For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MSDDGNAHPEFSGLATKAIHAGYRPDPATGAVNTPIYASSTFAQDGVGALRGGYEYARTGNPTRAALEAT LAAVEAGSHGRAFASGMAATDCALRAVLRPGDHVVIPNDAYGGTFRLIDKVFTRWNVEYTPVPLHQLDAV AAAITPRTRLIWVETPTNPLLSIADIAALAQLGHQHSAKVLVDNTFASPALQQPLTLGADIVLHSTTKYI GGHSDVVGGALVTNDAELDDAFGFLQNGAGAVPGPFDAYLTMRGLKTLVLRMQRHTENASAVAQFLAGHP AVSAVLYPGLPGHPGHDVAARQMSGFGGMVSVRMRGGRQAARKLCANTRVFILAESLGGVESLIEHPSAM THASTAGSQLEVPDDLVRLSVGIEDVDDLLADLDRALS
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. avium 104 | MAV_1203 | - | - | 100% (388) | cystathionine gamma-synthase |
M. avium 104 | MAV_4315 | - | 1e-63 | 36.17% (423) | O-acetylhomoserine aminocarboxypropyltransferase |
M. avium 104 | MAV_4773 | metZ | 2e-61 | 35.65% (359) | O-succinylhomoserine sulfhydrylase |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1108 | metB | 0.0 | 85.01% (387) | cystathionine gamma-synthase |
M. gilvum PYR-GCK | Mflv_2046 | - | 1e-176 | 80.53% (375) | cystathionine gamma-synthase |
M. tuberculosis H37Rv | Rv1079 | metB | 0.0 | 85.01% (387) | cystathionine gamma-synthase |
M. leprae Br4923 | MLBr_02394 | metB | 0.0 | 82.73% (388) | cystathionine gamma-synthase |
M. abscessus ATCC 19977 | MAB_1197 | - | 1e-172 | 77.19% (377) | cystathionine gamma-synthase (CGS) |
M. marinum M | MMAR_4388 | metB | 0.0 | 84.75% (387) | cystathionine gamma-synthase MetB (cgs) |
M. smegmatis MC2 155 | MSMEG_5265 | - | 1e-178 | 80.53% (380) | cystathionine gamma-synthase |
M. thermoresistible (build 8) | TH_2171 | - | 0.0 | 82.68% (381) | putative cystathionine gamma-synthase |
M. ulcerans Agy99 | MUL_0201 | metB | 0.0 | 84.50% (387) | cystathionine gamma-synthase |
M. vanbaalenii PYR-1 | Mvan_4670 | - | 1e-178 | 79.43% (389) | cystathionine gamma-synthase |
CLUSTAL 2.0.9 multiple sequence alignment Mb1108|M.bovis_AF2122/97 MSEDRT--GHQGISGPATRAIHAGYRPDPATGAVNVPIYASSTFAQDGVG Rv1079|M.tuberculosis_H37Rv MSEDRT--GHQGISGPATRAIHAGYRPDPATGAVNVPIYASSTFAQDGVG MLBr_02394|M.leprae_Br4923 MSEDYR--GHHGITGLATKAIHAGYRPDPATGAVNVPIYASSTFAQDGVG MMAR_4388|M.marinum_M MKDDHK--AQHRFAGLATRAIHSGYRPDPATGAVNAPIYASSTFAQDGVG MUL_0201|M.ulcerans_Agy99 MKDDHK--AQHRFAGLATRAIHSGYRPDPATGAVNAPIYASSTFAQDGVG MAV_1203|M.avium_104 MSDDGN--AHPEFSGLATKAIHAGYRPDPATGAVNTPIYASSTFAQDGVG