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VSYDAHLRVWRGDDDGGELIDFTVPVSEGEVVLDIIHRIQATQASDLAVRWNCKAGKCGSCSAEINGRPR LMCMTRMSTFDESETITVTPLRAFPVIRDLVTDVSFNYQKAREVQSFTPPKGLKPGDYRMQQEDVERSQE FRKCIECFLCQNTCHAVRDHEENKKAFAGPRYLMRVAELEMHPLDVADRREVAQEELGLGYCNITKCCTE VCPEGIHITDNALIPMKERVADRKYDPIVWLGNKLFRR
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. abscessus ATCC 19977 | MAB_4423 | - | - | 100% (248) | fumarate reductase iron-sulfur subunit |
M. abscessus ATCC 19977 | MAB_3676 | sdhB | 5e-18 | 27.91% (215) | succinate dehydrogenase iron-sulfur subunit |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0253c | - | 1e-121 | 80.65% (248) | fumarate reductase iron-sulfur subunit |
M. gilvum PYR-GCK | Mflv_0395 | - | 1e-123 | 82.66% (248) | fumarate reductase iron-sulfur subunit |
M. tuberculosis H37Rv | Rv0247c | - | 1e-121 | 80.65% (248) | fumarate reductase iron-sulfur subunit |
M. leprae Br4923 | MLBr_00696 | sdhB | 1e-16 | 28.64% (206) | succinate dehydrogenase iron-sulfur subunit |
M. marinum M | MMAR_0510 | sdhB_1 | 1e-123 | 81.45% (248) | succinate dehydrogenase (iron-sulfur subunit), SdhB_1 |
M. avium 104 | MAV_4910 | - | 1e-124 | 81.45% (248) | fumarate reductase iron-sulfur subunit |
M. smegmatis MC2 155 | MSMEG_0417 | - | 1e-126 | 83.40% (247) | fumarate reductase iron-sulfur subunit |
M. thermoresistible (build 8) | TH_1916 | - | 1e-122 | 80.72% (249) | PROBABLE SUCCINATE DEHYDROGENASE |
M. ulcerans Agy99 | MUL_1171 | sdhB_1 | 1e-123 | 81.85% (248) | fumarate reductase iron-sulfur subunit |
M. vanbaalenii PYR-1 | Mvan_0283 | - | 1e-120 | 80.65% (248) | fumarate reductase iron-sulfur subunit |
CLUSTAL 2.0.9 multiple sequence alignment Mb0253c|M.bovis_AF2122/97 ----------------------MTYSASMRVWRGDE-----SCGELREFT Rv0247c|M.tuberculosis_H37Rv ----------------------MTYSASMRVWRGDE-----SCGELREFT MMAR_0510|M.marinum_M ----------------------MGYNASLRVWRGDE-----SNGELRDFT MUL_1171|M.ulcerans_Agy99 ----------------------MGYNASLRVWRGDE-----SNGELRDFT MAV_4910|M.avium_104 ----------------------MTYNAKMRVWRGDD-----ANGALQDFT TH_1916|M.thermoresistible__bu ----------------------MGYQAKLRVWRGDD-----DGGALQDYS Mflv_0395|M.gilvum_PYR-GCK ---------------------MAAYNAKLRVWRGDD-----TGGELKDFT Mvan_0283|M.vanbaalenii_PYR-1 ---------------------MAAYQGKLRVWRGDD-----TGGGLQDFT