For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. abscessus ATCC 19977 MAB_4003c (-)

annotation: putative UDP-glucose 4-epimerase GalE1
coordinates: 4047604 - 4048668
length: 354

SAGESNLHYPRVVLVTGASRFLGGYLAARLVQNPMINRVIAVDAVAPSKDLLRRMGRAEFVRADIRNPFI
AKVIRNGEVDTVVHTASASYSPRSGGRAALKELNVMGAMQLFAACQKAPTVQRVVVKSTAQVYGASARDP
VMFTEEMSARRPPADGFARDSIDIESYARGLGRRRPDVAVTILRLANLIGPGMDTALARYLAGPVVPTML
GRDARLQLLHEQDALGALERATMAGKAGTFNIAADGMMMMSQAVRRSGQLGIPVPSFAVAAIASFTKGTR
YTELSSEQRDWLAYGRAMDNTRMKTELGYQPKWTTIGAFGDYVRGRGITPVIEPEWVRSLGDRAVAFAQK
ISS*
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. abscessus ATCC 19977MAB_4003c--100% (354)putative UDP-glucose 4-epimerase GalE1
M. abscessus ATCC 19977MAB_0503-2e-0525.13% (195) UDP-glucose 4-epimerase GalE1

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb0513galE21e-15072.88% (354) UDP-glucose 4-epimerase
M. gilvum PYR-GCKMflv_0072-1e-15072.86% (350) NAD-dependent epimerase/dehydratase
M. tuberculosis H37RvRv0501galE21e-15072.88% (354) UDP-glucose 4-epimerase
M. leprae Br4923MLBr_02428-1e-14372.46% (345) putative glucose epimerase/dehydratase
M. marinum MMMAR_0829galE21e-14971.75% (354) UDP-glucose 4-epimerase GalE2
M. avium 104MAV_4649-1e-15274.21% (349) NAD dependent epimerase/dehydratase family protein
M. smegmatis MC2 155MSMEG_0946-1e-15076.40% (339) NAD dependent epimerase/dehydratase family protein
M. thermoresistible (build 8)TH_0954galE11e-14070.67% (341) POSSIBLE UDP-GLUCOSE 4-EPIMERASE GALE2 (GALACTOWALDENASE)
M. ulcerans Agy99MUL_4573galE21e-14971.75% (354) UDP-glucose 4-epimerase GalE2
M. vanbaalenii PYR-1Mvan_0840-1e-15575.65% (345) NAD-dependent epimerase/dehydratase

CLUSTAL 2.0.9 multiple sequence alignment


Mb0513|M.bovis_AF2122/97            MSSSNGRGG-AGGVGGSS-EHPQYPKVVLVTGACRFLGGYLTARLAQNPL
Rv0501|M.tuberculosis_H37Rv         MSSSNGRGG-AGGVGGSS-EHPQYPKVVLVTGACRFLGGYLTARLAQNPL
MMAR_0829|M.marinum_M               MNSSNGQGGGAGGIGGGG-DSVHHPKVVLVTGACRFLGGYLTARLAQNPL
MUL_4573|M.ulcerans_Agy99           MNSSNGQGGGAGGIGGGG-DSVHHPKVVLVTGACRFLGGYLTARLAQNPL
MLBr_02428|M.leprae_Br4923          MDSSSGQDG--GGTGG----VVPYPKVVLVTGACRFLGGYLTARLAQNPL
MAV_4649|M.avium_104                MDPSNGHNSGPDDTAG---NTVHYPKIVLVTGACRFLGGYLTARLAQNPM
Mflv_0072|M.gilvum_PYR-GCK          MDSEGRSG--TGPEGSDAREGLDYPKVVLVTGACRFLGGYLTARLAQNPL
Mvan_0840|M.vanbaalenii_PYR-1       MDSEARSGGRSGADGSDTRDDLNYPKVVLVTGACRFLGGYLTARLAQNPL
MSMEG_0946|M.smegmatis_MC2_155      --------------------------MVLVTGACRFLGGYLTARLAQNPS
TH_0954|M.thermoresistible__bu      VDA---------ADGTGTGDAAQQPKVVLVTGACRFLGGYLTARLAQNPA
MAB_4003c|M.abscessus_ATCC_199      MSAGE--------------SNLHYPRVVLVTGASRFLGGYLAARLVQNPM
                                                              :******.*******:***.*** 