MSMEG_5265|M.smegmatis_MC2_155 MSE------HRKWHGLATKAIHAGYQPDPATGAVNTPIYASSTFAQDGVG TH_2171|M.thermoresistible__bu MSE------HRRWQGLATKAIHAGYRPDPATGAVNAPIYASSTFAQDGVG Mflv_2046|M.gilvum_PYR-GCK MGEQRSNADRYRAYGPATKAIHAGYRPDPATGVVNPPIYASSTFAQDGVG Mvan_4670|M.vanbaalenii_PYR-1 MSEQRSASDHYRAFGPATRAIHAGYRPDPATGVVNPPIYASSTFAQDGVG MAB_1197|M.abscessus_ATCC_1997 MSEQRSAADASRWQGFSTRAIHGGFHADPQTGAVNVPIYASSTFAQDGVG * : * :*:***.*::.** **.** ************** Mb1108|M.bovis_AF2122/97 GLRGGFEYARTGNPTRAALEASLAAVEEGAFARAFSSGMAATDCALRAML Rv1079|M.tuberculosis_H37Rv GLRGGFEYARTGNPTRAALEASLAAVEEGAFARAFSSGMAATDCALRAML MLBr_02394|M.leprae_Br4923 ELRGGFEYARTGNPMRAALEASLATVEEGVFARAFSSGMAASDCALRVML MMAR_4388|M.marinum_M GLRGGYEYARTGNPTRTALEAALAAVEDAAFGRAFSSGMAAADCALRAML MUL_0201|M.ulcerans_Agy99 GLRGGYEYARTGNPTRTALEAALAAVEDAAFGRAFSSGMAAADCALRAML MAV_1203|M.avium_104 ALRGGYEYARTGNPTRAALEATLAAVEAGSHGRAFASGMAATDCALRAVL MSMEG_5265|M.smegmatis_MC2_155 GLRGGFEYARTGNPTRQSLEAALAAVEEARFGRAFSSGMAATDCALRAVL TH_2171|M.thermoresistible__bu GLRGGFEYGRTGNPTRSALEASLAAVEEAGYGRAFSSGMAATDCALRAVL Mflv_2046|M.gilvum_PYR-GCK GLRGGFEYARTGNPTRSVLESALAAMEGASYGRAFSSGMAATDCVLRAVL Mvan_4670|M.vanbaalenii_PYR-1 GLRGGFEYSRTGNPTRSVLEGALAAMEGASHGRAFSSGMAATDCVLRAVL MAB_1197|M.abscessus_ATCC_1997 QLRGGFEYARTGNPTRAVLEASLAALEDAHFGRAFSSGMAATDCVLRALL ****:**.***** * **.:**::* . ..***:*****:**.**.:* Mb1108|M.bovis_AF2122/97 RPGDHVVIPDDAYGGTFRLIDKVFTRWDVQYTPVRLADLDAVGAAITPRT Rv1079|M.tuberculosis_H37Rv RPGDHVVIPDDAYGGTFRLIDKVFTRWDVQYTPVRLADLDAVGAAITPRT MLBr_02394|M.leprae_Br4923 RPGDHVIIPDDVYGGTFRLIDKVFTQWNVDYTPVPLSDLDAVRAAITSRT MMAR_4388|M.marinum_M RPGDHVVIPDDAYGGTFRLIDKVFTGWNVEYTPVALADLDAVRAAIRPTT MUL_0201|M.ulcerans_Agy99 RPGDHVVIPDDAYGGTFRLIDKVFTGWNVEYTPVALADLDAVRAAIRPTT MAV_1203|M.avium_104 RPGDHVVIPNDAYGGTFRLIDKVFTRWNVEYTPVPLHQLDAVAAAITPRT MSMEG_5265|M.smegmatis_MC2_155 RPGDHVVIPDDAYGGTFRLIDKVFTHWGISHTPAALSDLDSVRSAITPKT TH_2171|M.thermoresistible__bu RPGDHIVIPNDAYGGTFRLIDKVLTNWGIHYTPVDLSDLDALRVAITSRT Mflv_2046|M.gilvum_PYR-GCK RPGDHIVIPDDAYGGTFRLIDKVFSLWGISYTAVALSDLDRVRAAITDRT Mvan_4670|M.vanbaalenii_PYR-1 RPGDHLVIPDDAYGGTFRLIDKVFSLWGISYTAVALGDLDRVRAAVTDRT MAB_1197|M.abscessus_ATCC_1997 RPGDHLIIPNDAYGGTFRLIDKVFSQWGIRHTPVPVADVDAIRAAITPTT *****::**:*.