MSMEG_0417|M.smegmatis_MC2_155 ---------------------MATYDAKLRVWRGDD-----TGGELHDYT MAB_4423|M.abscessus_ATCC_1997 ----------------------MSYDAHLRVWRGDD-----DGGELIDFT MLBr_00696|M.leprae_Br4923 MAVEPVEVKSLEPPRPPISDDAVMVTVKIARFNPDNPDAFAETGGWQSFR : :. *: * .: Mb0253c|M.bovis_AF2122/97 VEVNEGEVVLDVILRLQQTQTPDLAVRWNCKAGKCGSCSAEINGKPRLMC Rv0247c|M.tuberculosis_H37Rv VEVNEGEVVLDVILRLQQTQTPDLAVRWNCKAGKCGSCSAEINGKPRLMC MMAR_0510|M.marinum_M VEVNEGEVVLDVIHRLQQTQTPDLAVRWNCKAGKCGSCSAEINGKPRLMC MUL_1171|M.ulcerans_Agy99 VEVNEGEVVLDVIHRLQQTQTPDLAVRWNCKAGKCGSCSAEINGKPRLMC MAV_4910|M.avium_104 VEVNEGEVVLDIIHRLQQTQTPDLAVRWNCKAGKCGSCSAEINGYPRLLC TH_1916|M.thermoresistible__bu VEVNEGEVVLDIIHRLQQTQTPDLAVRWNCKAGKCGSCSAEINGRPRLMC Mflv_0395|M.gilvum_PYR-GCK VEVNEGEVVLDIIHRLQATQTPDLAVRWNCKAGKCGSCSAEINGRPRLLC Mvan_0283|M.vanbaalenii_PYR-1 VEVNDGEVVLDIIHRLQATQTPDLAVRWNCKAGKCGSCSAEINGRPRLLC MSMEG_0417|M.smegmatis_MC2_155 VEVNDGEVVLDIIHRLQATQTPDLAVRWNCKAGKCGSCSAEINGRPRLMC MAB_4423|M.abscessus_ATCC_1997 VPVSEGEVVLDIIHRIQATQASDLAVRWNCKAGKCGSCSAEINGRPRLMC MLBr_00696|M.leprae_Br4923 VPCLPTDRLLNLLIYIKGYLDGTLTFRRSCAHGVCGSDAMRVNGVNRLAC * : :*::: :: *:.* .* * *** : .:** ** * Mb0253c|M.bovis_AF2122/97 MTRMSTFD-----EDEIVTVTPMRTFPVIRDLVTDVSFNYQKAREIPSFA Rv0247c|M.tuberculosis_H37Rv MTRMSTFD-----EDEIVTVTPMRTFPVIRDLVTDVSFNYQKAREIPSFA MMAR_0510|M.marinum_M MTRMSTFA-----EDEIVTVTPLRTFPVIRDLVTDVSFNYEKAREIPSFA MUL_1171|M.ulcerans_Agy99 MTRMSTFA-----EDEIVTVTPLRTFPVIRDLVTDVSFNYEKAREIPSFA MAV_4910|M.avium_104 MTRMSTFA-----EDEVVTVTPLRTFPVIRDLVTDVSFNYEKAREIPSFA TH_1916|M.thermoresistible__bu MTRMSTFA-----ENEVITVTPMRTFPVIRDLVNDVSFNFEKAREIPSFR Mflv_0395|M.gilvum_PYR-GCK MTRMSTFG-----EDEVVTVTPLRTFPVMRDLVTDVSFNYEKAREIPAFT Mvan_0283|M.vanbaalenii_PYR-1 MTRMSTFG-----EDEVVTVTPLRTFPVMRDLVTDVSFNYEKAREIPSFA MSMEG_0417|M.smegmatis_MC2_155 MTRMSTFG-----EDEVVTVTPLRTFPVMRDLVTDVSFNYEKARQIPSFT MAB_4423|M.abscessus_ATCC_1997 MTRMSTFD-----ESETITVTPLRAFPVIRDLVTDVSFNYQKAREVQSFT MLBr_00696|M.leprae_Br4923 KVLMRDLLPKKAGKNLTITVEPIRGLPVEKDLVVDMEPFFDAYRAVKPYL . * : :. :** *:* :** :*** *:. :: * : .: Mb0253c|M.bovis_AF2122/97 PPKELQPSEYRMAQ-VDVARSQEFRKCIECFLCQNVCHVVRDHEENKDAF Rv0247c|M.tuberculosis_H37Rv PPKELQPSEYRMAQ-VDVARSQEFRKCIECFLCQNVCHVVRDHEENKDAF MMAR_0510|M.marinum_M PPKELQPGEYRMAQ-VDVARSQEFRKCIECFLCQNVCHVIRDHEENKKAF