For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
TQGFPGGAGVYATASLAAMTSIAPEQSGTSESEAVRGPARWTSLQKIGFRVLFTVGGGILLLSVYDNLGL FGLFEPVLWLSAQIGSFLIRGHGIELTVSSGGDLLWLWCYHLGWVVIALAIVAIWTLSDRHRAHYRRLSA SLWVFARFGLALSMIVYGMAKAIPTQMGYMTLPDQQLQLVGDTSLFNTLWGFMGASEPYSIATGLVELAA GLLLLWNRTWVLGALGSVFAMAQVFLLNMTYDVPVKQVSGELFLIAVAITAPLWPNLVRVVFNRGTRPVR LWSPLGTGRRWLLRTGIVLKFVLAAALTVQCAFLSTLIYSTYKTPTSSLDGVWRATSFTVDGHEATVGQT SPAPWSNVAISHRDKVEEFGVRAFVSQTPDGRTSRWMLEVNGDQLELRKRKSEAPQQVLHAHQSDPDRLV LSGVVEGKQIAGTYERRFMERSKYGFRWVQPEMDPDVVAVGE*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. abscessus ATCC 19977 | MAB_4706c | - | - | 100% (463) | hypothetical protein MAB_4706c |
M. abscessus ATCC 19977 | MAB_0712c | - | 1e-35 | 33.10% (423) | hypothetical protein MAB_0712c |
M. abscessus ATCC 19977 | MAB_4302 | - | 3e-34 | 28.75% (393) | hypothetical protein MAB_4302 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | - | - | - | - | - |
M. gilvum PYR-GCK | - | - | - | - | - |
M. tuberculosis H37Rv | - | - | - | - | - |
M. leprae Br4923 | - | - | - | - | - |
M. marinum M | - | - | - | - | - |
M. avium 104 | - | - | - | - | - |
M. smegmatis MC2 155 | MSMEG_5816 | - | 2e-34 | 31.54% (428) | hypothetical protein MSMEG_5816 |
M. thermoresistible (build 8) | TH_1528 | - | 5e-34 | 30.79% (432) | conserved hypothetical protein |
M. ulcerans Agy99 | - | - | - | - | - |
M. vanbaalenii PYR-1 | - | - | - | - | - |
CLUSTAL 2.0.9 multiple sequence alignment MSMEG_5816|M.smegmatis_MC2_155 -----------------------------MATKIAFRFCFVYFGLFCLVF TH_1528|M.thermoresistible__bu ------------------VKTADDVQPWNPLTRVAFRFCFLYFGLFCLWF MAB_4706c|M.abscessus_ATCC_199 MTQGFPGGAGVYATASLAAMTSIAPEQSGTSESEAVRGPARWTSLQKIGF *.* : .* : * MSMEG_5816|M.smegmatis_MC2_155 AQILFVFTGFVGRWLPDRAILWQMVLLDPLLSWVGRTVFGVDATLNLDSG TH_1528|M.thermoresistible__bu AQITFAFTGLVAPMLPQRAVLWQMVVLEPVARWVGRQVFGADVSLHLDSG MAB_4706c|M.abscessus_ATCC_199 RVLFTVGGGILLLSVYDNLGLFGLFEPVLWLSAQIGSFLIRGHGIELTVS : . *:: : :. *: :. .: . :.* . MSMEG_5816|M.smegmatis_MC2_155 SG-DQLVIWLLVFCLFTLAVVATVIWSVLDRARADYTRLWAWFLTFLRLC TH_1528|M.thermoresistible__bu SG-DQAVIWVMAFCGLVVAVAGTVVWSVLDRRRTEYRRLHAWFLTFLRIC MAB_4706c|M.abscessus_ATCC_199 SGGDLLWLWCYHLGWVVIALAIVAIWTLSDRHRAHYRRLSASLWVFARFG ** * :* : ..:*:. ..:*:: ** *:.* ** * : .* *: MSMEG_5816|M.smegmatis_MC2_155 VAGQMLFYGIAKLIPTQMPAPGLAT-LLRPYGEFSPASVLWLQVGSSYPY TH_1528|M.thermoresistible__bu VGGQMMFYGMAKVIPSQMPAPSLTS-LLQPFGEFSPMAVLWLQVGSSYPY MAB_4706c|M.abscessus_ATCC_199 LALSMIVYGMAKAIPTQMGYMTLPDQQLQLVGDTSLFNTLWGFMGASEPY :. .*:.**:** **:** *. *: *: * .** :*:* ** MSMEG_5816|M.smegmatis_MC2_155 EMVLGAVEVLAGILLFVPRTATLGALVGLVSMAQVFLLNMTFDVPVKILS TH_1528|M.thermoresistible__bu EILLGAVELLAGILLFIPRTATLGALVGLVSMVQVFVLNLTFDVPVKILS MAB_4706c|M.abscessus_ATCC_199 SIATGLVELAAGLLLLWNRTWVLGALGSVFAMAQVFLLNMTYDVPVKQVS .: * **: **:**: ** .**** .:.:*.***:**:*:***** :* MSMEG_5816|M.smegmatis_MC2_155 GHLLLMSFVLLAPQVRRLVDLFVLQRPVGPLSQPELFDDPRSRRISTRVQ TH_1528|M.thermoresistible__bu SHLLLMTLVLLAPQARRLANVLVLERPADPVVTPRLFESARPNRIAAAVQ MAB_4706c|M.abscessus_ATCC_199 GELFLIAVAITAPLWPNLVR-VVFNRGTRPVRLWSPLGTGRRWLLRTGIV ..*:*::..: ** .*. .*::* . *: : * : : : MSMEG_5816|M.smegmatis_MC2_155 AVLGVWALIGCVVITGSGWFEYGGGRDKHELYGIWAVSEFVVDGKPLPPL TH_1528|M.thermoresistible__bu VALGVWVLAGCVTIGVNGWFEFGGGRPKPELYGIWQVTD----------- MAB_4706c|M.abscessus_ATCC_199 LKFVLAAALTVQCAFLSTLIYSTYKTPTSSLDGVWRATSFTVDGHEATVG : : . . : . .* *:* .:. MSMEG_5816|M.smegmatis_MC2_155 TTDQTRWKHVVFDEPG--------VLTYQRMDGALVPAPAEFDDGTIAVS TH_1528|M.thermoresistible__bu SAGGPAWRRVVVEEPD--------VLTYQSVSGELE---------TVDLT MAB_4706c|M.abscessus_ATCC_199 QTSPAPWSNVAISHRDKVEEFGVRAFVSQTPDGRTSRWMLEVNGDQLELR :. . * .*.... . .:. * .* : : MSMEG_5816|M.smegmatis_MC2_155 D-DQGGTVADFRVSRPDPQHLELDGRVAGRPAHITLEEVDPNGFTLRNRG TH_1528|M.thermoresistible__bu T-EPG---STFTFHRTAPDRLELTGRWDSGSFTMTLERVDLSEFPLLGRG MAB_4706c|M.abscessus_ATCC_199 KRKSEAPQQVLHAHQSDPDRLVLSGVVEGKQIAGTYERR---FMERSKYG . : :. *::* * * . * *. : * MSMEG_5816|M.smegmatis_MC2_155 FHWVQEYPYFR------ TH_1528|M.thermoresistible__bu FNWVQEYPYFG------ MAB_4706c|M.abscessus_ATCC_199 FRWVQPEMDPDVVAVGE *.***