***********:: *.: :*.. : ::* : *: * Mb1108|M.bovis_AF2122/97 RLIWVETPTNPLLSIADITAIAELGTDRSAKVLVDNTFASPALQQPLRLG Rv1079|M.tuberculosis_H37Rv RLIWVETPTNPLLSIADITAIAELGTDRSAKVLVDNTFASPALQQPLRLG MLBr_02394|M.leprae_Br4923 RLIWVETPTNPLLSIADITSIGELGKKHSVKVLVDNTFASPALQQPLMLG MMAR_4388|M.marinum_M RLIWVETPTNPLLSIADIAGIAQLGADSSAKVLVDNTFASPALQQPLSLG MUL_0201|M.ulcerans_Agy99 RLIWVETPTNPLLSIADIAGIAQLGADSSAKVLVDNTFASPALQQPLSLG MAV_1203|M.avium_104 RLIWVETPTNPLLSIADIAALAQLGHQHSAKVLVDNTFASPALQQPLTLG MSMEG_5265|M.smegmatis_MC2_155 RLIWVETPTNPLLNVADIAGIVQIASSTGVKVLVDNTFASPALQQPLLLG TH_2171|M.thermoresistible__bu RLIVVETPTNPLLSIADIAAIAQIAGTSGVKVLVDNTFASPALQQPLLLG Mflv_2046|M.gilvum_PYR-GCK RLVWIETPTNPLLSIADIAAISALGAEKDVKVLVDNTFASPALQQPLALG Mvan_4670|M.vanbaalenii_PYR-1 KLIWIETPTNPLLSIADIAAIAEVGAATGAKVLVDNTFASPALQQPLALG MAB_1197|M.abscessus_ATCC_1997 KLIWLETPTNPLLSIADIAAVAQVAAEHSVKLLVDNTFASPALQQPLNLG :*: :********.:***:.: :. ..*:*************** ** Mb1108|M.bovis_AF2122/97 ADVVLHSTTKYIGGHSDVVGGALVTNDEELDEEFAFLQNGAGAVPGPFDA Rv1079|M.tuberculosis_H37Rv ADVVLHSTTKYIGGHSDVVGGALVTNDEELDEEFAFLQNGAGAVPGPFDA MLBr_02394|M.leprae_Br4923 ADVVLHSTTKYIGGHSDVVGGALVTNDEELDQAFGFLQNGAGAVPSPFDA MMAR_4388|M.marinum_M ADVVLHSTTKYIGGHSDVVGGALVTNDEELDQSFAFLQNGAGAVPGPFDA MUL_0201|M.ulcerans_Agy99 ADVVLHSTTKYIGGHSDVVGGALVTNDEELDQSFAFLQNGAGAVPGPFDA MAV_1203|M.avium_104 ADIVLHSTTKYIGGHSDVVGGALVTNDAELDDAFGFLQNGAGAVPGPFDA MSMEG_5265|M.smegmatis_MC2_155 ADIVLHSTTKYIGGHSDVVGGALLTNDEELDAAFAFLQNGAGGVPGPFDA TH_2171|M.thermoresistible__bu ADIVLHSTTKYIGGHSDVVGGALLTNDEELDAAFGFLQNGAGAVPGPFDA Mflv_2046|M.gilvum_PYR-GCK ADIVLHSTTKYIGGHSDVVGGAVLTNDEALDGAFAFLQNGAGAVPGPFDA Mvan_4670|M.vanbaalenii_PYR-1 ADIVLHSTTKYIGGHSDVVGGALLTNDEALDDAFAFLQNGAGAVPGPFDA MAB_1197|M.abscessus_ATCC_1997 ADIALHSTTKYIGGHSDVVGGALLTNDEELDTAFAFLQNGAGAVPGPFDG **:.******************::*** ** *.*******.**.***. Mb1108|M.bovis_AF2122/97 YLTMRGLKTLVLRMQRHSENACAVAEFLADHPSVSSVLYPGLPSHPGHEI Rv1079|M.tuberculosis_H37Rv YLTMRGLKTLVLRMQRHSENACAVAEFLADHPSVSSVLYPGLPSHPGHEI MLBr_02394|M.leprae_Br4923 YLTMRGLKTLVLRMQRHNENAITVAEFLAGHPSVSAVLYPGLPSHPGHEV MMAR_4388|M.marinum_M YLTMRGLKTLVLRMQRHSENAAAVAEFLAEHPAISTVLYPGLPSHPGHAV MUL_0201|M.ulcerans_Agy99 YLTMRGLKTLVLRMQRHSENAAAVAEFLAEHPAISTVLYPGLPSHPGHAV MAV_1203|M.avium_104 