MUL_1171|M.ulcerans_Agy99 PPKELQPGEYRMAQ-VDVARSQEFRKCIECFLCQNVCHVIRDHEENKKAF MAV_4910|M.avium_104 PPKDLQPGEYRMAQ-EDVQRSQEFRKCIECFLCQNVCHVIRDHDENKKAF TH_1916|M.thermoresistible__bu PPKDLQPGEYRMQQ-EDVNRSQEFRKCIECFLCQNVCHVIRDHEDNKKAF Mflv_0395|M.gilvum_PYR-GCK PPKDLQPGEYRMQQ-EDVNRSQEFRKCIECFLCQNVCHVVRDHEENKLAF Mvan_0283|M.vanbaalenii_PYR-1 PPKNLQPGEYRMAQ-EDVNRSQEFRKCIECFLCQNVCHVNRDHEENKLAF MSMEG_0417|M.smegmatis_MC2_155 PPKDLQPGEYRMQQ-EDVNRSQEFRKCIECFLCQNVCHVVRDHEENKENF MAB_4423|M.abscessus_ATCC_1997 PPKGLKPGDYRMQQ-EDVERSQEFRKCIECFLCQNTCHAVRDHEENKKAF MLBr_00696|M.leprae_Br4923 ITSGNPPTRERIQSPTDRARYDDTTKCILCACCTTSCPVFWSEG----TY .. * *: . * * :: *** * * . * . .. : Mb0253c|M.bovis_AF2122/97 AGPRFLMRIAELEMHPLDTR--DRRSQAQEEHGLGYCNITKCCTEVCPEN Rv0247c|M.tuberculosis_H37Rv AGPRFLMRIAELEMHPLDTR--DRRSQAQEEHGLGYCNITKCCTEVCPEN MMAR_0510|M.marinum_M AGPRFLMRIAELEMHPLDTR--DRRNEAQEAHGLGYCNITKCCTEVCPEN MUL_1171|M.ulcerans_Agy99 AGPRFLMRVAELEMHPLDTR--DRRNEAQEAHGLGYCNITKCCTEVCPEN MAV_4910|M.avium_104 AGPRFLMRIAELEMHPLDTR--DRRNDAQDEHGLGYCNITKCCTEVCPEN TH_1916|M.thermoresistible__bu AGPRFLMRMAELDMHPLDTHP-NRAEEVQDEHGLGYCNITKCCTEVCPEH Mflv_0395|M.gilvum_PYR-GCK SGPRFLMRQAELDMHPLDTHG-HRSEQAQEENGLGYCNITKCCTEVCPEH Mvan_0283|M.vanbaalenii_PYR-1 SGPRYLMRQAELDMHPLDTHG-HRAEQAQDENGLGYCNITKCCTEVCPEH MSMEG_0417|M.smegmatis_MC2_155 AGPRFHMRIAELDMHPLDTVD--RKEMAQDEFGLGYCNITKCCTEVCPEH MAB_4423|M.abscessus_ATCC_1997 AGPRYLMRVAELEMHPLDVA--DRREVAQEELGLGYCNITKCCTEVCPEG MLBr_00696|M.leprae_Br4923 YGPAAIVNAHRFIFDSRDEGAGERLTLLNEVDGVWRCRTTFNCTESCPRN ** :. .: :.. * * :: *: *. * *** **. Mb0253c|M.bovis_AF2122/97 IKITDNALIPMKERVADRKYDPVVWLGSKLFRR- Rv0247c|M.tuberculosis_H37Rv IKITDNALIPMKERVADRKYDPVVWLGSKLFRR- MMAR_0510|M.marinum_M IKITDNALIPMKERVVDRKYDPVVWLGNKLFRR- MUL_1171|M.ulcerans_Agy99 IKITDNALIPMKERVVDRKYDPVVWLGNKLFRR- MAV_4910|M.avium_104 IKITDNALIPMKERVADRKYDPVVWLGNKLFRR- TH_1916|M.thermoresistible__bu IKITDNALIPMKERVADRKYDPVVWLGNKLFRRQ Mflv_0395|M.gilvum_PYR-GCK IKITDNALIPMKERAADRKYDPVVWLGNKLFRRK Mvan_0283|M.vanbaalenii_PYR-1 IKITDNALIPMKERAADRKYDPVVWLGNKLFRRR MSMEG_0417|M.smegmatis_MC2_155 IKITDNALIPMKERVADRKYDPIVWLGNKLFRR- MAB_4423|M.abscessus_ATCC_1997 IHITDNALIPMKERVADRKYDPIVWLGNKLFRR- MLBr_00696|M.leprae_Br4923 IEVTKAIQEVKRALMFSR---------------- *.:*. : .*