For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
CVLGLGLVGGSIMRAATAAGREVFGYNRSIEGAQAATADGFDADTDLTATLSRAADSDALIVLAVPMPAL PSMLAHVKETAPQCPLTDVTSVKKAVLDEVVAAGLRDRFVGGHPMAGTAHSGWTAGHAGLFTGAPWVVSV DDHVDPVVWAMVMTLALDCGAVVVPARSDEHDAAAAAISHLPHLLAEALAVVAGDVPLAFALAAGSFRDG TRVAATAPDLVRAMCEGNSDQLVPTADHVIELLRRARDSLAHHKSVADLIEAGHAARTRYDSFPRTDIFH VVIGAENWRQELAAAGRAGGVIRSALPTLDSPR*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. avium 104 | MAV_0321 | - | - | 100% (314) | prephenate dehydrogenase |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb3780 | tyrA | 1e-138 | 79.40% (301) | prephenate dehydrogenase |
| M. gilvum PYR-GCK | Mflv_1212 | - | 1e-129 | 74.04% (312) | prephenate dehydrogenase |
| M. tuberculosis H37Rv | Rv3754 | tyrA | 1e-138 | 79.40% (301) | prephenate dehydrogenase |
| M. leprae Br4923 | MLBr_02472 | - | 1e-140 | 77.64% (313) | prephenate dehydrogenase |
| M. abscessus ATCC 19977 | MAB_0266c | - | 1e-105 | 64.80% (304) | prephenate dehydrogenase |
| M. marinum M | MMAR_5297 | tyrA | 1e-142 | 79.23% (313) | prephenate dehydrogenase TyrA |
| M. smegmatis MC2 155 | MSMEG_6330 | - | 1e-126 | 73.40% (312) | prephenate dehydrogenase |
| M. thermoresistible (build 8) | TH_1655 | tyrA | 1e-132 | 75.00% (312) | PREPHENATE DEHYDROGENASE TYRA (PDH) (HYDROXYPHENYLPYRUVATE |
| M. ulcerans Agy99 | MUL_4372 | tyrA | 1e-141 | 78.91% (313) | prephenate dehydrogenase |
| M. vanbaalenii PYR-1 | Mvan_5596 | - | 1e-130 | 75.00% (312) | prephenate dehydrogenase |
CLUSTAL 2.0.9 multiple sequence alignment
Mb3780|M.bovis_AF2122/97 ---------------------------MRAAAAAGREVFGYNRSVEGAHG
Rv3754|M.tuberculosis_H37Rv ---------------------------MRAAAAAGREVFGYNRSVEGAHG
MMAR_5297|M.marinum_M ---------MQTTPVCVLGLGLIGGSIMRATAAADRVVFGYNRSVEGANG
MUL_4372|M.ulcerans_Agy99 --------------MCVLGLGLIGGSIMRATAAADRVVFGYNRSVEGANG
MLBr_02472|M.leprae_Br4923 MSILDGGWDCVGRPVCVLGLGLIGGSIMRATAEAGREVFGYNRSVKGAQS
MAV_0321|M.avium_104 --------------MCVLGLGLVGGSIMRAATAAGREVFGYNRSIEGAQA
Mflv_1212|M.gilvum_PYR-GCK --------------MCVIGLGLIGGSLMRAAKAAGREVFGYNRSLDGVEA
Mvan_5596|M.vanbaalenii_PYR-1 ---MCQPRHVTKTPVCVIGLGLIGGSLMRAAKAAGREVFGYNRSVEGVDA
MSMEG_6330|M.smegmatis_MC2_155 --------------MCVLGLGLIGGSVMRAAAAAGREVFGYNRSVEAVQA
TH_1655|M.thermoresistible__bu ---------VTKVPICVLGLGLIGGSIMRAARAAGREVFGYNRSIDGVTA
