For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
TVVEVPGGYGSAMTVDAGSLIKIVNPAGTQVVDFWAHQRADLSEHLGLGQCREVLERIYFRTGDTLISNR YNAMLTVMADDTGILHDTLIAPCSRAMYGFLGLDPDHRSCTSNYHEALPERAAADPPQPWNLFMTAQVRT DGAIQYARPPMQPGMSVTLKALTDLVIVVSACPDDHYPTNGGDGSPRPVTVEISGDA*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. abscessus ATCC 19977 | MAB_4349c | - | - | 100% (198) | hypothetical protein MAB_4349c |
| M. abscessus ATCC 19977 | MAB_4092 | - | 1e-11 | 26.04% (192) | hypothetical protein MAB_4092 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | - | - | - | - | - |
| M. gilvum PYR-GCK | Mflv_5134 | - | 2e-10 | 31.82% (176) | aminomethyltransferase |
| M. tuberculosis H37Rv | - | - | - | - | - |
| M. leprae Br4923 | - | - | - | - | - |
| M. marinum M | - | - | - | - | - |
| M. avium 104 | - | - | - | - | - |
| M. smegmatis MC2 155 | MSMEG_2968 | - | 7e-26 | 36.07% (183) | hypothetical protein MSMEG_2968 |
| M. thermoresistible (build 8) | TH_0713 | - | 9e-14 | 31.02% (187) | conserved hypothetical protein |
| M. ulcerans Agy99 | - | - | - | - | - |
| M. vanbaalenii PYR-1 | Mvan_0110 | - | 9e-18 | 32.47% (154) | hypothetical protein Mvan_0110 |
CLUSTAL 2.0.9 multiple sequence alignment
MSMEG_2968|M.smegmatis_MC2_155 --------------------------------------------------
Mvan_0110|M.vanbaalenii_PYR-1 --------------------------------------------------
MAB_4349c|M.abscessus_ATCC_199 --------------------------------------------------
Mflv_5134|M.gilvum_PYR-GCK MAPGSVTAVPVFGGDRFDIVDQYGRQPAELTVLAADPRAVADAPPDTAAT
TH_0713|M.thermoresistible__bu --------------------------------------------------
MSMEG_2968|M.smegmatis_MC2_155 --------------------------------------------------
Mvan_0110|M.vanbaalenii_PYR-1 --------------------------------------------------
MAB_4349c|M.abscessus_ATCC_199 --------------------------------------------------
Mflv_5134|M.gilvum_PYR-GCK VLRSLIPGSDENGYAAQRILSLLARHRVDQQEAVATRLFGHHSPAGSRAT
TH_0713|M.thermoresistible__bu --------------------------------------------------
MSMEG_2968|M.smegmatis_MC2_155 -----------------------------------------------MDV
Mvan_0110|M.vanbaalenii_PYR-1 -----------------------------------------------MSI
MAB_4349c|M.abscessus_ATCC_199 --------------------------------------------------
Mflv_5134|M.gilvum_PYR-GCK FTVDADAVVLVAAPASPMHPHSDDPNPPSEVRVAVYRADPGRPATPELPP
TH_0713|M.thermoresistible__bu ----------------------------------------------VEPL
MSMEG_2968|M.smegmatis_MC2_155 MELMNTTTVVAAGTGRAVV-LDKGDRVRVIDVEGAQVGDVFAFAAGDPDE
Mvan_0110|M.vanbaalenii_PYR-1 PTSGAPATVEIPAQGGAIVSVACGHQLRLIDVEGTQVADLFAVSIENETE
MAB_4349c|M.abscessus_ATCC_199 -----MTVVEVPGGYGSAMTVDAGSLIKIVNPAGTQVVDFWAHQRADLSE
Mflv_5134|M.gilvum_PYR-GCK PLAEPLLDLRIDAETAASYEVREGQFIQIIDVAGRQCSDFLAFDARGLAD
TH_0713|M.thermoresistible__bu VLGTVILDETVPARAPWSAVVAAGDVLTIVDLAGNQAVDCLLYSAADTSV
. : * : ::: * * * .
MSMEG_2968|M.smegmatis_MC2_155 ----YLSASHTRTVTGRLFPAVGEH--FVTNRRRPILRLVADTSPGVHDM
Mvan_0110|M.vanbaalenii_PYR-1 ----WLSVSVTRAMNWRLFPAVGQS--FFSTGYRALLTFERDDSPGPHDM
MAB_4349c|M.abscessus_ATCC_199 ----HLGLGQCREVLERIYFRTGDT--LISNRYNAMLTVMADDTGILHDT
Mflv_5134|M.gilvum_PYR-GCK GREYGLDATTTRTIGGAAYPRPGLRGKFYDARARPLVEVVRDTVG-RHDT
TH_0713|M.thermoresistible__bu R----YSAPETIRRQGRITLTTGSV--LRADTGDALMTVVADEVG-AHDT
. * : .:: . * **
MSMEG_2968|M.smegmatis_MC2_155 LIAACDRE--RYRLLGAP-EHRSCADNLREALAGIGVGVGVVPQPVNIFM
Mvan_0110|M.vanbaalenii_PYR-1 LAAPCSTE--MYRALGYDGHHRSCSENFRTAASTVDWRPLHVPDPVNFFQ
MAB_4349c|M.abscessus_ATCC_199 LIAPCSRA--MYGFLGLDPDHRSCTSNYHEALP--ERAAADPPQPWNLFM
Mflv_5134|M.gilvum_PYR-GCK FALACTAK--YYADLGYL-GHVNCTDNFNGALARFGVDRRQGWPALNLFY
TH_0713|M.thermoresistible__bu LGGACSKESNTLRYGPHTGAQHGCMENFLLEGSRWGLGARDLASNINWFM
: .* : .* .* . * *
MSMEG_2968|M.smegmatis_MC2_155 NIPVTDGGHLSWLPAVSRAGDAVTFEADMDCVVVVSACPMDLNAINGERV
Mvan_0110|M.vanbaalenii_PYR-1 RTPVDETGVVSALPALSRPGTRSRFAP-----------------------
MAB_4349c|M.abscessus_ATCC_199 TAQVRTDGAIQYARPPMQPGMSVTLKALTDLVIVVSACPDDHYPTNGGDG
Mflv_5134|M.gilvum_PYR-GCK NTAFDAAHQLISDEPWSCAGDYVLFRASADLVCASSACPDDIDPANGWVP
TH_0713|M.thermoresistible__bu NVPVDPDGALGIVDGLSAPGKRVAVRAETDTLVLVSNCPQINNPCNAFHP
. : .* . .