Mb0513|M.bovis_AF2122/97            INRVIAVDAIAPSKDMLRRMGRAEFVRADIRNPFIAKVIRNGEVDTVVHA
Rv0501|M.tuberculosis_H37Rv         INRVIAVDAIAPSKDMLRRMGRAEFVRADIRNPFIAKVIRNGEVDTVVHA
MMAR_0829|M.marinum_M               ISSVIAVDAIAPSKDMLRRMGRAEFVRADIRNPFIAKVIRNGDVDTVVHA
MUL_4573|M.ulcerans_Agy99           ISSVIAVDAIAPSKDMLRRMGRAEFVRADIRNPFIAKVIRNGDVDTVVHA
MLBr_02428|M.leprae_Br4923          INAVIAVDAIAPSKDMLRRMGHAEFVRADIRNPFIAKVIRNGEVDTVVHA
MAV_4649|M.avium_104                IKGVIAVDAIAPSKDMLRRMGRAEFVRADIRNPFIAKVIRNGDVDTVVHA
Mflv_0072|M.gilvum_PYR-GCK          INHVIAVDAVAPSKDLLRRMGRAEFVRADIRNPFIAKVIRNGEVDTVVHA
Mvan_0840|M.vanbaalenii_PYR-1       INHVIAVDAIAPSKDLLRRMGRAEFVRADIRNPFIAKVIRNGDVDTVVHA
MSMEG_0946|M.smegmatis_MC2_155      IDHVIAVDAITPSKDLLRRMGRAEFVRADIRNPFIAKVIRNGNVDTVVHA
TH_0954|M.thermoresistible__bu      IDHVIAVDVATPSKDMLRRMGRAEFIRADIRNPFIAKVIRNGNVDTVVHA
MAB_4003c|M.abscessus_ATCC_199      INRVIAVDAVAPSKDLLRRMGRAEFVRADIRNPFIAKVIRNGEVDTVVHT
                                    *. *****. :****:*****:***:****************:******:

Mb0513|M.bovis_AF2122/97            AAASYAPRSGGSAALKELNVMGAMQLFAACQKAPSVRRVVLKSTSEVYGS
Rv0501|M.tuberculosis_H37Rv         AAASYAPRSGGSAALKELNVMGAMQLFAACQKAPSVRRVVLKSTSEVYGS
MMAR_0829|M.marinum_M               AAASYAPRSGGSAALKELNVMGAMQLFAACQKAPSVRRVVLKSTSEVYGS
MUL_4573|M.ulcerans_Agy99           AAASYAPRSGGSAALKELNVMGAMQLFAACQKAPSVRRVVLKSTSEVYGS
MLBr_02428|M.leprae_Br4923          DAASYAPRSCGSAALKELNVMGAMQLFAACQKAPTVRRVVLKSTSAVYGS
MAV_4649|M.avium_104                AAASYAPRSGGTAALKEINVMGAMQLFAACQKAPSVRRVVLKSTSEVYGS
Mflv_0072|M.gilvum_PYR-GCK          AAASYAPRAGGRATLKEINVMGAIQLFAACQKAPSVRRVILKSTSEVYGS
Mvan_0840|M.vanbaalenii_PYR-1       AAASYAPRSGGRATLKELNVMGAIQLFAACQKAPSVRRVILKSTSEVYGS
MSMEG_0946|M.smegmatis_MC2_155      AAASYAPRSGGRATLKELNVMGAIQLFAACQKTPSVRRVILKSTSEVYGS
TH_0954|M.thermoresistible__bu      AAASYARGSGARATQKEFNVMGAIQLFAACQKAPSVRRVVLKSTSDVYGA
MAB_4003c|M.abscessus_ATCC_199      ASASYSPRSGGRAALKELNVMGAMQLFAACQKAPTVQRVVVKSTAQVYGA
                                     :***:  : . *: **:*****:********:*:*:**::***: ***:

Mb0513|M.bovis_AF2122/97            SPHDPVMFTEDSSSRRPFSQGFPKDSLDIEGYVRALGRRRPDIAVTILRL
Rv0501|M.tuberculosis_H37Rv         SPHDPVMFTEDSSSRRPFSQGFPKDSLDIEGYVRALGRRRPDIAVTILRL
MMAR_0829|M.marinum_M               SPHDPVVFTEDSSSRRPFREGFAKDSLDIEGYARGLGRRRPDIAVTILRL
MUL_4573|M.ulcerans_Agy99           SPHDPVVFTEDSSSRRPFREGFAKDSLDIEGYARGLGRRRPDIAVTILRL
MLBr_02428|M.leprae_Br4923          GSRDPVMFTEDSSSWRSFREGFAKDSLDIEGYARGLGRRRSDIAVTILRL
MAV_4649|M.avium_104                SAHDPVMFTEDSTSRRPFRAGFAKDSLDIEAYARGLGRRRPDIAVTILRL
Mflv_0072|M.gilvum_PYR-GCK          SSRDPVLFSESSSRRRPPGEGFARDSIDIEGYARGMGRRRPDIAVTILRL
Mvan_0840|M.vanbaalenii_PYR-1       SSRDPVLFSESSSRRRPPGEGFARDSIDIEGYARGLGRRRPDIAVTILRL
MSMEG_0946|M.smegmatis_MC2_155      SSRDPVMFTEESSARRPPRDGFARDSIDIEGYARGLARRRPDIAVTILRL
TH_0954|M.thermoresistible__bu      HPRDPVVFSEECDARKPPGDGFARDSIDIEGYARGLARRRPDIAVTILRL
MAB_4003c|M.abscessus_ATCC_199      SARDPVMFTEEMSARRPPADGFARDSIDIESYARGLGRRRPDVAVTILRL
                                     .:***:*:*.    :.   **.:**:***.*.*.:.***.*:*******