MAB_0266c|M.abscessus_ATCC_199 --MNAAEHDHQRPPICVLGLGLIGGSLMRAATAAGRNVWGYNRSAEGVDA
***: *.* *:***** ... .
Mb3780|M.bovis_AF2122/97 ARSDGFDAITDLNQTLTRAAATEALIVLAVPMPALPGMLAHIRKSAPGCP
Rv3754|M.tuberculosis_H37Rv ARSDGFDAITDLNQTLTRAAATEALIVLAVPMPALPGMLAHIRKSAPGCP
MMAR_5297|M.marinum_M AQSDGFEATTDLAETLARAADTNALIVLAVPMPALPSMLTHIRELAPSCP
MUL_4372|M.ulcerans_Agy99 AQSDGFEATTDLAETLARAADTTALIVLAVPMPALPSMLTHIRELAPNCP
MLBr_02472|M.leprae_Br4923 ARSDGFDATTKLADALVRAADTHALIVLAVPMPALPAMLAHIRELAPNCP
MAV_0321|M.avium_104 ATADGFDADTDLTATLSRAADSDALIVLAVPMPALPSMLAHVKETAPQCP
Mflv_1212|M.gilvum_PYR-GCK ARADGFDATADLDEALSRASASGALIVLAVPMPALPLMLRHVRAVAPACA
Mvan_5596|M.vanbaalenii_PYR-1 ARLAGFDASTNLDETLARAAAVDALIVLAVPMPALPLMLRHVRESAADCA
MSMEG_6330|M.smegmatis_MC2_155 ATFDGFDATANLDKALARAAADDALIVLAVPMPALGLMLGHIRAAAANCA
TH_1655|M.thermoresistible__bu ARAEGFDATEHLDEALARAAEQRALIVLAVPMFAVPMLLERIAQEAADCP
MAB_0266c|M.abscessus_ATCC_199 ARTAGYDATADLDLALRRARNAQALIVLAVPVPALSPLLNRIAELAPECP
* *::* .* :* ** ********: *: :* :: *. *.
Mb3780|M.bovis_AF2122/97 LTDVTSVKCAVLDEVTAAGLQARYVGGHPMTGTAHSGWTAGHGGLFNRAP
Rv3754|M.tuberculosis_H37Rv LTDVTSVKCAVLDEVTAAGLQARYVGGHPMTGTAHSGWTAGHGGLFNRAP
MMAR_5297|M.marinum_M LTDVTSVKTAVLEEVTEAGLRERFVGGHPMTGTAHSGWGAGHGALFTRAP
MUL_4372|M.ulcerans_Agy99 LTDVTSVKTAVLEEVTEAGLRERFVGGHPMTGTAHSGWGAGHGALFTRAP
MLBr_02472|M.leprae_Br4923 LTDVTSVKTAVLDAVVSVGLQARFVGGHPMTGTAQSGWGAGHGGLFNRTS
MAV_0321|M.avium_104 LTDVTSVKKAVLDEVVAAGLRDRFVGGHPMAGTAHSGWTAGHAGLFTGAP
Mflv_1212|M.gilvum_PYR-GCK LTDVTSVKGAVLDAVAEAGLLDRFVGGHPMTGTAYSGWSAGDERLFVDTP
Mvan_5596|M.vanbaalenii_PYR-1 LTDVTSVKGAVHEEVAKAGLLARFVGGHPMTGTAHSGWAAGDARLFVGAP
MSMEG_6330|M.smegmatis_MC2_155 LTDVISVKGAVLREVEMYGLLERFVGGHPMAGTAHSGWAAGSVDLFVGAP
TH_1655|M.thermoresistible__bu LTDVVSVKGAVLEEVRAHGLLARFVGGHPMTGTAHSGWSAGDADLFAGTP
MAB_0266c|M.abscessus_ATCC_199 LTDVTSVKSAVLQTVSEHGLAQRFVGGHPMAGTTESGWSAGDAELFRDAT
**** *** ** * ** *:******:**: *** ** ** :.
Mb3780|M.bovis_AF2122/97 WVVSVDDHVDPTVWSMVMTLALDCGAMVVPAKSDEHDAAAAAVSHLPHLL
Rv3754|M.tuberculosis_H37Rv WVVSVDDHVDPTVWSMVMTLALDCGAMVVPAKSDEHDAAAAAVSHLPHLL
MMAR_5297|M.marinum_M WVVSVDDHVDPVVWSMVMQLALDCGAVVVPAKSDEHDAAAAAISHLPHLL
MUL_4372|M.ulcerans_Agy99 WVVSVDDHVDPVVWSMVMQLALDCGAVVVPAKSDEHDAAAAAISHLPHLL
MLBr_02472|M.leprae_Br4923 WVLSVDDHVDPAVWSMVMTLALDCGALVLPAKSDEHDAAAAAISHMPHLL
MAV_0321|M.avium_104 WVVSVDDHVDPVVWAMVMTLALDCGAVVVPARSDEHDAAAAAISHLPHLL
Mflv_1212|M.gilvum_PYR-GCK WVLSVDDHVDPDVWARVMRLALDCGAFVVPARSDEHDTAAATISHLPHLL
Mvan_5596|M.vanbaalenii_PYR-1 WVLSVDDHVDPGVWATVMHLALDCGSFVVPARSDEHDAAAATISHLPHLL
MSMEG_6330|M.smegmatis_MC2_155 WVVSVDDHVDAGVWTQVAQLALDCHAVVVPARSDEHDAAAAAISHLPHLF
