_1772|M.gilvum_PYR-GCK -VMLTGPTGCGKTRLVEHMGLLLGRPVVTISCHDDLTSSDLVGRFMVTGG Mvan_4975|M.vanbaalenii_PYR-1 -VMLTGPTGCGKTRLVEHMGLLLGRPVVTISCHDDLTSSDLVGRFIVTGG TH_4050|M.thermoresistible__bu -VMLTGPTGCGKTRLIEHMGALLGRPVVTISCHDDLTSADLVGRFMVTGG MAV_2455|M.avium_104 -VMLTGPTGCGKTRFVEHMGSLLQRPVVTISCHDDLTSSDLVGRFMVTGG MSMEG_6809|M.smegmatis_MC2_155 -VLLKGPTGCGKTRFVESMAHELGRDLITVAGHEDMTSADLVGRFLLKGG MAB_0653|M.abscessus_ATCC_1997 HVLLESVPGLAKTTAARAIADAIQAQFRRIQCTPDLLPSDIIGTQIFDAS *:* . .* .** . :. : . : *: .:*::* :. .. Mflv_1772|M.gilvum_PYR-GCK DVTWTDGPLTRAVKTGTICYLDEVVEARHDSLAVLHSLTDHRRTLYLDRA Mvan_4975|M.vanbaalenii_PYR-1 DVVWTDGPLTRAVKAGAICYLDEVVEARHDSLAVLHSLTDHRRTLYLDRA TH_4050|M.thermoresistible__bu DVVWTDGPLTRAVKEGAICYLDEVVEARHDSLAVLHSLTDHRRTLYLDRA MAV_2455|M.avium_104 DVVWTDGPLTRAVKAGAICYLDEVVEARHDSLAILHSLTDHRRSLYLDRA MSMEG_6809|M.smegmatis_MC2_155 ETIWVDGPLTRAVRTGAICYLDEIVEARQDTTVVIHPLADHRRELPIDRL MAB_0653|M.abscessus_ATCC_1997 KGTFKT---QLGPVHANIVLLDEINRSSAKTQSAMLEAMEERQTS---IA . : . . * ***: .: .: : :.*: Mflv_1772|M.gilvum_PYR-GCK GEVVAAPETFMLVCSYNPAYRSSLKELKPSFRQRFVTLPMRYLP-PEREA Mvan_4975|M.vanbaalenii_PYR-1 GEVVRAPEEFMLVCSYNPAYRSSLKELKPSFRQRFVTLPMCYLP-PDREA TH_4050|M.thermoresistible__bu GEVVAAPENFMLVCSYNPAYRSSLKDLKPSFRQRFVTLPMSYLP-PEREA MAV_2455|M.avium_104 GEVVKAPEGFMLVCSYNPAYRSSLKELKPSFRQRFVTLAMHYLP-PDREA MSMEG_6809|M.smegmatis_MC2_155 GTTLSAVPGFQLVISYNPGYQSVLKSIKESTRQRFIAIELDFPP-PHVET MAB_0653|M.abscessus_ATCC_1997 GEIYKIPEPFLVLATQNPVDQEGTYPLPEAQMDRFMFKEILTYPNPAEEA * * :: : ** :. : : :**: : * * *: Mflv_1772|M.gilvum_PYR-GCK EVIV--------AETGVATATAERLVRCATAIR----------------- Mvan_4975|M.vanbaalenii_PYR-1 EVIV--------AEAGIGLPTAQRLVRCATAIR----------------- TH_4050|M.thermoresistible__bu EVIV--------AETGVPLAVARRLVQCAVAIR----------------- MAV_2455|M.avium_104 DVIV--------AESGIPLATAQRLVRCAVAIR----------------- MSMEG_6809|M.smegmatis_MC2_155 EIVA--------HEAGVDADTARALVSVGAAIR----------------- MAB_0653|M.abscessus_ATCC_1997 EVVFRIDAGVYTNHQGAPVASIQDILYIQDVVRRIYVDPAIVHYVTQIVN ::: . * . :: .:* Mflv_1772|M.gilvum_PYR-GCK TADEAFHFEPPSTRVLVTAAQLIAAGATELEAAEACVLAPLSS------- Mvan_4975|M.vanbaalenii_PYR-1 TADEAFHFEPPSTRVLVTAAHLIAAGASELEAAEACVLAPLSS------- TH_4050|M.thermoresistible__bu TADAAFHFEPPSTRVLVTAGHLIAAGAGELDAAEACILAPLSS------- MAV_2455|M.avium_104 TADEAFHFEPPSTRVLVTAAQLIAAGATELDAADACILAPLSS------- MSMEG_6809|M.smegmatis_MC2_155 NIDGSPLREVASTRMLILAGGLVAEGLPLRRAVRAAIVEALSD------- MAB_0653|M.abscessus_ATCC_1997 VTRNPKQYLPPNLARLIEYGASPRATIAFCKAARALALLADRNHVLPDDI . .. *: . *. * : . . Mflv_1772|M.gilvum_PYR-GCK --------DGAIAEGLREVAAAGLAAAGNPSPNR----- Mvan_4975|M.vanbaalenii_PYR-1 --------DGGVSEGLREVAAASLADADSPNPNR----- TH_4050|M.thermoresistible__bu --------DGAVGDGLREVAVACLTGADSSS-------- MAV_2455|M.avium_104 --------DGAVTDGLREVAAASLATSNSSP-------- MSMEG_6809|M.smegmatis_MC2_155 --------DHDIIRALGELVDAHLP-------------- MAB_0653|M.abscessus_ATCC_1997 KALAHRILRHRLILGFEAVAENVTAEVLIDNIIQAVRTP : .: :. .