For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
PRFSPAVIDHFTNPRNAGRLDQADVTAFIGNPVCGDQILLSAQIRDEVVSRIGFEAYGCSASLAVASILT ERLSGMPVRDIETIQAAQVIEWSGGLSPEQQHVAALGADVAQRLANNYRNGIHEDVSALPGS*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. abscessus ATCC 19977 | MAB_4674c | - | - | 100% (133) | similarity with nitrogen-fixing NifU-like proteins |
| M. abscessus ATCC 19977 | MAB_2745c | - | 2e-09 | 27.63% (76) | SUF system FeS assembly protein |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb1500 | - | 2e-09 | 28.57% (112) | nitrogen fixation related protein |
| M. gilvum PYR-GCK | Mflv_3673 | - | 4e-09 | 31.03% (87) | NifU family SUF system FeS assembly protein |
| M. tuberculosis H37Rv | Rv1465 | - | 2e-09 | 28.57% (112) | nitrogen fixation related protein |
| M. leprae Br4923 | MLBr_00597 | - | 4e-09 | 31.03% (87) | hypothetical protein MLBr_00597 |
| M. marinum M | MMAR_2270 | - | 9e-09 | 26.55% (113) | nitrogen fixation related protein |
| M. avium 104 | MAV_3314 | - | 4e-11 | 30.39% (102) | SUF system FeS assembly protein, NifU family protein |
| M. smegmatis MC2 155 | MSMEG_3126 | - | 7e-09 | 29.89% (87) | SUF system FeS assembly protein, NifU family protein |
| M. thermoresistible (build 8) | TH_1612 | - | 2e-10 | 32.56% (86) | POSSIBLE NITROGEN FIXATION RELATED PROTEIN |
| M. ulcerans Agy99 | MUL_1866 | - | 6e-09 | 26.55% (113) | nitrogen fixation related protein |
| M. vanbaalenii PYR-1 | Mvan_2737 | - | 1e-08 | 29.89% (87) | NifU family SUF system FeS assembly protein |
CLUSTAL 2.0.9 multiple sequence alignment
MMAR_2270|M.marinum_M --MRLEQMYQDVILDHYKHPQHRGLREPFATQVSHVNPVCGDEVTLRVTL
MUL_1866|M.ulcerans_Agy99 --MRLEQMYQDVILDHYKHPQHRGLREPFATQVSHVNPVCGDEVTLRVTL
MAV_3314|M.avium_104 --MRLEQMYQDVILDHYKHPQHRGLREPFGAEVFHVNPVCGDEVTLRVTL
Mflv_3673|M.gilvum_PYR-GCK --MRLEQIYQEVILDHYKHPHHRGLREPFAAEVHHVNPTCGDEVTLRVAV
Mvan_2737|M.vanbaalenii_PYR-1 --MRLEQIYQEVILDHYKHPHHRGLREPFAAEVHHVNPTCGDEVTLRVTL
MSMEG_3126|M.smegmatis_MC2_155 --MRLEQMYQEVILDHYKHPHHRGLREPFGAEVHHVNPTCGDEVTLRVTL
TH_1612|M.thermoresistible__bu -------MYQDVILEHYKHPLNRGLREPFDAESYQVNPTCGDEVRLRVTL
Mb1500|M.bovis_AF2122/97 MTLRLEQIYQDVILDHYKHPQHRGLREPFGAQVYHVNPICGDEVTLRVAL
Rv1465|M.tuberculosis_H37Rv MTLRLEQIYQDVILDHYKHPQHRGLREPFGAQVYHVNPICGDEVTLRVAL
MLBr_00597|M.leprae_Br4923 MILRLEQIYQEVILDHYKHPQHRGLREPFCAQVYHVNPICGDEITLRVAL