TH_1655|M.thermoresistible__bu WVVSVDDHVDPAIWAMVMELALDCRAVVVPARSDEHDAAAASVSHLPHLL
MAB_0266c|M.abscessus_ATCC_199 WVVSVDDDVDPHVFAQVTQLALDCGSVVVPARSDEHDAAAAAISHLPHLL
**:****.**. ::: * ***** :.*:**:*****:***::**:***:
Mb3780|M.bovis_AF2122/97 AEALAVTAAEVPLAFALAAGSFRDATRVAATAPDLVRAMCEANTGQLAPA
Rv3754|M.tuberculosis_H37Rv AEALAVTAAEVPLAFALAAGSFRDATRVAATAPDLVRAMCEANTGQLAPA
MMAR_5297|M.marinum_M AEALAVTAAEVPLAFALAAGSFRDATRVAGTAPDLVRAMCEANTGQLVPA
MUL_4372|M.ulcerans_Agy99 AEALAVTAAEVPLAFALAAGSFRDATRVAGTAPDLVRAMCEANTGQLVPA
MLBr_02472|M.leprae_Br4923 AEALAVAAAEVPLAFAVAAGSFRDATRVAGTAPDLVRAMCEGNSGQLLSS
MAV_0321|M.avium_104 AEALAVVAGDVPLAFALAAGSFRDGTRVAATAPDLVRAMCEGNSDQLVPT
Mflv_1212|M.gilvum_PYR-GCK AEALAATAGEVPLAFALAAGSFRDGTRVAGTAPDLVRAMCEANAAQVVPV
Mvan_5596|M.vanbaalenii_PYR-1 AEALAATAGEVPLAFALAAGSFRDGTRVAATAPDLVRAMCEANATHLLPV
MSMEG_6330|M.smegmatis_MC2_155 AETMAEIAGEVPLAYALAAGSFRDGTRVAGSAPDLVRAMCEANAAQLLPA
TH_1655|M.thermoresistible__bu AEALAITAGEVPLAFSLAAGSFRDGTRVAATAPDLVRAMCENNADQLLPA
MAB_0266c|M.abscessus_ATCC_199 AEALAVTADGVPLAYSLAAGSFRDGTRVAATDPSLVRAMCESNPHGVLPA
**::* * ****:::*******.****.: *.******* *. : .
Mb3780|M.bovis_AF2122/97 ADRIIDLLSRARDSLQSHGSIADLADAGHAARTRYDSFPRSDIVTVVIGA
Rv3754|M.tuberculosis_H37Rv ADRIIDLLSRARDSLQSHGSIADLADAGHAARTRYDSFPRSDIVTVVIGA
MMAR_5297|M.marinum_M ADRIIELLNRARDSLACNGSVADLVDAGNAARTRYESFPRSDISTVTIGE
MUL_4372|M.ulcerans_Agy99 ADRIIELLNRARDSLACNGSVADLVDAGNAARTRYESFPPSDISTVTIGE
MLBr_02472|M.leprae_Br4923 VDRVIELLCRARDSLACNNSVAELVEAGHAARARYDSFPRSDIVTVIIGA
MAV_0321|M.avium_104 ADHVIELLRRARDSLAHHKSVADLIEAGHAARTRYDSFPRTDIFHVVIGA
Mflv_1212|M.gilvum_PYR-GCK LDQALRLLTDARNRLAQHQPVADLVETGHAARIRYDSFSRPQIVAVTIGS
Mvan_5596|M.vanbaalenii_PYR-1 LDHALRLLIDARNQLAQHQPVSELVEGGHAARIRYDSFSRPQIVTTVIGA
MSMEG_6330|M.smegmatis_MC2_155 LDRGIELLTRARAALADTGSVAELVESGHAARMRYDSFARPDIIATVVGD
TH_1655|M.thermoresistible__bu LDRTLELLTAAREALAHNGSVAELVEAGHAARMRYDSFGRTDIMAVVIGE
MAB_0266c|M.abscessus_ATCC_199 LEEAMALLAATWNTLNAENSVELLVEAGHAARQRYEAHERFDISGISRHD
:. : ** : * .: * : *:*** **::. :*
Mb3780|M.bovis_AF2122/97 DKWREQLAAAGRAGGVITSALPSLDSPQ
Rv3754|M.tuberculosis_H37Rv DKWREQLAAAGRAGGVITSALPSLDSPQ
MMAR_5297|M.marinum_M PRWRERLAAAGRAGGVIKSALPSLDSPG
MUL_4372|M.ulcerans_Agy99 PRWRERLAAAGRAGGVIKSALPSLDSPG
MLBr_02472|M.leprae_Br4923 ENWREDLAAAGRAGGVIRSALPSLGSP-
MAV_0321|M.avium_104 ENWRQELAAAGRAGGVIRSALPTLDSPR
Mflv_1212|M.gilvum_PYR-GCK EGWRDELAAAGRAGGVIRSALPVRGSRG
Mvan_5596|M.vanbaalenii_PYR-1 EEWRDELAAAGRAGGVIRSALPVRDSRG
MSMEG_6330|M.smegmatis_MC2_155 ENWRDELAAAGRAGGVIRSALPVLGSRG
TH_1655|M.thermoresistible__bu EGWREELAAAGRAGGVIRSALPVRDS--
MAB_0266c|M.abscessus_ATCC_199 TDWREQLADAGRAGGVLRRVP-------
**: ** *******: .