For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
FDWFNLGFIYYPVSGIMWVWYKLFAYLLGPKNFFAWALSVMFLVFTLRAILYKPFVRQIRTTRQMQELQP QIKALQKKYKNDRQRMALEMQKLQREHGFNPILGCLPMLAQIPVFLGLFHVLRSFNRTTGGFGQVHMTVE ANRATGNYFFSANDVANFLDANLFGAPLGATMIQTTGLDAFTEFNRLAVAGVSIPLMIIAGVATYFNSRA SIARQSPEAQANPQTQIMNRLALYVFPLGVVVGGPFLPIAIILYWVSNNIWTFGQQHYVFNRIAKEEEEK KQADLERRAANAPKPGAKPTRGKSQPAEQADDSDASPEVVESTGTDEDSGGPASPNSTNGSGTTSRTPKP GARPDRRRKR*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. abscessus ATCC 19977 | MAB_4953c | oxaA | - | 100% (361) | putative inner membrane protein translocase component YidC |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb3952c | - | 1e-152 | 72.75% (367) | putative inner membrane protein translocase component YidC |
| M. gilvum PYR-GCK | Mflv_0831 | - | 1e-152 | 70.86% (374) | putative inner membrane protein translocase component YidC |
| M. tuberculosis H37Rv | Rv3921c | - | 1e-152 | 72.75% (367) | putative inner membrane protein translocase component YidC |
| M. leprae Br4923 | MLBr_02710 | - | 1e-139 | 66.05% (377) | putative inner membrane protein translocase component YidC |
| M. marinum M | MMAR_5485 | - | 1e-154 | 72.97% (370) | transmembrane protein |
| M. avium 104 | MAV_5310 | - | 1e-153 | 73.33% (360) | putative inner membrane protein translocase component YidC |
| M. smegmatis MC2 155 | MSMEG_6942 | - | 1e-151 | 71.39% (367) | putative inner membrane protein translocase component YidC |
| M. thermoresistible (build 8) | TH_0761 | - | 1e-148 | 71.03% (359) | PROBABLE CONSERVED TRANSMEMBRANE PROTEIN |
| M. ulcerans Agy99 | MUL_5074 | - | 1e-154 | 72.43% (370) | putative inner membrane protein translocase component YidC |
| M. vanbaalenii PYR-1 | Mvan_6075 | - | 1e-150 | 71.58% (373) | putative inner membrane protein translocase component YidC |
CLUSTAL 2.0.9 multiple sequence alignment
MMAR_5485|M.marinum_M MSFL-FDFFSLDFVYYPVSWIMWVWYKLFALVLG-------PSNFFAWAL
MUL_5074|M.ulcerans_Agy99 MSFL-FDFFSLEFVYYPVSWIMWVWYKLFALVLG-------PSNFFAWAL
Mb3952c|M.bovis_AF2122/97 MSLL-FDFFSLDFIYYPVSWIMWVWYRLFAFVLG-------PSNFFAWAL
Rv3921c|M.tuberculosis_H37Rv MSLL-FDFFSLDFIYYPVSWIMWVWYRLFAFVLG-------PSNFFAWAL
MLBr_02710|M.leprae_Br4923 MSLLPFDFVSLDIVYYPVSWIMWVWYKLFAAVLG-------PSNFFAWAL
