For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
TDILVLRFADLGIATYASLRVVGEPSRTVTWVVDQRPLETVCTALDAALPEATGSETALTAIARALTVGA LASPEAELQLARALGAELVAPEGWKLLSECVTSPRAVLFVTPSPKLARVPWGQLAMPGPDDYRLMELVDV LMSVPPNIVHAPRHPARWRDRQRGPVALLLDPRIPGQRPDSTLGSVLGRPAAEGALTRHFGELMDNHRVL PVAGTPRELFRRSDTDRDWLGGACAQNPARLLYVGHASAAEGAVGHAARAALHLAEDHPLTAADLMAAQF PIPPRVALLACSSGGDYRFDEATGLAAAMILGGAELVTATLWSLPTTAAYSQFVSYTADPMTDTVIGVDH AHRDEDAGRAVNRWQRAQLRRWRDGDRAASPLHWAAVVSFAVDGAR*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. abscessus ATCC 19977 | MAB_4072c | - | - | 100% (397) | hypothetical protein MAB_4072c |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | - | - | - | - | - |
M. gilvum PYR-GCK | - | - | - | - | - |
M. tuberculosis H37Rv | - | - | - | - | - |
M. leprae Br4923 | - | - | - | - | - |
M. marinum M | MMAR_5246 | - | 1e-136 | 57.24% (449) | hypothetical protein MMAR_5246 |
M. avium 104 | MAV_0375 | - | 1e-132 | 57.08% (452) | hypothetical protein MAV_0375 |
M. smegmatis MC2 155 | MSMEG_3801 | - | 1e-145 | 63.48% (397) | hypothetical protein MSMEG_3801 |
M. thermoresistible (build 8) | - | - | - | - | - |
M. ulcerans Agy99 | - | - | - | - | - |
M. vanbaalenii PYR-1 | Mvan_3335 | - | 1e-127 | 57.92% (404) | hypothetical protein Mvan_3335 |
CLUSTAL 2.0.9 multiple sequence alignment MAB_4072c|M.abscessus_ATCC_199 MTD----ILVLRFADLGIATYASLRVVGEPSRTVTWVVDQRPLETVCTAL MSMEG_3801|M.smegmatis_MC2_155 MTA----TLVLRFADVGVATYATLRVVGEPARTLKWVLEEPALPAVYSAL MMAR_5246|M.marinum_M MNDSDRPTLVLRYADVGITTYASLRVVGQPSRTVNWVVDEPILLAALAEL MAV_0375|M.avium_104 MTESGRLTLVLRYADLGIATYASLRIVGQPERTVAWVVEEPLLLAALQEL Mvan_3335|M.vanbaalenii_PYR-1 MTD-AAATLVLRYADVGVATYAGLRVVGQPDSTVTWVIEEPALAEALGLL *. ****:**:*::*** **:**:* *: **::: * . * MAB_4072c|M.abscessus_ATCC_199 DAALPEATGSETALTAIARALTVGALASPEAELQLARALGAELVAPEGWK MSMEG_3801|M.smegmatis_MC2_155 DDALPDPRGGETVAAAVERSLTAGPFADPKRELKFAKELGSHLIPKPAWN MMAR_5246|M.marinum_M TDALPEPHGNEDRREAIERALCRGPFATRDSELTVAFILGVLLIGTPGWQ MAV_0375|M.avium_104 AAALPEPHDAENRRAAIGRALSTGAFAAPDTELTLAYILGVLLIGSAGWQ Mvan_3335|M.vanbaalenii_PYR-1 ADALPDPRPSENVREALERAFTAGSFATATAEQQFADILGRHLISAAGWD ***:. * *: *:: *.:* * .* ** *: .*. MAB_4072c|M.abscessus_ATCC_199 LLSECVTSPRAVLFVTPSPKLARVPWGQLAMP--GP-------------- MSMEG_3801|M.smegmatis_MC2_155 LLIDCVSAPRATLFVTPSPKLARVPWGQLAMP--GL-------------- MMAR_5246|M.marinum_M LLTECAASPRPVLFISPSARLARVPWGLLALPTAGPTREELVRARQEAIT MAV_0375|M.avium_104 LLTECVSSPRAVLFVSPSARLARVPWGLLAIPKSGPSKEELVRARQDAIT Mvan_3335|M.vanbaalenii_PYR-1 LITRHSARQYPALFVAPTARLAQVPWSLLAIP--GD-------------- *: : ..