For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
PARRHLYFAYGSNLCARQMAQRCPDAADPRPAVLADHDWLINQRGVATVEPLAGNQVHGVVWRISDGDLA TLDSAEGVPVRYRRDRLTVHTDDGPAPAWVYIDHRVTPGPPRPGYLPKIVDGATQHGLPQRWIDFLRRWD PAGWPSPRATSPSNRIGPQSLSALLRVTGVTESSQLRSGFGFLAIHGGGLEEMTDVIAERAAAAAGASVY VVRHPAAYPHHLPSARFDPAESPRLAEFLDHVDVAVSLHGYGRDGRSTQLLAGGRNRALADHLARHVRLA GYRVITDLEDIPAELRGLHPANPVNRVRDGGVQLELSARVRGLSPRSPLPGDDGLSPVTGALIQGLADAA RCWSMSDH*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. avium 104 | MAV_1043 | - | - | 100% (359) | hypothetical protein MAV_1043 |
M. avium 104 | MAV_4280 | - | 1e-09 | 29.94% (167) | L308_f3_97 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0947c | - | 1e-162 | 76.84% (354) | hypothetical protein Mb0947c |
M. gilvum PYR-GCK | Mflv_1820 | - | 1e-160 | 76.42% (352) | hypothetical protein Mflv_1820 |
M. tuberculosis H37Rv | Rv0923c | - | 1e-162 | 76.84% (354) | hypothetical protein Rv0923c |
M. leprae Br4923 | MLBr_00711 | - | 6e-07 | 27.49% (171) | hypothetical protein MLBr_00711 |
M. abscessus ATCC 19977 | MAB_3657 | - | 3e-09 | 29.94% (167) | hypothetical protein MAB_3657 |
M. marinum M | MMAR_4586 | - | 1e-165 | 79.14% (350) | hypothetical protein MMAR_4586 |
M. smegmatis MC2 155 | MSMEG_5591 | - | 1e-150 | 74.22% (353) | hypothetical protein MSMEG_5591 |
M. thermoresistible (build 8) | TH_0597 | - | 2e-68 | 43.34% (353) | CONSERVED HYPOTHETICAL PROTEIN |
M. ulcerans Agy99 | MUL_4447 | - | 6e-83 | 71.64% (201) | hypothetical protein MUL_4447 |
M. vanbaalenii PYR-1 | Mvan_4925 | - | 1e-157 | 74.72% (352) | hypothetical protein Mvan_4925 |
CLUSTAL 2.0.9 multiple sequence alignment Mb0947c|M.bovis_AF2122/97 ----------MPDRRHPYFAYGSNLCAHQMASRCPDAGAPRPAVLSDHNW Rv0923c|M.tuberculosis_H37Rv ----------MPDRRHPYFAYGSNLCAHQMASRCPDAGAPRPAVLSDHNW MAV_1043|M.avium_104 ----------MPARRHLYFAYGSNLCARQMAQRCPDAADPRPAVLADHDW Mflv_1820|M.gilvum_PYR-GCK MSPQVTDGGASAGDRHHYFAYGSNLCIRQMAQRCPDAGDPRPATLADHDW Mvan_4925|M.vanbaalenii_PYR-1 -----------MGVRHFYFAYGSNLCVQQMARRCPDATDPRRATLADHDW TH_0597|M.thermoresistible__bu -----------MGVRHAYFAYGSNLCVQQMARRCPGACDPRPAVLPDHDW MSMEG_5591|M.smegmatis_MC2_155 -------------MRHAYFAYGSNLCVTQMAQRCPDAVDPIPARLDDHDW MMAR_4586|M.marinum_M ----------MLTGRHLYFAYGSNLCVRQMSVRCPDASDPRPAVLSDHDW MUL_4447|M.ulcerans_Agy99 ----------MLTGRHLYFAYGSNLCVRQMSVRCPDASDPRPAVLSDHDW MLBr_00711|M.leprae_Br4923 --------------MPLYAAYGPNMHPEQMLKRAPHSPMAGTGWLPGWRL MAB_3657|M.abscessus_ATCC_1997 --------------MPLYAAYGSNMHPEQMLQRAPHSPMAGTGWLHGWRL * ***.*: ** *.* : . . * . Mb0947c|M.bovis_AF2122/97 LIN------QRGVATVEPFAGNKVHGVLWQLSERDLVRLDSAEG------ Rv0923c|M.tuberculosis_H37Rv LIN------QRGVATVEPFAGNKVHGVLWQLSERDLVRLDSAEG------ MAV_1043|M.avium_104 LIN------QRGVATVEPLAGNQVHGVVWRISDGDLATLDSAEG------ Mflv_1820|M.gilvum_PYR-GCK LIN------ERGVATIEPFAGSEVHGVVWQVSDRDLATLDSAEG------ Mvan_4925|M.vanbaalenii_PYR-1 LIN------ERGVATIEPFAGSEVHGVVWRVSDRDLATLDSAEG------ TH_0597|M.thermoresistible__bu LIN------QRGVATVEPSTGARVHGVLWHVTDTDLATLDSAEG------ MSMEG_5591|M.smegmatis_MC2_155 LIN------QRGVATVEPFTGGQVHGVLWQVSDHDLNALDSAEG------ MMAR_4586|M.marinum_M LIN------ERGVATVEPLTGGQVHGVLWQISDRDLATLDSAEG------ MUL_4447|M.ulcerans_Agy99 LIN------ERGVATVEPLTGGQVHGVLWQISDRDLATLDSAEG------ MLBr_00711|M.leprae_Br4923 TFGGEDIGWEGALATVVEDPDSRVFVVLYDMTPADEMNLDRWEGSEFGVH MAB_3657|M.abscessus_ATCC_1997 TFGGEDIGWEGALATVVQDPHSKVFVVLYDMTSADEKNLDRWEGSELGIH :. : .:**: . .*. *:: :: * ** ** Mb0947c|M.bovis_AF2122/97 VPVRYRRERLTVHTDDTALPAWVYIDHRVMPGRPRPGYLPRVIDGARHHG Rv0923c|M.tuberculosis_H37Rv VPVRYRRERLTVHTDDTALPAWVYIDHRVMPGRPRPGYLPRVIDGARHHG MAV_1043|M.avium_104 VPVRYRRDRLTVHTDDGPAPAWVYIDHRVTPGPPRPGYLPKIVDGATQHG Mflv_1820|M.gilvum_PYR-GCK VPVRYRRDEMTVLTDTGPSPAWVYIDHRVEPGPPRPGYLERILDGAHHHG Mvan_4925|M.vanbaalenii_PYR-1 VPVRYRRDELTVLTDNGPSEAWVYIDHRVEPGPPRPGYLERILDGARHHD TH_0597|M.thermoresistible__bu VPVRYRRDRLTVQLGDGGAEAWVYIDHRVEPGPPRPGYLERIIDGALHHG MSMEG_5591|M.smegmatis_MC2_155 VPVRYRRDRLIVHTAGGPAAAWVYIDHRVDPGPPRPGYLERILDGAMHHG MMAR_4586|M.marinum_M VPVRYRRDLLCVRTHDGPTTAWVYIDHRITPGPPRPGYLNRVIDGALHHG MUL_4447|M.ulcerans_Agy99 LPVRYRRDLLCVRTHDGPTTAWVYIDHRITPGPPRPEYLNRVIDGALHHG MLBr_00711|M.leprae_Br4923 KKIRCRVERESSDTTIDPVLAWLYVLDSWEGGLPSARYLGVMADAAEIAG MAB_3657|M.abscessus_ATCC_1997 TKIRCRIDRESSDTTTDPVLAWLYVVNAYEGGLPSARYLGVMADAAEIAG :* * : **:*: . * * . ** : *.