MAV_5310|M.avium_104 ----MFDFFSLDFVYYPVSWIMWVWYKLFAAMLG-------PSNFFAWAL
Mflv_0831|M.gilvum_PYR-GCK ---MSFNWMSLDFIYYPVSAIMWVWYKAFAFLLG-------PTNFFAWAL
Mvan_6075|M.vanbaalenii_PYR-1 ---MSFNWFSLDIIYYPVSAIMWVWYKAFAFLIGLIPGVDGPSNFFAWAL
MSMEG_6942|M.smegmatis_MC2_155 ----MFNFFSLDIIYYPVSAIMWVWYKAFSFLLG-------PTNFFAWAL
TH_0761|M.thermoresistible__bu ----VFNWFSLDIIYYPVSGIMWIWYKVFAFLLG-------PSNFFAWAL
MAB_4953c|M.abscessus_ATCC_199 ----MFDWFNLGFIYYPVSGIMWVWYKLFAYLLG-------PKNFFAWAL
*::..* ::***** ***:**: *: ::* *.*******
MMAR_5485|M.marinum_M SVMFLVFTLRALLYKPFVRQIRTTRQMQELQPQIKALQKKYGKDRQRMAL
MUL_5074|M.ulcerans_Agy99 SVMFLVFTLRALLYKPFVRQIRTTRQMQELQPQIKALQKKYGKDRQRMAL
Mb3952c|M.bovis_AF2122/97 SVMFLVFTLRALLYKPFVRQIRTTRQMQELQPQIKALQKKYGKDRQRMAL
Rv3921c|M.tuberculosis_H37Rv SVMFLVFTLRALLYKPFVRQIRTTRQMQELQPQIKALQKKYGKDRQRMAL
MLBr_02710|M.leprae_Br4923 SVMFLVFTLRALLYKPFVRQIRTTRQMQELQPRIRALQRKYGKDRQRMAL
MAV_5310|M.avium_104 SVMFLVFTLRALLYKPFVRQIRTTRQMQELQPQIKALQKKYGKDRQRMAL
Mflv_0831|M.gilvum_PYR-GCK SVMFLVFTLRAILYKPFVKQIRTTRQMQELQPQIKALQKKYGKDRQRMAL
Mvan_6075|M.vanbaalenii_PYR-1 SVMFLVFTLRAILYKPFVRQIRTTRQMQELQPQIKALQKKYGKDRQRMAL
MSMEG_6942|M.smegmatis_MC2_155 SVMFLVFTLRAILYKPFVKQIRTTRQMQELQPQIKALQKKYGKDRQRMAL
TH_0761|M.thermoresistible__bu SVMFLVFTLRAILYKPFVRQIRTTRQMQELQPQIKALQKKYGKDRQRMAL
MAB_4953c|M.abscessus_ATCC_199 SVMFLVFTLRAILYKPFVRQIRTTRQMQELQPQIKALQKKYKNDRQRMAL
***********:******:*************:*:***:** :*******
MMAR_5485|M.marinum_M EMQKLQREHGFNPILGCLPMLAQIPVFLGLYHVLRSFNRT-TGGFGQPHL
MUL_5074|M.ulcerans_Agy99 EMQKLQREHGFNPILGCLPMLAQIPVFLGLYHVLRSFNRT-TGGFGQPHL
Mb3952c|M.bovis_AF2122/97 EMQKLQREHGFNPILGCLPMLAQIPVFLGLYHVLRSFNRT-TGGFGQPHL
Rv3921c|M.tuberculosis_H37Rv EMQKLQREHGFNPILGCLPMLAQIPVFLGLYHVLRSFNRT-TGGFGQPHL
MLBr_02710|M.leprae_Br4923 EMQKLQREHGFNPILGCLPMLAQIPVFLGLYHALRSFNRT-TGGFGQPHM
MAV_5310|M.avium_104 EMQKLQREHGFNPILGCLPMLAQIPVFLGLYHVLRSFNRT-TGGFGQPHL
Mflv_0831|M.gilvum_PYR-GCK EMQKLQREHGFNPILGCLPMLAQVPVFLGLYHTLMSFNRT-QTGIGRLGL
Mvan_6075|M.vanbaalenii_PYR-1 EMQKLQREHGFNPILGCLPMLAQIPVFLGLYHVLMSFNRT-QTGIGRLGL
MSMEG_6942|M.smegmatis_MC2_155 EMQKLQKEHGFNPILGCLPMLAQVPVFLGLYHVLMSFNRT-QTGIGRLGL
TH_0761|M.thermoresistible__bu EMQKLQKEHGFNPILGCLPMLAQIPVFIGLFHVLRSFNRTGGFGIGAQHL
MAB_4953c|M.abscessus_ATCC_199 EMQKLQREHGFNPILGCLPMLAQIPVFLGLFHVLRSFNRT-TGGFGQVHM
