For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
TQATATWRPSTRVAFRFCVVYFGLFCVLLTQIPFALLGVVGRVVGGRFALTAMSLLNPLTSWVGSNLFGV NAVLHEDSGSGDQAAIWVLVFCILVLAIAASTVWTVLDRRLSYPRLLAWFTLFLRLCLGGQMLFYGFAKL IPTQMPGPTLAQLLQPYGTLSPASVLWLQVGSSHPYEMALGAVEVIAGLLLFVPRTAVLGTMLSLASMAQ VFLMNMTFDVPVKLLSFHLLLISLVLLAPYLDRLLDFFVRQRASEPLSQPPLFNDHRRNRLAIWAQVMIG LWVALGGVYDGWTTWHEYGGGGPKSELYGIWSVQAFFVDGTYVPPVATDRSRWQTIIFDQPGAATYQRMN GELVVVSTEFDDGHLKLADISDNSGGKVGGKAPFADLTYSQPNVDSLLLGGKLYGKPVTVMLKRMDPETF PLRSRGFHWVQEYPFFR*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. abscessus ATCC 19977 | MAB_0712c | - | - | 100% (438) | hypothetical protein MAB_0712c |
| M. abscessus ATCC 19977 | MAB_4302 | - | 4e-72 | 37.95% (448) | hypothetical protein MAB_4302 |
| M. abscessus ATCC 19977 | MAB_4706c | - | 1e-35 | 33.10% (423) | hypothetical protein MAB_4706c |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | - | - | - | - | - |
| M. gilvum PYR-GCK | - | - | - | - | - |
| M. tuberculosis H37Rv | - | - | - | - | - |
| M. leprae Br4923 | - | - | - | - | - |
| M. marinum M | - | - | - | - | - |
| M. avium 104 | - | - | - | - | - |
| M. smegmatis MC2 155 | MSMEG_5816 | - | 1e-145 | 58.74% (429) | hypothetical protein MSMEG_5816 |
| M. thermoresistible (build 8) | TH_1528 | - | 1e-116 | 49.42% (431) | conserved hypothetical protein |
| M. ulcerans Agy99 | - | - | - | - | - |
| M. vanbaalenii PYR-1 | - | - | - | - | - |
CLUSTAL 2.0.9 multiple sequence alignment
MSMEG_5816|M.smegmatis_MC2_155 -----------MATKIAFRFCFVYFGLFCLVFAQILFVFTGFVGRWLPDR
TH_1528|M.thermoresistible__bu VKTADDVQPWNPLTRVAFRFCFLYFGLFCLWFAQITFAFTGLVAPMLPQR
MAB_0712c|M.abscessus_ATCC_199 --MTQATATWRPSTRVAFRFCVVYFGLFCVLLTQIPFALLGVVGRVVGGR
*::*****.:******: ::** *.: *.*. : *
MSMEG_5816|M.smegmatis_MC2_155 AILWQMVLLDPLLSWVGRTVFGVDATLNLDSGSGDQLVIWLLVFCLFTLA
TH_1528|M.thermoresistible__bu AVLWQMVVLEPVARWVGRQVFGADVSLHLDSGSGDQAVIWVMAFCGLVVA
MAB_0712c|M.abscessus_ATCC_199 FALTAMSLLNPLTSWVGSNLFGVNAVLHEDSGSGDQAAIWVLVFCILVLA
* * :*:*: *** :**.:. *: ******* .**::.** :.:*
MSMEG_5816|M.smegmatis_MC2_155 VVATVIWSVLDRARADYTRLWAWFLTFLRLCVAGQMLFYGIAKLIPTQMP
TH_1528|M.thermoresistible__bu VAGTVVWSVLDRRRTEYRRLHAWFLTFLRICVGGQMMFYGMAKVIPSQMP
MAB_0712c|M.abscessus_ATCC_199 IAASTVWTVLDR-RLSYPRLLAWFTLFLRLCLGGQMLFYGFAKLIPTQMP
:..:.:*:**** * .* ** *** ***:*:.***:***:**:**:***
MSMEG_5816|M.smegmatis_MC2_155 APGLATLLRPYGEFSPASVLWLQVGSSYPYEMVLGAVEVLAGILLFVPRT
TH_1528|M.thermoresistible__bu APSLTSLLQPFGEFSPMAVLWLQVGSSYPYEILLGAVELLAGILLFIPRT
MAB_0712c|M.abscessus_ATCC_199 GPTLAQLLQPYGTLSPASVLWLQVGSSHPYEMALGAVEVIAGLLLFVPRT
.* *: **:*:* :** :*********:***: *****::**:***:***
MSMEG_5816|M.smegmatis_MC2_155 ATLGALVGLVSMAQVFLLNMTFDVPVKILSGHLLLMSFVLLAPQVRRLVD
TH_1528|M.thermoresistible__bu ATLGALVGLVSMVQVFVLNLTFDVPVKILSSHLLLMTLVLLAPQARRLAN
MAB_0712c|M.abscessus_ATCC_199 AVLGTMLSLASMAQVFLMNMTFDVPVKLLSFHLLLISLVLLAPYLDRLLD
*.**:::.*.**.***::*:*******:** ****:::***** ** :
MSMEG_5816|M.smegmatis_MC2_155 LFVLQRPVGPLSQPELFDDPRSRRISTRVQAVLGVWALIGCVVITGSGWF
TH_1528|M.thermoresistible__bu VLVLERPADPVVTPRLFESARPNRIAAAVQVALGVWVLAGCVTIGVNGWF
MAB_0712c|M.abscessus_ATCC_199 FFVRQRASEPLSQPPLFNDHRRNRLAIWAQVMIGLWVALGGVYDGWTTWH
.:* :*. *: * **:. * .*:: .*. :*:*. * * . *.
MSMEG_5816|M.smegmatis_MC2_155 EYGGGRDKHELYGIWAVSEFVVDGKPLPPLTTDQTRWKHVVFDEPGVLTY
TH_1528|M.thermoresistible__bu EFGGGRPKPELYGIWQVTD-----------SAGGPAWRRVVVEEPDVLTY
MAB_0712c|M.abscessus_ATCC_199 EYGGGGPKSELYGIWSVQAFFVDGTYVPPVATDRSRWQTIIFDQPGAATY
*:*** * ****** * ::. . *: ::.::*.. **
MSMEG_5816|M.smegmatis_MC2_155 QRMDGALVPAPAEFDD---GTIAVSDDQGGTV------ADFRVSRPDPQH
TH_1528|M.thermoresistible__bu QSVSGELE------------TVDLTTEPG---------STFTFHRTAPDR
MAB_0712c|M.abscessus_ATCC_199 QRMNGELVVVSTEFDDGHLKLADISDNSGGKVGGKAPFADLTYSQPNVDS
* :.* * :: : * : : :. :
MSMEG_5816|M.smegmatis_MC2_155 LELDGRVAGRPAHITLEEVDPNGFTLRNRGFHWVQEYPYFR
TH_1528|M.thermoresistible__bu LELTGRWDSGSFTMTLERVDLSEFPLLGRGFNWVQEYPYFG
MAB_0712c|M.abscessus_ATCC_199 LLLGGKLYGKPVTVMLKRMDPETFPLRSRGFHWVQEYPFFR
* * *: . . : *:.:* . *.* .***:******:*