For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MLQRFRRRAARMRRRLSRAFVTLVVVVLTGPVIALIMWPAVLVYRHTGDPALAALAQAAYLAAPYAVYLG VRGAGWALRRLGEAMVRRRDEAQWQRYARLSGLAEIDGMSGVDFERFVAARMHSAGWHIETTRVSGDYGV DLIATNRRDVVAVQCKRYSKTVGVRAVQEVVAGARHYDCTRAMVVSNQDFTRQAQALAATSRCELIGRDR LPRWLVHGEKSAFANAAPPR*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. abscessus ATCC 19977 | MAB_4727c | - | - | 100% (231) | hypothetical protein MAB_4727c |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | - | - | - | - | - |
M. gilvum PYR-GCK | Mflv_4795 | - | 4e-22 | 50.48% (105) | restriction endonuclease |
M. tuberculosis H37Rv | - | - | - | - | - |
M. leprae Br4923 | - | - | - | - | - |
M. marinum M | - | - | - | - | - |
M. avium 104 | MAV_0440 | - | 5e-30 | 49.04% (157) | restriction endonuclease family protein |
M. smegmatis MC2 155 | MSMEG_1765 | - | 3e-25 | 55.24% (105) | restriction endonuclease family protein |
M. thermoresistible (build 8) | TH_0194 | - | 1e-23 | 54.29% (105) | restriction endonuclease family protein |
M. ulcerans Agy99 | - | - | - | - | - |
M. vanbaalenii PYR-1 | Mvan_1653 | - | 4e-23 | 43.21% (162) | restriction endonuclease |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_4795|M.gilvum_PYR-GCK -------MTTLRWRLYAALAIAAGATAHLSGAGWLWTVLAGLLAP----- Mvan_1653|M.vanbaalenii_PYR-1 ----------------MAWGVAAGGTAYLAGAAPGWSVLVALLAP----- TH_0194|M.thermoresistible__bu ---------VSRLKRYLVLAVLAGVAAYLAGLDLIASSLAALTVP----- MSMEG_1765|M.smegmatis_MC2_155 ------------------MGLAAALTGHLAGAGLPWTVAIGMVVP----- MAV_0440|M.avium_104 ------MDKALGALLLLGLGVPWYFTQHTTGS-LPAGCAAGLAGL----- MAB_4727c|M.abscessus_ATCC_199 MMLQRFRRRAARMRRRLSRAFVTLVVVVLTGPVIALIMWPAVLVYRHTGD .. . :* .: Mflv_4795|M.gilvum_PYR-GCK --------VLVVAAPSFVRSVVAGAATPGPRENPVDA------------- Mvan_1653|M.vanbaalenii_PYR-1 --------VATLAAPRFVRATVVGATTPGAGERAVDAGMS---------- TH_0194|M.thermoresistible__bu --------AAVAAAPHFLRGVFHGVTTPAPGEDPTAA------------- MSMEG_1765|M.smegmatis_MC2_155 --------LALAALPRFVLAVVRGARTPGPRESTAAD------------- MAV_0440|M.avium_104 --------AAAVGALWWLSLQRDRLRADAHRRRDVKHARAG--------- MAB_4727c|M.abscessus_ATCC_199 PALAALAQAAYLAAPYAVYLGVRGAGWALRRLGEAMVRRRDEAQWQRYAR . : . Mflv_4795|M.gilvum_PYR-GCK --------DMSGTEFEDYVARIARTCGVPVIMTSMTGDWGVDLIVGHRPH Mvan_1653|M.vanbaalenii_PYR-1 --------AMSGTEFEDHIARIARSCGVPVIMTPLTGDWGVDLIVGHRPH TH_0194|M.thermoresistible__bu ---------MSGREFEDHIARIARSCGVPVIMTSVTGDWGVDLIIGNRPN MSMEG_1765|M.smegmatis_MC2_155 ---------MSGLEFEDYVARIARSCGLPVIMTPLSGDWGVDLIVGRRPH MAV_0440|M.avium_104 ---LRAIDRMSGAEFEDFVAAQLRVAGYVVTPTAGTGDFGVDLIAKKDGV MAB_4727c|M.abscessus_ATCC_199 LSGLAEIDGMSGVDFERFVAARMHSAGWHIETTRVSGDYGVDLIATNRRD *** :** .:* : .* : * :**:***** . Mflv_4795|M.gilvum_PYR-GCK RLAVQCKRLSRPVGAGAVQEVVAGAPMQDCTQTMVVTNHEFTPAARKLAE Mvan_1653|M.vanbaalenii_PYR-1 RLAVQCKRQSRPVGAGAVQEVVAGAPMQDCTQTMVVTNHEFTPAARKLAE TH_0194|M.thermoresistible__bu RLAVQCKRQSRPVGAAAVQEVVAGAPMQDCTRTMVVTNHDFTPAARKLAE MSMEG_1765|M.smegmatis_MC2_155 RIAIQCKRQSRPVGAGAVQEVVAGAPMQDCTRTMVVSNNEFTPAARKLAE MAV_0440|M.avium_104 RMAVQCKRLAKAVGVAAVQQVVAGARQHGCDRTVVVTNQTFTKAARRLAI MAB_4727c|M.abscessus_ATCC_199 VVAVQCKRYSKTVGVRAVQEVVAGARHYDCTRAMVVSNQDFTRQAQALAA :*:**** ::.**. ***:***** .* :::**:*: ** *: ** Mflv_4795|M.gilvum_PYR-GCK LHGCTLVGGADLPRLRSTIRRLTRPAEPPSSSAPRPPP Mvan_1653|M.vanbaalenii_PYR-1 LHGCELVGGADLPRLRSTIRRLT------SS------- TH_0194|M.thermoresistible__bu RHGCELVSGRDLPRLRSIIRRLTV-------------- MSMEG_1765|M.smegmatis_MC2_155 LHGCELVGGDDLPRLRSILRRAAAD----GSRA----- MAV_0440|M.avium_104 THRCRLVG---RTQLRSWTRVAPIPVRGPRVS------ MAB_4727c|M.abscessus_ATCC_199 TSRCELIGRDRLPRWLVHGEKSAFANAAPPR------- * *:. .: . .