MSMEG_2968|M.smegmatis_MC2_155 TDLALELIPTSKEVNA----------------------------------
Mvan_0110|M.vanbaalenii_PYR-1 -------RPTSM--------------------------------------
MAB_4349c|M.abscessus_ATCC_199 SP-----RPVTVEISGDA--------------------------------
Mflv_5134|M.gilvum_PYR-GCK TDIHVRVYDSSRRFSVAVGHRLTPDSEPVLTKSTAFARRTGALTTDFTEY
TH_0713|M.thermoresistible__bu TPVRMIVTRPEGSV------------------------------------
MSMEG_2968|M.smegmatis_MC2_155 --------------------------------------------------
Mvan_0110|M.vanbaalenii_PYR-1 --------------------------------------------------
MAB_4349c|M.abscessus_ATCC_199 --------------------------------------------------
Mflv_5134|M.gilvum_PYR-GCK NGYWLPNRYANHGPHDEYWACREHVAVMDLSALRKFEVLGPDAEALLQAT
TH_0713|M.thermoresistible__bu --------------------------------------------------
MSMEG_2968|M.smegmatis_MC2_155 --------------------------------------------------
Mvan_0110|M.vanbaalenii_PYR-1 --------------------------------------------------
MAB_4349c|M.abscessus_ATCC_199 --------------------------------------------------
Mflv_5134|M.gilvum_PYR-GCK LTRDIRRLSRGQVVYSAMCSESGGVVDDCTVLRLGDNNFRFIGGDPHGGV
TH_0713|M.thermoresistible__bu --------------------------------------------------
MSMEG_2968|M.smegmatis_MC2_155 --------------------------------------------------
Mvan_0110|M.vanbaalenii_PYR-1 --------------------------------------------------
MAB_4349c|M.abscessus_ATCC_199 --------------------------------------------------
Mflv_5134|M.gilvum_PYR-GCK WLRTQAERLGLHQVWIKDSTDQMHNLAVQGPASRAVLDGLIWTPPGQPAL
TH_0713|M.thermoresistible__bu --------------------------------------------------
MSMEG_2968|M.smegmatis_MC2_155 --------------------------------------------------
Mvan_0110|M.vanbaalenii_PYR-1 --------------------------------------------------
MAB_4349c|M.abscessus_ATCC_199 --------------------------------------------------
Mflv_5134|M.gilvum_PYR-GCK RDLGWFRFLTGRLDGPDGAPLLVSRTGYTGELGYEVWVHPGDAETLWDRL
TH_0713|M.thermoresistible__bu --------------------------------------------------
MSMEG_2968|M.smegmatis_MC2_155 --------------------------------------------------
Mvan_0110|M.vanbaalenii_PYR-1 --------------------------------------------------
MAB_4349c|M.abscessus_ATCC_199 --------------------------------------------------
Mflv_5134|M.gilvum_PYR-GCK WDAGRPHGLTPLGLEALEMVRIEAGLAAGGHEFDDQTDPFEAGIGFTVPL
TH_0713|M.thermoresistible__bu --------------------------------------------------
MSMEG_2968|M.smegmatis_MC2_155 --------------------------------------------------
Mvan_0110|M.vanbaalenii_PYR-1 --------------------------------------------------
MAB_4349c|M.abscessus_ATCC_199 --------------------------------------------------
Mflv_5134|M.gilvum_PYR-GCK KTKTDDFVGRAALVERKAHPQRTLVGLRLDSNETTAHGDCVHLGRTQVGV
TH_0713|M.thermoresistible__bu --------------------------------------------------
MSMEG_2968|M.smegmatis_MC2_155 --------------------------------------------------
Mvan_0110|M.vanbaalenii_PYR-1 --------------------------------------------------
MAB_4349c|M.abscessus_ATCC_199 --------------------------------------------------
Mflv_5134|M.gilvum_PYR-GCK VTSATRSPLLGASIALCRIAVQHSEPGTRVEIGKLDGHLKRIPATVTTIP
TH_0713|M.thermoresistible__bu --------------------------------------------------
MSMEG_2968|M.smegmatis_MC2_155 -----------
Mvan_0110|M.vanbaalenii_PYR-1 -----------
MAB_4349c|M.abscessus_ATCC_199 -----------
Mflv_5134|M.gilvum_PYR-GCK FYDSDKTRPRS
TH_0713|M.thermoresistible__bu -----------