MAB_4674c|M.abscessus_ATCC_199 -----MPRFSPAVIDHFTNPRNAGRLDQADVTAFIGNPVCGDQILLSAQI
:. .:::*:.:* : * : . ** ***:: * . :
MMAR_2270|M.marinum_M SNDGATIADVSYDGQGCSISQAATSVLTQQVIGQTVPEALETVDAFSQMV
MUL_1866|M.ulcerans_Agy99 SNDGATIADVSYDGQGCSISQAATSVLTQQVIGQTVPEALETVDAFSQMV
MAV_3314|M.avium_104 SDDGETVADVSYDGQGCSISQAATSVLTEQVIGRSVEEALDTIGAFAEMV
Mflv_3673|M.gilvum_PYR-GCK SDDGETVTDISYDGQGCSISQASTSVLTDQVIGQTVGDALKTVAAFTEMV
Mvan_2737|M.vanbaalenii_PYR-1 SEDGETVTDISYDGQGCSISQAATSVLTDQVIGQSVGDALKTVAAFSEMV
MSMEG_3126|M.smegmatis_MC2_155 SDDGESVEDVSYDGQGCSISQAATSVLTDQVIGQSVGDALKTVDAFTEMV
TH_1612|M.thermoresistible__bu G-DGDVVRDVSYEGQGCSISQAATSVLTDLVIGQKVEDALRTVAAFTEMV
Mb1500|M.bovis_AF2122/97 SEDGTRVTDVSYDGQGCSISQAATSVLTEQVIGQRVPRALNIVDAFTEMV
Rv1465|M.tuberculosis_H37Rv SEDGTRVTDVSYDGQGCSISQAATSVLTEQVIGQRVPRALNIVDAFTEMV
MLBr_00597|M.leprae_Br4923 SDNGASVADISYEGQGCSISQASISVLAQQVIGQSVPDALNIISAFTEMV
MAB_4674c|M.abscessus_ATCC_199 R--DEVVSRIGFEAYGCSASLAVASILTERLSGMPVRD-IETIQAAQVIE
. : :.::. *** * * *:*:: : * * : : * :
MMAR_2270|M.marinum_M SSRGTVQGDEDVLGDGVAFAGVAKYPARVKCALLGWMAFKDALAQAIT--
MUL_1866|M.ulcerans_Agy99 SSRGTVQGDEDVLGDGVAFAGVAKYPARVKCALLGWMAFKDALAQAIT--
MAV_3314|M.avium_104 SSRGAVEGDEDVLGDGIAFAGVAKYPARVKCALLGWMACKDALAQAYS--
Mflv_3673|M.gilvum_PYR-GCK SSRGKIDGDEDVLGDGIAFAGVSKYPARVKCALLGWTAFKAALAEA----
Mvan_2737|M.vanbaalenii_PYR-1 SSRGKVDGDEDVLGDGIAFAGVSKYPARVKCALLGWTAFKAALAQA----
MSMEG_3126|M.smegmatis_MC2_155 SSRGTVEGDEDVIGDGIAFAGVAKYPARVKCALLGWMAFKAAVAEARPLD
TH_1612|M.thermoresistible__bu TSRGKVDGDEDVIGDGIAFAGVAKYPARVKCALLGWMAFKDAVAQA----
Mb1500|M.bovis_AF2122/97 SSRGTVPGDEDVLGDGVAFAGVAKYPARVKCALLGWMAFKDALAQAS---
Rv1465|M.tuberculosis_H37Rv SSRGTVPGDEDVLGDGVAFAGVAKYPARVKCALLGWMAFKDALAQAS---
MLBr_00597|M.leprae_Br4923 SSRGTIEGDEDVLGDGVAFAGVAKYPARVKCALLGWMACKDALIHANS--
MAB_4674c|M.abscessus_ATCC_199 WSGGLSPEQQHVAALGADVAQRLANNYRN-----GIHEDVSALPGS----
* * ::.* . * .* * * *: :
MMAR_2270|M.marinum_M --ANALAEGGEHVEEVSDE
MUL_1866|M.ulcerans_Agy99 --ANALAEGGGHVEEVSDE
MAV_3314|M.avium_104 --RREVTDERNHRAG----
Mflv_3673|M.gilvum_PYR-GCK --HG--PENSEGEST----
Mvan_2737|M.vanbaalenii_PYR-1 --HG--PEISE-EN-----
MSMEG_3126|M.smegmatis_MC2_155 ETHATLAEAGEREDNR---
TH_1612|M.thermoresistible__bu ------ARTQDLEEAR---
Mb1500|M.bovis_AF2122/97 ---EAFEEVTDERNQRTG-
Rv1465|M.tuberculosis_H37Rv ---EAFEEVTDERNQRTG-
MLBr_00597|M.leprae_Br4923 -ADKVLEEVMDEQNHRVG-
MAB_4674c|M.abscessus_ATCC_199 -------------------