For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
LAPTCPIPVADDSAFESAAIVLRTSHTFDAPVGQVWAALDSDHAWSWLPFGCGVRYDEPDRRAGMEREMG TVSAPWRFLWIQRERFWRYDPPHRITYSAVAGTWPLLKLWAEDYVLTGTPDGCVLEWTVAITPRFVSWMP LRWLQPLLRAVFTWGMRPGLRSLIELLDGPGRTPGNR*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. abscessus ATCC 19977 | MAB_4038c | - | - | 100% (178) | hypothetical protein MAB_4038c |
M. abscessus ATCC 19977 | MAB_4016c | - | 1e-17 | 30.90% (178) | hypothetical protein MAB_4016c |
M. abscessus ATCC 19977 | MAB_4424 | - | 3e-09 | 34.75% (141) | hypothetical protein MAB_4424 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | - | - | - | - | - |
M. gilvum PYR-GCK | - | - | - | - | - |
M. tuberculosis H37Rv | - | - | - | - | - |
M. leprae Br4923 | - | - | - | - | - |
M. marinum M | - | - | - | - | - |
M. avium 104 | - | - | - | - | - |
M. smegmatis MC2 155 | MSMEG_6207 | - | 1e-06 | 27.44% (164) | hypothetical protein MSMEG_6207 |
M. thermoresistible (build 8) | - | - | - | - | - |
M. ulcerans Agy99 | MUL_1741 | - | 9e-05 | 26.03% (146) | hypothetical protein MUL_1741 |
M. vanbaalenii PYR-1 | Mvan_2251 | - | 1e-09 | 30.34% (145) | hypothetical protein Mvan_2251 |
CLUSTAL 2.0.9 multiple sequence alignment MSMEG_6207|M.smegmatis_MC2_155 ----MPR-FALEPADEAFFG----SAPHVFTYRKQFAAPPERVWESLTSD Mvan_2251|M.vanbaalenii_PYR-1 MLHGMTRWFALESADAGFFD----TAPHVFRYEKHYDATPAQVWESLQSD MUL_1741|M.ulcerans_Agy99 -------MFPCERVDLSFVDPDSGQAPFLYRNSVDLAITPEQLFEVLSDA MAB_4038c|M.abscessus_ATCC_199 ---MLAPTCPIPVADDSAFE----SAAIVLRTSHTFDAPVGQVWAALDSD . .* . . *. : . ::: * . MSMEG_6207|M.smegmatis_MC2_155 ESLAAWGSTVKFVNWTSPRPFGVGTTREVALSPG----IVRVDETFFRWE Mvan_2251|M.vanbaalenii_PYR-1 ESLSAWGKTVGSLTWTSPRPFGVGTTREVGTGP------TRVHERFYSWD MUL_1741|M.ulcerans_Agy99 ESWPSWAPVITKVTWTSPPPFRIGTTRTVEMRGG-----LVGNEEFIAWE MAB_4038c|M.abscessus_ATCC_199 HAWS-WLPFGCGVRYDEPD-RRAGMEREMGTVSAPWRFLWIQRERFWRYD .: . * : : .* * * : * * :: MSMEG_6207|M.smegmatis_MC2_155 DGVRYSFYVDHASVPSLRRFAEDYLVEPLGEGRAQFTWIVAIEARPAFAV Mvan_2251|M.vanbaalenii_PYR-1 EGSGYAFYVYEANVPIFRRFAEDYRVEPEGTG-TRFTWLVAIEPAGVMRW MUL_1741|M.ulcerans_Agy99 PFSHMAFRFNECSTQAVAAFAEDYRVEAIPGG-CRLTWTMAQKPAGPARL MAB_4038c|M.abscessus_ATCC_199 PPHRITYSAVAGTWPLLKLWAEDYVLTGTPDG-CVLEWTVAITPRFVSWM :: . . :**** : * : * :* . MSMEG_6207|M.smegmatis_MC2_155 PFKAFAPVLKAAFGRLATDGEKYFRERA---------- Mvan_2251|M.vanbaalenii_PYR-1 PFKLLAPVVKSGFGRMAADGERYFAAR----------- MUL_1741|M.ulcerans_Agy99 GMMLFGPLLNLGLRHFLRKLRSYTDARFEVPQQR---- MAB_4038c|M.abscessus_ATCC_199 PLRWLQPLLRAVFTWGMRPGLRSLIELLDGPGRTPGNR : : *::. :