* . Mb0947c|M.bovis_AF2122/97 LPQRWIDYLHRWDPARWPLPVLPSSRSGPAPQSLSELLSQPGVIETSQLR Rv0923c|M.tuberculosis_H37Rv LPQRWIDYLHRWDPARWPLPVLPSSRSGPAPQSLSELLSQPGVIETSQLR MAV_1043|M.avium_104 LPQRWIDFLRRWDPAGWPSPRATSPSNRIGPQSLSALLRVTGVTESSQLR Mflv_1820|M.gilvum_PYR-GCK LPRRWIQFLERWDPANWPQR--REDPQSSGPQTLSDLLADPAVTEESVLR Mvan_4925|M.vanbaalenii_PYR-1 LPRRWIQFLERWDPTRWPQR--PDRADSVAPQSLSELVSDPAIAEDVTLQ TH_0597|M.thermoresistible__bu LPQRWIGFLQRWDPA----------------------------------- MSMEG_5591|M.smegmatis_MC2_155 LPQRWIEFLRRWDPMHWPQQ--TRSATSPAPQSLAELLADPAVRETSTLR MMAR_4586|M.marinum_M LPQRWIDFLHRWDPVHWLQP-VSAAASGAGPQSLSALLSEPGLSEISQLR MUL_4447|M.ulcerans_Agy99 LPQRWIDFLHRWDPVHWLQP-VSAAASGAGPQSLSALLSEPGLSEISQLR MLBr_00711|M.leprae_Br4923 APNDYVHNLR------------TRPARNIGPGTTA--------------- MAB_3657|M.abscessus_ATCC_1997 APEDYVHGLR------------TRASRNIGPGTS---------------- *. :: *. Mb0947c|M.bovis_AF2122/97 SRFGFLAIHGGGLEQVTDLIAERSAEAAGASVYLLRHPDNYPHHLPSARF Rv0923c|M.tuberculosis_H37Rv SRFGFLAIHGGGLEQVTDLIAERSAEAAGASVYLLRHPDNYPHHLPSARF MAV_1043|M.avium_104 SGFGFLAIHGGGLEEMTDVIAERAAAAAGASVYVVRHPAAYPHHLPSARF Mflv_1820|M.gilvum_PYR-GCK SRFGFLAIHGGGLERMTDVVAERAADAAGASVYVVRHPDEYPHHLSSARY Mvan_4925|M.vanbaalenii_PYR-1 SRFGFLAIHGGGLEQMTDVIAERAADAAGASLYVVRHPDHYPHHLPSARY TH_0597|M.thermoresistible__bu ---------------------------------------HYPHHLPSARY MSMEG_5591|M.smegmatis_MC2_155 SRFGFMAIHGGGLEQMTDVIAERAAAASDASVYVVRHPDRYPHHLPSARY MMAR_4586|M.marinum_M SRFGFLAIHGGSLEKMTDVIAERAADAAGASVYVLRHPDRYPHHLPSSRF MUL_4447|M.ulcerans_Agy99 SRFGFLAIHGGG---------ARVDYLEHMTAYVKQHHPTVPILIAG--- MLBr_00711|M.leprae_Br4923 -------------------------------------------------- MAB_3657|M.abscessus_ATCC_1997 -------------------------------------------------- Mb0947c|M.bovis_AF2122/97 DPAESARLAEFLDHVDVAVSLHGYDRIGRSTQLLAGGRNRALAAHLARHI Rv0923c|M.tuberculosis_H37Rv DPAESARLAEFLDHVDVAVSLHGYDRIGRSTQLLAGGRNRALAAHLARHI MAV_1043|M.avium_104 DPAESPRLAEFLDHVDVAVSLHGYGRDGRSTQLLAGGRNRALADHLARHV Mflv_1820|M.gilvum_PYR-GCK DPAHSPRLAEFLDHVDVAVSLHGYGRIGRSTHLLAGGRNRALAEHVANHL Mvan_4925|M.vanbaalenii_PYR-1 