For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VILASSTTTLALMPSFLDPVKLLGQFGTLALLGLLVVIFVESGVLFPVLPGDSLLFVAGMLAAGSAAAAA AEGAPQANFQLWQLLVFIPIAAILGGQVGYWIGRGIGTSMFKPDARFLKQRYLDEAHAFFEKRGPFAIVI ARFVPIVRTLAPITAGAARMSYPIFALYNIVGAVVWGVGITLLGYWLGQFPIIQKLLEPIFILIVLASVA PMFLEWMRRRKAGKTAEGSETPTGA
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. abscessus ATCC 19977 | MAB_4255 | - | - | 100% (235) | hypothetical protein MAB_4255 |
| M. abscessus ATCC 19977 | MAB_4661 | - | 2e-43 | 42.71% (199) | hypothetical protein MAB_4661 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb0371 | - | 3e-48 | 41.23% (228) | transmembrane protein |
| M. gilvum PYR-GCK | Mflv_0237 | - | 3e-92 | 73.99% (223) | hypothetical protein Mflv_0237 |
| M. tuberculosis H37Rv | Rv0364 | - | 2e-48 | 41.67% (228) | transmembrane protein |
| M. leprae Br4923 | MLBr_00287 | - | 2e-47 | 41.33% (225) | hypothetical protein MLBr_00287 |
| M. marinum M | MMAR_0668 | - | 1e-47 | 42.74% (234) | transmembrane protein |
| M. avium 104 | MAV_4785 | - | 3e-50 | 43.67% (229) | membrane protein DedA family protein |
| M. smegmatis MC2 155 | MSMEG_0750 | - | 1e-100 | 75.97% (233) | membrane protein |
| M. thermoresistible (build 8) | TH_1640 | - | 2e-52 | 45.09% (224) | POSSIBLE CONSERVED TRANSMEMBRANE PROTEIN |
| M. ulcerans Agy99 | MUL_0104 | - | 4e-47 | 42.31% (234) | transmembrane protein |
| M. vanbaalenii PYR-1 | Mvan_0668 | - | 1e-97 | 76.21% (227) | hypothetical protein Mvan_0668 |
CLUSTAL 2.0.9 multiple sequence alignment
Mb0371|M.bovis_AF2122/97 --------MSTAVTAMPDILDPMYWLGANGVFGSAVLPGILIIVFIETGL
Rv0364|M.tuberculosis_H37Rv --------MSTAVTAMPDILDPMYWLGANGVFGSAVLPGILIIVFIETGL
MMAR_0668|M.marinum_M --------MNTAEMALPDILDPMYWLGADGIFGSAVLPGILLIVFIETGL
MUL_0104|M.ulcerans_Agy99 --------MNTAEMALPDILDPMYWLGADGIFGSAVLPGILLIVFIETGL
MAV_4785|M.avium_104 --------MSTAVTALPDILDPMYWLGADGVFGSAVLPGILVIVFIETGL
MLBr_00287|M.leprae_Br4923 --------MNTAIVALPPTLDPMFWIGPEGFFAAAMLPATLVIIFVETGL
TH_1640|M.thermoresistible__bu --------MSTTVMAMPGILDPMFWIGPDGLFAAAVLPAILIIVFIETGL
MAB_4255|M.abscessus_ATCC_1997 ---MILASSTTTLALMPSFLDPVKLLG---QFGTLALLGLLVVIFVESGV
MSMEG_0750|M.smegmatis_MC2_155 MIDTALPEVTTNLALMPDFMDPLNLIG---YFGTWALVGILLVVFIESGV
Mflv_0237|M.gilvum_PYR-GCK -------MVVDNLALMPDFLDPINLLS---YFGTWALIGLLVVVFVESGV
Mvan_0668|M.vanbaalenii_PYR-1 -------MVVDNLALMPDFLDPINLLS---YFGTWALIGLLVVVFVESGV
:* :**: :. *.: * . *:::*:*:*:
Mb0371|M.bovis_AF2122/97 LFPLLPGESLLFTGGLLSASPAP----------PVTIGVLAPCVALVAVL
Rv0364|M.tuberculosis_H37Rv LFPLLPGESLLFTGGLLSASPAP----------PVTIGVLAPCVALVAVL
MMAR_0668|M.marinum_M LFPLLPGESLLFTGGLLAASAHP----------PVTIGVLAPAVAVVAVL
MUL_0104|M.ulcerans_Agy99 LLPLLPGESLLFTGGLLAASAHP----------PVTIGVLAPAVAVVAVL
MAV_4785|M.avium_104 LFPLLPGESLLFTGGLLAAHPNP----------PASIWVLAPAVAIVAVL
MLBr_00287|M.leprae_Br4923 LFPLLPGESLLFTGGLLATKG------------TIDIWVLSPSVAVVAVL
TH_1640|M.thermoresistible__bu LFPLLPGDSLLFTGGLLAAGG------------TMNIWLLCITVTIVAIL
MAB_4255|M.abscessus_ATCC_1997 LFPVLPGDSLLFVAGMLAAGSAAAAAAEGAPQANFQLWQLLVFIPIAAIL