**::*:.:**:***. **:* * MAB_4072c|M.abscessus_ATCC_199 --------------------DDYRLMELVDVLMSVPPNIVHAPRHPARWR MSMEG_3801|M.smegmatis_MC2_155 --------------------HKFRLMELVDVLMAVPPNIVHAPRRSVSWT MMAR_5246|M.marinum_M ASGRAAARIPWQLADITEYTDGYRLMELVDILLAVPQNIVHSARVPARWA MAV_0375|M.avium_104 AAGRAAAQIPWRLGDLAALTDGHRLMELVEVLMAVPPNIVHAPRTATEWD Mvan_3335|M.vanbaalenii_PYR-1 --------------------DPRRLLEFADILVAAPPNIANAARTPAQWD . **:*:.::*::.* **.::.* .. * MAB_4072c|M.abscessus_ATCC_199 DRQRGPV-ALLLDPRIPGQRPDSTLGSVLGRPAAEGALTRHFGELMDNHR MSMEG_3801|M.smegmatis_MC2_155 TRRDNPA-LLVLDPRIPGQRPDSALGSVLGRPTPGTPLSRHFATAVAQRQ MMAR_5246|M.marinum_M ARKDGPP-ILLLDPRVPGQRPDSALGSVLGRPSEETPLARHFAELMRRRP MAV_0375|M.avium_104 ARRDGPP-LLVLDPRVPGQRPDSALGSVLGRPSPDTPVGRHFAELVRRRP Mvan_3335|M.vanbaalenii_PYR-1 ERRDNRARLLILDPRVPGQRPDSALGSVLGRPDPDAALTRHFAELRARCE *: . *:****:*******:******** .: ***. . MAB_4072c|M.abscessus_ATCC_199 VLPVAGTPRELFRRSDTDRDWLGGACAQNPARLLYVGHASAAEGAVG--- MSMEG_3801|M.smegmatis_MC2_155 VLPRVDGPVDLFRRPDADRGWLARACEHEPSRMLYVGHASAAEGDT---- MMAR_5246|M.marinum_M VLPAVDSPSELFRRRDADRDWLSKLLMQQPSRLLYVGHASSADSE---GG MAV_0375|M.avium_104 VLPRVDAVVDLFRRRDADRRWLAGLLARSPCRLLYVGHASSADDDHRHGG Mvan_3335|M.vanbaalenii_PYR-1 VLPDVASTVELFRSAHADRGWLAAQLTREPSRLLFVGHATAADGDVG--- *** . :*** .:** **. :.*.*:*:****::*:. MAB_4072c|M.abscessus_ATCC_199 HAARAALHLAE-------------DHPLTAADLMAAQFPIPPRVALLACS MSMEG_3801|M.smegmatis_MC2_155 -ADRAALHLAE-------------PEPLSAADVIAQALAVPPRVALLACA MMAR_5246|M.marinum_M HADHAALHLACGAAIPGDAPAIGDHRPLTASDLMALRMSMPPRVALLACA MAV_0375|M.avium_104 RADRAALHLADPAAVPGDANAIGDHRPLTASDLMALRLPMPPRVALLACG Mvan_3335|M.vanbaalenii_PYR-1 HADRAALHLAD-------------EQPLTAADLMTAQLAIPPRAALLACS * :****** .**:*:*::: :.:***.*****. MAB_4072c|M.abscessus_ATCC_199 SGGDYRFDEATGLAAAMILGGAELVTATLWSLPTTAAYSQFVSYT----- MSMEG_3801|M.smegmatis_MC2_155 SGGDYRFDEATGLVAAMVLGGAQLVTATLWPLPTSAGYRTFTADD----- MMAR_5246|M.marinum_M SGGDYQFDEATGLVAATILGGAQLVTATLWSLPTTAAYRQFVAEDGDPAD MAV_0375|M.avium_104 SGGDYQFDEATGLVAAMILNGAQLVTATLWSLPTTAAYRQFAMPARGSPE Mvan_3335|M.vanbaalenii_PYR-1 SGGDYRFDEATGLVAALILGGALVVTATLWSLPTAAGYRQFCPAADAS-- *****:*******.** :*.** :******.***:*.* * MAB_4072c|M.abscessus_ATCC_199 --ADPMTDTVIGVDHAHRD-EDAGRAVNRWQRAQLRRWRDGDRAASPLHW MSMEG_3801|M.smegmatis_MC2_155 --ADPMADTVIGVDLAHNQ-EQAGIAVNQWQRAQMRRWREGEVTASPLYW MMAR_5246|M.marinum_M PMTDPMTEIVAAIDSAHET-DEAGCAVNRWQRAQMRRWRDGEASASPLYW MAV_0375|M.avium_104 -SVDPMADLVSAVDTAHDAPADAGCALNRWQRAQMRRWRDGDRVASPLYW Mvan_3335|M.vanbaalenii_PYR-1 --HDPMAAVVIAVDTAHEA-QHAGRAVNAWQRAQLTRWRAGDDAAAPLYW ***: * .:* ** .** *:* *****: *** *: *:**:* MAB_4072c|M.abscessus_ATCC_199 AAVVSFAVDGAR MSMEG_3801|M.smegmatis_MC2_155 ASLATFAVDGAR MMAR_5246|M.marinum_M GAVVSFAVDGAR MAV_0375|M.avium_104 AALATFTVDGAR Mvan_3335|M.vanbaalenii_PYR-1 AALVTFAVDGAR .::.:*:*****