DPAQSPVLAEFLDHVDVAISLHGYGRLGRSTHLLAGGRNRGLAEHVARHV TH_0597|M.thermoresistible__bu DPADSPRLAEFLDHVDVGVSLHGYGRIGRSTELLVGGRNRSLAVHLARNV MSMEG_5591|M.smegmatis_MC2_155 LAAESQRLSEFLEHVDVVVSLHGYGRMGRGTQLLAGGRNRTLAEHVARHV MMAR_4586|M.marinum_M DPGESPQLAEFLDHVDVAVSLHGYGRIGRGTQLLAGGRNRELADHLARHL MUL_4447|M.ulcerans_Agy99 ---NGNRVMTLAAQQANIVGLTGSNVHG-ADDPLAERVDFVRRAAGDRFD MLBr_00711|M.leprae_Br4923 -------------------------------------------------- MAB_3657|M.abscessus_ATCC_1997 -------------------------------------------------- Mb0947c|M.bovis_AF2122/97 QLPGYRVVTDLAAIPEELRGLHPDNPVNRVRDGGTQLELSIRVRGLGPR- Rv0923c|M.tuberculosis_H37Rv QLPGYRVVTDLAAIPEELRGLHPDNPVNRVRDGGTQLELSIRVRGLGPR- MAV_1043|M.avium_104 RLAGYRVITDLEDIPAELRGLHPANPVNRVRDGGVQLELSARVRGLSPR- Mflv_1820|M.gilvum_PYR-GCK EIPGYRVLTDLTAIPPELRGLHPDNPVNRTRSGGTQLELSARVRGTSPR- Mvan_4925|M.vanbaalenii_PYR-1 VVPGYRVVTDLESIPKELRGLHPDNPVNRVRGGGAQLELSARVRGISPR- TH_0597|M.thermoresistible__bu RIPGYRLVTDLAAIPRELRGQHPDNPVNRPARGGAQLELSARVRGISPR- MSMEG_5591|M.smegmatis_MC2_155 EIPGYTVVTDLDAIPRELRGQHADNPANRVA--GVQLELPSRVRGISPR- MMAR_4586|M.marinum_M ELPGYQVVTDLDAIPAELRGLHPDNPVNRVRGGGAQLELSIRVRGLSPR- MUL_4447|M.ulcerans_Agy99 ALELNLAITALPNEGETAPDLAMTRRYAPELSDEQILALHS-VLGGSPRE MLBr_00711|M.leprae_Br4923 -------------------------------------------------- MAB_3657|M.abscessus_ATCC_1997 -------------------------------------------------- Mb0947c|M.bovis_AF2122/97 --STLPGVGGMSPVTATLVQG--LVTAARSW------- Rv0923c|M.tuberculosis_H37Rv --STLPGVGGMSPVTATLVQG--LVTAARSW------- MAV_1043|M.avium_104 --SPLPGDDGLSPVTGALIQG--LADAARCWSMSDH-- Mflv_1820|M.gilvum_PYR-GCK --SAVPSDDGLCPATSLLVQG--LAAAARSWHLPPR-- Mvan_4925|M.vanbaalenii_PYR-1 --SGLPGDDGLSPATSALVQG--LVRAARTWRLPSTQG TH_0597|M.thermoresistible__bu --SPLPGDDGLTAPAWELIEG--LVAAARSWPLPA--- MSMEG_5591|M.smegmatis_MC2_155 --SPLPGADGLSPVTSALIDG--LAAAARSWTAIRR-- MMAR_4586|M.marinum_M --SPLPGDDGLSPVTASLVQG--LVAAARAW------- MUL_4447|M.ulcerans_Agy99 IADTLAGYRDIYGVTSFTVQDNHLDNFAKVIAELR--- MLBr_00711|M.leprae_Br4923 -------------------------------------- MAB_3657|M.abscessus_ATCC_1997 --------------------------------------