For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
TPVMQAASDFALIGGIGFTAFGIYLSVRRRRLHPLLLLCISAMSFSWIDAPYDWAMYAQFPPAIPRMPSW WPLNMTWGGLPLFVPIGYISYFVLPAVTGTALGRWLSARFGWRRPQTLLVVGLVVGFCWALFFNGFLGAK LGVFYYGRVIPGLAIREGTVHQYPLYDSVAMAIQMMLFTYLLGRTDAQGRNVIEMWAEHRSKSRVGASVL SVVAVVVIGNALYGAVFAPHLVTKLGGWVTAGPTGELFPGVPNQPR*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. avium 104 | MAV_2134 | - | - | 100% (257) | hypothetical protein MAV_2134 |
M. avium 104 | MAV_2655 | - | 1e-12 | 28.34% (187) | hypothetical protein MAV_2655 |
M. avium 104 | MAV_1272 | - | 5e-12 | 27.85% (219) | hypothetical protein MAV_1272 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | - | - | - | - | - |
M. gilvum PYR-GCK | Mflv_4146 | - | 1e-109 | 69.77% (258) | hypothetical protein Mflv_4146 |
M. tuberculosis H37Rv | - | - | - | - | - |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. marinum M | - | - | - | - | - |
M. smegmatis MC2 155 | MSMEG_6808 | - | 2e-07 | 25.86% (174) | hypothetical protein MSMEG_6808 |
M. thermoresistible (build 8) | - | - | - | - | - |
M. ulcerans Agy99 | - | - | - | - | - |
M. vanbaalenii PYR-1 | Mvan_4195 | - | 4e-06 | 28.70% (115) | hypothetical protein Mvan_4195 |
CLUSTAL 2.0.9 multiple sequence alignment MSMEG_6808|M.smegmatis_MC2_155 ---------------------MSELSDKKAAATESLRSVGRLDAPPAAKP Mvan_4195|M.vanbaalenii_PYR-1 MQPAGSAAPPTASTIVKGKPIMSDLS-RKPAVTESVSGTADLGKQGPSQ- MAV_2134|M.avium_104 ----------------------------MTPVMQAASDFALIG------- Mflv_4146|M.gilvum_PYR-GCK ------------------------MGGELSPALIAGLSFAYIG------- ... : . . :. MSMEG_6808|M.smegmatis_MC2_155 SRRVKIWATAGGIILAFQIYVWIRWITGPYFTRVDPGPTDPPTFMKIALM Mvan_4195|M.vanbaalenii_PYR-1 SNAFKVWATVGAVFLAYTLYVFIRWVSGPYFEPVAGGPSEPPLYMKIPLM MAV_2134|M.avium_104 ----------GIGFTAFGIYLSVRRRR-----------LHPLLLLCISAM Mflv_4146|M.gilvum_PYR-GCK ----------GVVFLAFGVYLSIRRGR-----------LHPLLLVSISAI * : *: :*: :* .* : *. : MSMEG_6808|M.smegmatis_MC2_155 MWQIGSPVLFPVAIWWFIIRPWRRERRITLDGMIMVSTGLFFFQDPLLNY Mvan_4195|M.vanbaalenii_PYR-1 ANAVVLWIGLPFALWFFLIRPWVREKRITLDGMLLVSMGLMMFQDPMLNY MAV_2134|M.avium_104 S-------------FSWIDAPYDWAMYAQFP--------------PAIPR Mflv_4146|M.gilvum_PYR-GCK S-------------FSWIEAPYDWAVYAQFP--------------PELPR : :: *: : * : MSMEG_6808|M.smegmatis_MC2_155 INTWCTYNAWAFNMGSWAPHVPGWMSPEKPGAQVAEPLGINVSGYAYGVL Mvan_4195|M.vanbaalenii_PYR-1 YSTWCTYNAWLFNQGSWAPHIPGWVAHEEPGHTVPEPLLTNIPGYMYGVL MAV_2134|M.avium_104 MPSWWPLN------MTWGG-LPLFVP----------------IGYISYFV Mflv_4146|M.gilvum_PYR-GCK MPSWWPMN------MTWGGGLPSAVP----------------IGYIAYFV :* . * :*. :* :. ** .: MSMEG_6808|M.smegmatis_MC2_155 LCTILGCWIMRKAQQRWPNLGTKGLIGVAFAWGFVFDFVMEGLVLMPLGM Mvan_4195|M.vanbaalenii_PYR-1 LLTIVGCALMRKIKNRWPGISNLRLVLVTYAVAIVFDFIMEGLILLPIGF MAV_2134|M.avium_104 LPAVTGTALGRWLSARFGWRRPQTLLVVGLVVGFCWALFFNGFLGAKLGV Mflv_4146|M.gilvum_PYR-GCK LPAVIGAALGRRVIARFGWRRPQTLLIVGFLVGFGWALLFNGFFGPRLGV * :: * : * *: *: * .: : :.::*:. :*. MSMEG_6808|M.smegmatis_MC2_155 YTFPGAIQSLSINAGTYYQWPIYEGLMWGGVQAALCCLRFFTDDRGRTVV Mvan_4195|M.vanbaalenii_PYR-1 YSYPGAIQELSINAGTYYQYPIYEGFMWGGVQAALCCLRFFTDDRGRTVV MAV_2134|M.avium_104 FYYGRVIPGLAIREGTVHQYPLYDSVAMAIQMMLFTYLLGRTDAQGRNVI Mflv_4146|M.gilvum_PYR-GCK FVYGYVIDGLAIFEGSRYQYPVYDAVAMGLQMMVFTYLLGRVDEQGRNVI : : .* *:* *: :*:*:*:.. . : * .* :**.*: MSMEG_6808|M.smegmatis_MC2_155 EKGLDNVRGGFAKQQLVRFLAIFAAISASFFTFYIVPAQFMSTHADPWPE Mvan_4195|M.vanbaalenii_PYR-1 ERGLDRVRGGFVKQQFVRFLAIFGGVSACFFLFYNVPATWLGMQGDPWPE MAV_2134|M.avium_104 EMWAEHRSKSRVGASVLSVVAVVVIGNALYGAVFAP-------------- Mflv_4146|M.gilvum_PYR-GCK EVWSDRRSSSKIGSSLLSIAAVVVVGHLMYGAVFAP-------------- * :. . ..: . *:. : .: MSMEG_6808|M.smegmatis_MC2_155 DVQKRSYFTSGICGDGTDRPCPHPDLPIPTKHSGYINVDGELVLPEGVEM Mvan_4195|M.vanbaalenii_PYR-1 DVQKRSYFNPGICGEGTDRPCPNPDLPLPTKHSGYVNHDGELVLPEGVEI MAV_2134|M.avium_104 --------------------------HLVTKLGGWVTAG-----PTGELF Mflv_4146|M.gilvum_PYR-GCK --------------------------HLATKLGGYVTEG-----PTEQLW : ** .*::. . * MSMEG_6808|M.smegmatis_MC2_155 PAVVPHE-------- Mvan_4195|M.vanbaalenii_PYR-1 PPVVPIQRPNSDDSQ MAV_2134|M.avium_104 PGVPNQPR------- Mflv_4146|M.gilvum_PYR-GCK PPIENQPR------- * :