******:****************:***:**:*.* ***** *:* :
MMAR_5485|M.marinum_M SVVENRLTGNYVFTPTDVGHFLDANLFGAPIGASMTQRGGLDAFVDFSRP
MUL_5074|M.ulcerans_Agy99 SVVENRLTGNYVFTPTDVGHFLDVNLFGAPIGASMTQRGGLDAFVDFSRP
Mb3952c|M.bovis_AF2122/97 SVIENRLTGNYVFSPVDVGHFLDANLFGAPIGAYMTQRSGLDAFVDFSRP
Rv3921c|M.tuberculosis_H37Rv SVIENRLTGNYVFSPVDVGHFLDANLFGAPIGAYMTQRSGLDAFVDFSRP
MLBr_02710|M.leprae_Br4923 SVTENRMTGNYVFTPVDVGHFLDANLWGAPIGAYMTQRSGLDAFIDFSRP
MAV_5310|M.avium_104 SVVQNRLTGNYVFTPTDVGHFLDANLFGAPIGAFMTQRTGLDAFTYFSRP
Mflv_0831|M.gilvum_PYR-GCK SVEENRQLGNYFFSATDVQHFLDANLFGAPLGATMIQQHGLDAFTEFNRT
Mvan_6075|M.vanbaalenii_PYR-1 SVEENRSLPNYFFSATDVGHFLDANLFGAPLGATMIQQHGLDAFTEFNRL
MSMEG_6942|M.smegmatis_MC2_155 SVEENRSLGNYVFSATDVQHFLDANLFGAPLGATMIQQHGLEAFTEFNRL
TH_0761|M.thermoresistible__bu DPEVNRTLPNYFFSAEDVGHFLDANLFGAPIGAWMTQTSGLEAFTVFDRT
MAB_4953c|M.abscessus_ATCC_199 TVEANRATGNYFFSANDVANFLDANLFGAPLGATMIQTTGLDAFTEFNRL
** **.*:. ** :***.**:***:** * * **:** *.*
MMAR_5485|M.marinum_M AVIAVGVPVMVLAGVATYFNSRASVARQSAEAAANPQTAMMNKLALYVFP
MUL_5074|M.ulcerans_Agy99 AVIAVGVPVMVLAGVATYFNSRASVARQSPEAAANPQTAMMNKLALYVFP
Mb3952c|M.bovis_AF2122/97 ALIAVGVPVMILAGIATYFNSRASIARQSAEAAANPQTAMMNKLALYVFP
Rv3921c|M.tuberculosis_H37Rv ALIAVGVPVMILAGIATYFNSRASIARQSAEAAANPQTAMMNKLALYVFP
MLBr_02710|M.leprae_Br4923 AVILVGIPMMVLAGVATYFNSRASIARQSAEAAENPQTALMNKIALYVFP
MAV_5310|M.avium_104 AVIAVGLPVMILAGVATYFNSRASVARQSPEAAANPQTAMMNKLALYVFP
Mflv_0831|M.gilvum_PYR-GCK SVIIVGVPIMILAGIATYFNSRASVARQSPEAAANPQTAMMNKLALYVFP
Mvan_6075|M.vanbaalenii_PYR-1 SVIVVGVPIMIMAGIATYFNSRASVARQSPEAAANPQTAMMNKLALYVFP
MSMEG_6942|M.smegmatis_MC2_155 AVIIVGVPIMILAGIATHFNSRASVARQSVEAAANPQTAMMNKLALYVFP
TH_0761|M.thermoresistible__bu AVIAVGVPLMLAAGIATYFNSRASVARQSPEAAANPQTAIMNKLALYVFP
MAB_4953c|M.abscessus_ATCC_199 AVAGVSIPLMIIAGVATYFNSRASIARQSPEAQANPQTQIMNRLALYVFP
:: *.:*:*: **:**:******:**** ** **** :**::******
MMAR_5485|M.marinum_M LGVVVGGPFLPLAIILYWFSNNIWTFGQQHYVFSMIEKEEEAKKQEALER
MUL_5074|M.ulcerans_Agy99 LGVVVGGPFLPLAIILYWFSNNIWTFGQQHYVFSMIEKEEEAKKQEALER
Mb3952c|M.bovis_AF2122/97 LGVVVGGPFLPLAIILYWFSNNIWTFGQQHYVFGMIEKEEEAKKQEAVRR
Rv3921c|M.tuberculosis_H37Rv LGVVVGGPFLPLAIILYWFSNNIWTFGQQHYVFGMIEKEEEAKKQEAVRR
MLBr_02710|M.leprae_Br4923 FGVVVGGPFLPLAIILYWFSNNIWTFGQQHYVFSMIEKEDEAKKQKAIER