MSMEG_0750|M.smegmatis_MC2_155 LFPVLPGDSLLFVAGMLAAGTAAKGTAV---DANFQLWQLLVFIPIAAIL
Mflv_0237|M.gilvum_PYR-GCK LFPILPGDSLLFVAGMLAAGISAQSAEGNVAVVNFQLWQLLVFIPIAAVL
Mvan_0668|M.vanbaalenii_PYR-1 LFPVLPGDSLLFVAGMLAAGTAAASKEGNVANADFQLWQLLVFIPIAAVL
*:*:***:****..*:*:: : * :.:.*:*
Mb0371|M.bovis_AF2122/97 GDQTAYFIGRRIGPALFKKEDSRFFKKHYVTESHAFFEKYGKWTIILARF
Rv0364|M.tuberculosis_H37Rv GDQTAYFIGRRIGPALFKKEDSRFFKKHYVTESHAFFEKYGKWTIILARF
MMAR_0668|M.marinum_M GDQTAYFIGRRIGPALFKKEDSRFFKKHYVTESHAFFEKYGPWTVILARF
MUL_0104|M.ulcerans_Agy99 GDQTAYFIGRRIGPALFKKEDSRFFKKHYVTESHAFFEKYGPWTVILARF
MAV_4785|M.avium_104 GDQTGYFIGRRIGPALFKKEDSRFFKKHYVTESHAFFEKYGSWAVILARF
MLBr_00287|M.leprae_Br4923 GDQIGYLIGRRIGPALFKKENSRFFKQHYVTESHAFFEKHGRWTIILARF
TH_1640|M.thermoresistible__bu GDQCAYYIGRRIGPALFNKEDSRFFKKSYVEQSHEFFEKYGPYTIILARF
MAB_4255|M.abscessus_ATCC_1997 GGQVGYWIGRGIGTSMFKP-DARFLKQRYLDEAHAFFEKRGPFAIVIARF
MSMEG_0750|M.smegmatis_MC2_155 GGQVGYIIGRTIGTSMFKP-EARILKQKYLDEAHEFFEQRGPFAIVIARF
Mflv_0237|M.gilvum_PYR-GCK GAQVGYWIGRNVGTAMFTP-NARFLKQKYLDEAHLFFEQRGPFAIVIARF
Mvan_0668|M.vanbaalenii_PYR-1 GAQVGYWIGRNVGTAMFKP-DARFLKQKYLDEAHLFFEQRGPFAIVVARF
* * .* *** :*.::*. ::*::*: *: ::* ***: * :::::***
Mb0371|M.bovis_AF2122/97 VPIARTFVPVIAGVSYMRYPVFLGFDIVGGVAWGAGVTLAGYFLGSVPFV
Rv0364|M.tuberculosis_H37Rv VPIARTFVPVIAGVSYMRYPVFLGFDIVGGVAWGAGVTLAGYFLGSVPFV
MMAR_0668|M.marinum_M VPFARTFVPVIAGVSYMRYPVFLAFDIVGGISWGAGVTLAGYFLGNVPFV
MUL_0104|M.ulcerans_Agy99 VPFARTFVPVIAGVSYMRYPVFLAFDIVGGISWGAGVTLAGYFLGNVPFV
MAV_4785|M.avium_104 APFVRTFVPVIAGVSYMRYPLFLGFDIVGGIAWGGGATLAGYFLGNVPFV
MLBr_00287|M.leprae_Br4923 LPFMRTFTPVIAGLSYMSYPLYLGFDIVGGILWGGGVTVAGYFLGNVPFV
TH_1640|M.thermoresistible__bu VPIVRTYAPVLAGVSYMRYSVFLTFNAVGGIAWGTGVTLLGYFLGNITFV
MAB_4255|M.abscessus_ATCC_1997 VPIVRTLAPITAGAARMSYPIFALYNIVGAVVWGVGITLLGYWLGQFPII
MSMEG_0750|M.smegmatis_MC2_155 VPIVRTLAPITAGAAKMRYPVFTAFNVLGAIVWGVGLTLLGYWLGQFEII
Mflv_0237|M.gilvum_PYR-GCK VPIVRTLAPITAGAAKMNYAVFTLYNAVGAIVWGVGLTLLGFFLGRIEII
Mvan_0668|M.vanbaalenii_PYR-1 VPIVRTLAPITAGAAKMNYAVFTVYNAVGAVVWGAGLTLLGYWLGRFEVI
*: ** .*: ** : * *.:: :: :*.: ** * *: *::** . .:
Mb0371|M.bovis_AF2122/97 HMNFQLIILALVFVSLLPALVSAARVYRARRNAP--QSDP-DPLVLPE-
Rv0364|M.tuberculosis_H37Rv HMNFQLIILAIVFVSLLPALVSAARVYRARRNAP--QSDP-DPLVLPE-
MMAR_0668|M.marinum_M HHNLEKIILGILIVSLIPAMTAAWRGYRSRRRSPNNESDSSDPVVLPE-
MUL_0104|M.ulcerans_Agy99 HHNLEKIILGILIVSLIPAMTAAWRGYRSRRRSPNNESDSSDPVVLPE-
MAV_4785|M.avium_104 HHNLEKIILGILVVSLMPAFVAAWRGYRGRRRPTRTPERESERLPASE-
MLBr_00287|M.leprae_Br4923 RQNLEKIILGILFVSLLPALIAAWHGYRSQSRTAK------SELALPD-
TH_1640|M.thermoresistible__bu KENLEYMILLIVFLSVLPMIFSVTKGMLERRRARSGPALAAEPLPKQSG
MAB_4255|M.abscessus_ATCC_1997 QKLLEPIFILIVLASVAPMFLEWMRRRKAGKTAEGSETPTGA-------
MSMEG_0750|M.smegmatis_MC2_155 QKLLEPIFILIVVASVAPMFIEWYKRRRAAKRASSTDTATDAASPAS--
Mflv_0237|M.gilvum_PYR-GCK QKLLEPIVIGIVILSVLPIAIEWYKRRKAAKQAGIATPPMEAGEQAG--
Mvan_0668|M.vanbaalenii_PYR-1 QKLLEPIVIGIVLLSVLPMLIEWYRRRKAAKQAGGATEAEPTG------
: :: :.: ::. *: * : .