For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MPRFALEPADEAFFGSAPHVFTYRKQFAAPPERVWESLTSDESLAAWGSTVKFVNWTSPRPFGVGTTREV ALSPGIVRVDETFFRWEDGVRYSFYVDHASVPSLRRFAEDYLVEPLGEGRAQFTWIVAIEARPAFAVPFK AFAPVLKAAFGRLATDGEKYFRERA
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. smegmatis MC2 155 | MSMEG_6207 | - | - | 100% (165) | hypothetical protein MSMEG_6207 |
M. smegmatis MC2 155 | MSMEG_3001 | - | 3e-14 | 31.01% (158) | hypothetical protein MSMEG_3001 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2604 | - | 1e-19 | 35.95% (153) | hypothetical protein Mb2604 |
M. gilvum PYR-GCK | Mflv_3786 | - | 9e-19 | 40.68% (118) | hypothetical protein Mflv_3786 |
M. tuberculosis H37Rv | Rv2574 | - | 1e-19 | 35.95% (153) | hypothetical protein Rv2574 |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_3139c | - | 1e-18 | 34.15% (164) | hypothetical protein MAB_3139c |
M. marinum M | MMAR_2156 | - | 5e-17 | 33.33% (153) | hypothetical protein MMAR_2156 |
M. avium 104 | MAV_3449 | - | 3e-17 | 33.78% (148) | hypothetical protein MAV_3449 |
M. thermoresistible (build 8) | - | - | - | - | - |
M. ulcerans Agy99 | MUL_1741 | - | 5e-17 | 33.33% (147) | hypothetical protein MUL_1741 |
M. vanbaalenii PYR-1 | Mvan_2251 | - | 9e-52 | 60.25% (161) | hypothetical protein Mvan_2251 |
CLUSTAL 2.0.9 multiple sequence alignment MSMEG_6207|M.smegmatis_MC2_155 ----MPR-FALEPADEAFFGS----APHVFTYRKQFAAPPERVWESLTSD Mvan_2251|M.vanbaalenii_PYR-1 MLHGMTRWFALESADAGFFDT----APHVFRYEKHYDATPAQVWESLQSD MMAR_2156|M.marinum_M -------MFPCERVDLSFVDPDSGQAPFLYRNSVDLAITPEQLFEVLSDA MUL_1741|M.ulcerans_Agy99 -------MFPCERVDLSFVDPDSGQAPFLYRNSVDLAITPEQLFEVLSDA MAV_3449|M.avium_104 -------MFDCERVGLDFIDS----APVVFRNSVDLAITPEQLFEVLSDA Mb2604|M.bovis_AF2122/97 -------MYPCERVGLSFTET----APYLFRNTVDLAITPEQLFEVLADP Rv2574|M.tuberculosis_H37Rv -------MYPCERVGLSFTET----APYLFRNTVDLAITPEQLFEVLADP Mflv_3786|M.gilvum_PYR-GCK -------MHSCERVGLDFIDS----APYRFVSTVDLAITPEQLFEVLADE MAB_3139c|M.abscessus_ATCC_199 ---MVMPSFKLEPLVESDFNT----SDFVYTFSTPLPKDAATVWAELNG- . * . : : . :: * . MSMEG_6207|M.smegmatis_MC2_155 ESLAAWGSTVKFVNWTSPRPFGVGTTREVALSPGIVRVDETFFRWEDGV- Mvan_2251|M.vanbaalenii_PYR-1 ESLSAWGKTVGSLTWTSPRPFGVGTTREVGTGP--TRVHERFYSWDEGS- MMAR_2156|M.marinum_M ESWPSWAPVITKVTWTSPPPFRVGTTRTVEMRGG-LVGNEEFIAWEPFS- MUL_1741|M.ulcerans_Agy99 ESWPSWAPVITKVTWTSPPPFRIGTTRTVEMRGG-LVGNEEFIAWEPFS- MAV_3449|M.avium_104 AAWPRWATVITKVTWTSPEPRGVGTTRVVEMRGG-IVGNEEFLAWEPFT- Mb2604|M.bovis_AF2122/97 QAWPRWATVITKVTWTSPEPFGAGTTRIVEMRGG-IVGDEEFISWEPFT- Rv2574|M.tuberculosis_H37Rv QAWPRWATVITKVTWTSPEPFGAGTTRIVEMRGG-IVGDEEFISWEPFT- Mflv_3786|M.gilvum_PYR-GCK TSWPHWATVITDVTWTTPEPRGVGTTRTVQMRGG-ITGDEVFLAWEPFS- MAB_3139c|M.abscessus_ATCC_199 ESPLHWCKAINQIGWTSPEPRGVGSTRTAKLALPGAAVNERFIVWEESPE : * .: : **:* * *:** . .* * *: MSMEG_6207|M.smegmatis_MC2_155 --RYSFYVDHASVPSLRRFAEDYLVEPLGEGRAQFTWIVAIEARPAF-AV Mvan_2251|M.vanbaalenii_PYR-1 --GYAFYVYEANVPIFRRFAEDYRVEPEGTG-TRFTWLVAIEPAGVM-RW MMAR_2156|M.marinum_M --HMAFRFNECSTQAVAAFAEDYRVEVIPGG-CRLTWTMAQKPAGPA-RL MUL_1741|M.ulcerans_Agy99 --HMAFRFNECSTQAVAAFAEDYRVEAIPGG-CRLTWTMAQKPAGPA-RL MAV_3449|M.avium_104 --HMAFRFNECSTRSVAAFAEDYRVQVIPGG-CRLTWTMAQKPAGPA-KL Mb2604|M.bovis_AF2122/97 --RMAFRFNECSTRAVGAFAEDYRVQAIPGG-CRLTWTMAQKLAGPA-RP Rv2574|M.tuberculosis_H37Rv --RMAFRFNECSTRAVGAFAEDYRVQAIPGG-CRLTWTMAQKLAGPA-RP Mflv_3786|M.gilvum_PYR-GCK --RMAFRFNAASTRSISAFAEDYRVVPTQNG-CHLTWIMALQPNGVAGRA MAB_3139c|M.abscessus_ATCC_199 RYRNAFTVETATFPGTKRFGELYEVVGTATG-SLFTWSFFIEPSLGF--- :* . .. *.* * * * :** . : MSMEG_6207|M.smegmatis_MC2_155 PFKAFAPVLKAAFGRLATDGEKYFRERA------ Mvan_2251|M.vanbaalenii_PYR-1 PFKLLAPVVKSGFGRMAADGERYFAAR------- MMAR_2156|M.marinum_M GMMLFGPLLNLGLRRFLRKLRSYTDARFEVPQQR MUL_1741|M.ulcerans_Agy99 GMMLFGPLLNLGLRHFLRKLRSYTDARFEVPQQR MAV_3449|M.avium_104 AMAVVGPLLNLALRRFLRNLRSYTDS-LATRQP- Mb2604|M.bovis_AF2122/97 ALFVFRPLLNLALRRFLRNLRRYTDARFAAAQQS Rv2574|M.tuberculosis_H37Rv ALFVFRPLLNLALRRFLRNLRRYTDARFAAAQQS Mflv_3786|M.gilvum_PYR-GCK GLFLGRPVMARMFQKFLHNLRDYTDERFGG---- MAB_3139c|M.abscessus_ATCC_199 -TRHLKPVIRRGLSGLITDTQKHFA--------- *:: : : . . :