YLTMRGLKTLVLRMQRHTENASAVAQFLAGHPAVSAVLYPGLPGHPGHDV MSMEG_5265|M.smegmatis_MC2_155 YLTMRGLKTLVLRMRQHSENAALIAEFLDGHPAVQTVLYPGLPSHPNHDV TH_2171|M.thermoresistible__bu YLTMRGLKTLDLRMQKHCANAALVAEFLDGHPAIETVLYPGLAEHPGHDI Mflv_2046|M.gilvum_PYR-GCK YLTIRGLKTLPLRMQRHSENATAVAEFLDGHPAVDTVLYPGLPSHPGHEV Mvan_4670|M.vanbaalenii_PYR-1 YLTIRGLKTLPLRMQRHSENAAAIAEFLDGHPAVTTVLYPGLPSHPNHDV MAB_1197|M.abscessus_ATCC_1997 YLTYRGIKTLALRMQRHSENAQAVAEYLAGHSAVAQTIYPGLESHPGHAV *** **:*** ***::* ** :*::* *.:: .:**** **.* : Mb1108|M.bovis_AF2122/97 AARQMRGFGGMVSVRMRAGRRAAQDLCAKTRVFILAESLGGVESLIEHPS Rv1079|M.tuberculosis_H37Rv AARQMRGFGGMVSVRMRAGRRAAQDLCAKTRVFILAESLGGVESLIEHPS MLBr_02394|M.leprae_Br4923 AARQMRGFGGMVSLRMRAGRLAAQDLCARTKVFTLAESLGGVESLIEQPS MMAR_4388|M.marinum_M AARQMRGFGGMVSVRMRAGRTAAEQLCAKTNIFILAESLGGVESLIEHPS MUL_0201|M.ulcerans_Agy99 AARQMRGFGGMVSVRMRAGRTAAEQLCAKTNIFILAESLGSVESLIEHPS MAV_1203|M.avium_104 AARQMSGFGGMVSVRMRGGRQAARKLCANTRVFILAESLGGVESLIEHPS MSMEG_5265|M.smegmatis_MC2_155 AARQMTGFGGMVSVRLRGGPQAARDLCSRTEIFILAESLGGVESLIEYPG TH_2171|M.thermoresistible__bu AARQMSGFGGMVSVRMRGGAEAARKFCARTELFILAESLGGVESLIEHPG Mflv_2046|M.gilvum_PYR-GCK AARQMSGFGGMISVRLAGGPQAARDFCARTEIFILAESLGGVESLIEYPG Mvan_4670|M.vanbaalenii_PYR-1 AARQMSGFGGMVSVRLRGGPQAARDFCARTEIFILAESLGGVESLIEYPG MAB_1197|M.abscessus_ATCC_1997 AARQMRGFGGMVSVRLAGGRQAALDLCSRTELFILAESLGGVESLIEHPG ***** *****:*:*: .* ** .:*:.*.:* ******.****** *. Mb1108|M.bovis_AF2122/97 AMTHASTAGSQLEVPDDLVRLSVGIEDIADLLGDLEQALG--- Rv1079|M.tuberculosis_H37Rv AMTHASTAGSQLEVPDDLVRLSVGIEDIADLLGDLEQALG--- MLBr_02394|M.leprae_Br4923 AMTHASTTGSQLEVPDDLVRLSVGIEDVGDLLCDLKQALN--- MMAR_4388|M.marinum_M AMTHASTAGSQLEVPDDLVRLSVGIEDVADLLDDLKQALG--- MUL_0201|M.ulcerans_Agy99 AMTHASTAGSQLEVPDDLVRLSVGIEDVADLLDDLKQALG--- MAV_1203|M.avium_104 AMTHASTAGSQLEVPDDLVRLSVGIEDVDDLLADLDRALS--- MSMEG_5265|M.smegmatis_MC2_155 AMTHASTAGSQLEVPDDLVRLSVGIEHSADLLADLEQALG--- TH_2171|M.thermoresistible__bu AMTHASTAGSQLEVPDDLVRLSVGIEDSADLLADLDQALADI- Mflv_2046|M.gilvum_PYR-GCK AMTHASTAGSQLEVPDDLVRLSVGIEDVADLVGDVEQALG--- Mvan_4670|M.vanbaalenii_PYR-1 AMTHASTAGSQLEVPDDLVRLSVGIEDVADLLGDVEQALGAPG MAB_1197|M.abscessus_ATCC_1997 AMTHASTAGSLLEVPDDLVRLSVGIEEVGDLIGDLEQALR--- *******:** ***************. **: *:.:**