MAV_5310|M.avium_104 LGVVVGGPFLPLAIILYWFANNIWTFGQQHYVFGMIEKEDEAKKQEAIQR
Mflv_0831|M.gilvum_PYR-GCK LGVVVGGPFLPLAIIMYWLANNIWTFGQQHYVFGKIEKEEEQKKLEAIER
Mvan_6075|M.vanbaalenii_PYR-1 LGVVVGGPFLPLAIILYWFANNIWTFGQQHYVFGMIEKEEEQKKLEAIER
MSMEG_6942|M.smegmatis_MC2_155 LGVVVGGPFLPLAVIMYWLANNIWTYGQQHYVFGKIEKEEEAKKAEMLER
TH_0761|M.thermoresistible__bu LGVVVGGPFLPIAIIIYWFANNIWTFGQQHYVFGMIEKEEQAKKEEALAR
MAB_4953c|M.abscessus_ATCC_199 LGVVVGGPFLPIAIILYWVSNNIWTFGQQHYVFNRIAKEEEEKKQADLER
:**********:*:*:**.:*****:*******. * **:: ** : *
MMAR_5485|M.marinum_M RAANAPAPGAKPKRTPKAVAGSNGSPAESEDVSDTDATETSGEEA-----
MUL_5074|M.ulcerans_Agy99 RAANAPAPGPKPKRTPKAVAGSNGSPAESEDVSDTDATETSGEEA-----
Mb3952c|M.bovis_AF2122/97 RAANAPAPGAKPKRSPKTAPATNAAAP-----TEAGDTDDGAESD-----
Rv3921c|M.tuberculosis_H37Rv RAANAPAPGAKPKRSPKTAPATNAAAP-----TEAGDTDDGAESD-----
MLBr_02710|M.leprae_Br4923 RTANAPAPGSKPKYVSTTAPVSVNGFSKDTMISDDGAKLGSQEADSIDWV
MAV_5310|M.avium_104 RAANAPAPGAKPKRNLKAGAG-------------NGVDADAAQSD-----
Mflv_0831|M.gilvum_PYR-GCK RAANAPAPGAKPSRKKKATTDSESVESTTEIEDAEPVAESASGDS-ASAK
Mvan_6075|M.vanbaalenii_PYR-1 RAANAPAPGAKPSRKKKAGTDSAVAGPS----DGAAGAESAGIDE-APS-
MSMEG_6942|M.smegmatis_MC2_155 RAANAPAPGAKPNRMKKAQPGGQAGAEG----EAGSATELTGESS-GTSE
TH_0761|M.thermoresistible__bu RAANAPAPGAKPSRARKAGGASGASAES------ATAAAAPGGEA-DTAE
MAB_4953c|M.abscessus_ATCC_199 RAANAPKPGAKPTR-GKSQPAEQADDSD----ASPEVVESTGTDE-----
*:**** **.**. .:
MMAR_5485|M.marinum_M ---PSGDTKQDKPNSTARNSSPTNRTPRPGAR----PKKRKR--
MUL_5074|M.ulcerans_Agy99 ---PSGDTKRDKPNSTARNSSPTNRTPRPGVR----PKKRKR--
Mb3952c|M.bovis_AF2122/97 ---ASTERPADTSNPARRNSGPSARTPRPGVR----PKKRKR--
Rv3921c|M.tuberculosis_H37Rv ---ASTERPADTSNPARRNSGPSARTPRPGVR----PKKRKR--
MLBr_02710|M.leprae_Br4923 TETKTATTPADKPDCVGYNNNPTSHTRRSGQR----TKRRKR--
MAV_5310|M.avium_104 --------AGATEGQAGGGSDAPSRTPRPGAR----PKKRKR--
Mflv_0831|M.gilvum_PYR-GCK KTTPTAGSTPRNPNRSAAQGGTANRTPKPGAR----PKKKKR--
Mvan_6075|M.vanbaalenii_PYR-1 ETPPAAES----PTTSAAQGGASNRTPRPGAR----PKKRKR--
MSMEG_6942|M.smegmatis_MC2_155 PTTDSGAT----GASGTSGTTPTNRTPKPGAR----PKKRKR--
TH_0761|M.thermoresistible__bu TGSDTRPTPKTKGSGGAGRAPKPGGTPRPGARSGSRPKKKKKKR
MAB_4953c|M.abscessus_ATCC_199 ------DSGGPASPNSTNGSGTTSRTPKPGAR----PDRRRKR-
. * :.* * ..::::