For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
TQGFPGGAGVYATASLAAMTSIAPEQSGTSESEAVRGPARWTSLQKIGFRVLFTVGGGILLLSVYDNLGL FGLFEPVLWLSAQIGSFLIRGHGIELTVSSGGDLLWLWCYHLGWVVIALAIVAIWTLSDRHRAHYRRLSA SLWVFARFGLALSMIVYGMAKAIPTQMGYMTLPDQQLQLVGDTSLFNTLWGFMGASEPYSIATGLVELAA GLLLLWNRTWVLGALGSVFAMAQVFLLNMTYDVPVKQVSGELFLIAVAITAPLWPNLVRVVFNRGTRPVR LWSPLGTGRRWLLRTGIVLKFVLAAALTVQCAFLSTLIYSTYKTPTSSLDGVWRATSFTVDGHEATVGQT SPAPWSNVAISHRDKVEEFGVRAFVSQTPDGRTSRWMLEVNGDQLELRKRKSEAPQQVLHAHQSDPDRLV LSGVVEGKQIAGTYERRFMERSKYGFRWVQPEMDPDVVAVGE*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. abscessus ATCC 19977 | MAB_4706c | - | - | 100% (463) | hypothetical protein MAB_4706c |
| M. abscessus ATCC 19977 | MAB_0712c | - | 1e-35 | 33.10% (423) | hypothetical protein MAB_0712c |
| M. abscessus ATCC 19977 | MAB_4302 | - | 3e-34 | 28.75% (393) | hypothetical protein MAB_4302 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | - | - | - | - | - |
| M. gilvum PYR-GCK | - | - | - | - | - |
| M. tuberculosis H37Rv | - | - | - | - | - |
| M. leprae Br4923 | - | - | - | - | - |
| M. marinum M | - | - | - | - | - |
| M. avium 104 | - | - | - | - | - |
| M. smegmatis MC2 155 | MSMEG_5816 | - | 2e-34 | 31.54% (428) | hypothetical protein MSMEG_5816 |
| M. thermoresistible (build 8) | TH_1528 | - | 5e-34 | 30.79% (432) | conserved hypothetical protein |
| M. ulcerans Agy99 | - | - | - | - | - |
| M. vanbaalenii PYR-1 | - | - | - | - | - |
CLUSTAL 2.0.9 multiple sequence alignment
MSMEG_5816|M.smegmatis_MC2_155 -----------------------------MATKIAFRFCFVYFGLFCLVF
TH_1528|M.thermoresistible__bu ------------------VKTADDVQPWNPLTRVAFRFCFLYFGLFCLWF
MAB_4706c|M.abscessus_ATCC_199 MTQGFPGGAGVYATASLAAMTSIAPEQSGTSESEAVRGPARWTSLQKIGF
*.* : .* : *
MSMEG_5816|M.smegmatis_MC2_155 AQILFVFTGFVGRWLPDRAILWQMVLLDPLLSWVGRTVFGVDATLNLDSG
TH_1528|M.thermoresistible__bu AQITFAFTGLVAPMLPQRAVLWQMVVLEPVARWVGRQVFGADVSLHLDSG
MAB_4706c|M.abscessus_ATCC_199 RVLFTVGGGILLLSVYDNLGLFGLFEPVLWLSAQIGSFLIRGHGIELTVS
: . *:: : :. *: :. .: . :.* .
MSMEG_5816|M.smegmatis_MC2_155 SG-DQLVIWLLVFCLFTLAVVATVIWSVLDRARADYTRLWAWFLTFLRLC
TH_1528|M.thermoresistible__bu SG-DQAVIWVMAFCGLVVAVAGTVVWSVLDRRRTEYRRLHAWFLTFLRIC
MAB_4706c|M.abscessus_ATCC_199 SGGDLLWLWCYHLGWVVIALAIVAIWTLSDRHRAHYRRLSASLWVFARFG
** * :* : ..:*:. ..:*:: ** *:.* ** * : .* *:
MSMEG_5816|M.smegmatis_MC2_155 VAGQMLFYGIAKLIPTQMPAPGLAT-LLRPYGEFSPASVLWLQVGSSYPY
TH_1528|M.thermoresistible__bu VGGQMMFYGMAKVIPSQMPAPSLTS-LLQPFGEFSPMAVLWLQVGSSYPY
MAB_4706c|M.abscessus_ATCC_199 LALSMIVYGMAKAIPTQMGYMTLPDQQLQLVGDTSLFNTLWGFMGASEPY
:. .*:.**:** **:** *. *: *: * .** :*:* **
MSMEG_5816|M.smegmatis_MC2_155 EMVLGAVEVLAGILLFVPRTATLGALVGLVSMAQVFLLNMTFDVPVKILS
TH_1528|M.thermoresistible__bu EILLGAVELLAGILLFIPRTATLGALVGLVSMVQVFVLNLTFDVPVKILS
MAB_4706c|M.abscessus_ATCC_199 SIATGLVELAAGLLLLWNRTWVLGALGSVFAMAQVFLLNMTYDVPVKQVS
.: * **: **:**: ** .**** .:.:*.***:**:*:***** :*
MSMEG_5816|M.smegmatis_MC2_155 GHLLLMSFVLLAPQVRRLVDLFVLQRPVGPLSQPELFDDPRSRRISTRVQ
TH_1528|M.thermoresistible__bu SHLLLMTLVLLAPQARRLANVLVLERPADPVVTPRLFESARPNRIAAAVQ
MAB_4706c|M.abscessus_ATCC_199 GELFLIAVAITAPLWPNLVR-VVFNRGTRPVRLWSPLGTGRRWLLRTGIV
..*:*::..: ** .*. .*::* . *: : * : : :
MSMEG_5816|M.smegmatis_MC2_155 AVLGVWALIGCVVITGSGWFEYGGGRDKHELYGIWAVSEFVVDGKPLPPL
TH_1528|M.thermoresistible__bu VALGVWVLAGCVTIGVNGWFEFGGGRPKPELYGIWQVTD-----------
MAB_4706c|M.abscessus_ATCC_199 LKFVLAAALTVQCAFLSTLIYSTYKTPTSSLDGVWRATSFTVDGHEATVG
: : . . : . .* *:* .:.
MSMEG_5816|M.smegmatis_MC2_155 TTDQTRWKHVVFDEPG--------VLTYQRMDGALVPAPAEFDDGTIAVS
TH_1528|M.thermoresistible__bu SAGGPAWRRVVVEEPD--------VLTYQSVSGELE---------TVDLT
MAB_4706c|M.abscessus_ATCC_199 QTSPAPWSNVAISHRDKVEEFGVRAFVSQTPDGRTSRWMLEVNGDQLELR
:. . * .*.... . .:. * .* : :
MSMEG_5816|M.smegmatis_MC2_155 D-DQGGTVADFRVSRPDPQHLELDGRVAGRPAHITLEEVDPNGFTLRNRG
TH_1528|M.thermoresistible__bu T-EPG---STFTFHRTAPDRLELTGRWDSGSFTMTLERVDLSEFPLLGRG
MAB_4706c|M.abscessus_ATCC_199 KRKSEAPQQVLHAHQSDPDRLVLSGVVEGKQIAGTYERR---FMERSKYG
. : :. *::* * * . * *. : *
MSMEG_5816|M.smegmatis_MC2_155 FHWVQEYPYFR------
TH_1528|M.thermoresistible__bu FNWVQEYPYFG------
MAB_4706c|M.abscessus_ATCC_199 FRWVQPEMDPDVVAVGE
*.***