Mb0513|M.bovis_AF2122/97            ANMIGPAMDTTLSRYLAGPLVPTIFGRDARLQLLHEQDALGALERAAMAG
Rv0501|M.tuberculosis_H37Rv         ANMIGPAMDTTLSRYLAGPLVPTIFGRDARLQLLHEQDALGALERAAMAG
MMAR_0829|M.marinum_M               ANMIGPAMDTTLSRYLAGPGVPTMFGRDARLQLLHEQDALGALERAALSG
MUL_4573|M.ulcerans_Agy99           ANMIGPAMDTTLSRYLAGPGVPTMFGRDARLQLLHEQDALGALERAALSG
MLBr_02428|M.leprae_Br4923          ADMIGPAMDTTLSRYLAGPLVPTMCGRDARLQLLHEQDALGALECAAMTG
MAV_4649|M.avium_104                ANMIGPAMDTTLSRYLAGPLVPTILGRDARLQLLHEQDALGALERAAMAG
Mflv_0072|M.gilvum_PYR-GCK          ANMIGPATDTALSRYLAGPVVPTVIGHDPRLQLLHEQDALGALERATMAG
Mvan_0840|M.vanbaalenii_PYR-1       ANMIGPAMDTALSRYLAGPVVPTIIGHDPRLQLLHEQDALGVLERATMAG
MSMEG_0946|M.smegmatis_MC2_155      ANMIGPAMDTALSRYLAGPVVPCVVGHDARLQLLHEQDALGALEHATVAG
TH_0954|M.thermoresistible__bu      ANLIGPAINSPLTRFLARPVVTTVLGRDPRLQLLHEQDALGALEHATLSG
MAB_4003c|M.abscessus_ATCC_199      ANLIGPGMDTALARYLAGPVVPTMLGRDARLQLLHEQDALGALERATMAG
                                    *::***. ::.*:*:** * *. : *:*.************.** *:::*

Mb0513|M.bovis_AF2122/97            KAGTFNIGADGILMLSQAIRRAGRIPVPVPGFGVWALDSLRRANHYTELN
Rv0501|M.tuberculosis_H37Rv         KAGTFNIGADGILMLSQAIRRAGRIPVPVPGFGVWALDSLRRANHYTELN
MMAR_0829|M.marinum_M               KGGTYNIGADGIIMLSQAIRRAGRIPLPVPGFGVWALDSLRRANRYTEIN
MUL_4573|M.ulcerans_Agy99           KGGTYNIGADGIIMLSQAIRRAGRIPLPVPGFGVWALDSLRRVNRYTEIN
MLBr_02428|M.leprae_Br4923          KAGTFNIGASGIMMLSQAIRRAGRIAVPIPSFGVWALDLLRWVNRYTEIT
MAV_4649|M.avium_104                KAGTFNIGADGIIMLSQAIRRAGRIPLPVPGFGVWALDSLRRANRYNEIS
Mflv_0072|M.gilvum_PYR-GCK          RSGAFNIGASGIITMSQAIRRAGRLALPVPRSALVAVDSLWRATRNTELD
Mvan_0840|M.vanbaalenii_PYR-1       KAGTFNVGASGVIMMSQAIRRSGRLALPVPRSVLVAVDSLWRATRNTELD
MSMEG_0946|M.smegmatis_MC2_155      KAGTFNIGADGIIMMSQALRRSGRIRLPVPRSALAAVDSLNRATRYSEVD
TH_0954|M.thermoresistible__bu      KPGTFNIAAPGIIMMSQAIRRAGRIALPVPRSALSVVDSVVRATRSTELD
MAB_4003c|M.abscessus_ATCC_199      KAGTFNIAADGMMMMSQAVRRSGQLGIPVPSFAVAAIASFTKGTRYTELS
                                    : *::*:.* *:: :***:**:*:: :*:*   : .:  .   .: .*: 

Mb0513|M.bovis_AF2122/97            REQFAYLSYGRVMDTTRMRVELGYQPKWTTVEAFDDYFRGRGLTPIIDPH
Rv0501|M.tuberculosis_H37Rv         REQFAYLSYGRVMDTTRMRVELGYQPKWTTVEAFDDYFRGRGLTPIIDPH
MMAR_0829|M.marinum_M               REQFAYLSYGRVMDTTRMRSELGYQPKWSTAEAFDDYVRGRGLTPIIDPH
MUL_4573|M.ulcerans_Agy99           REQFAYLSYGRVMDTTRMRSELGYQPKWSTAEAFDDYVRGRGLTPIIDPH
MLBr_02428|M.leprae_Br4923          RDQFEYLSYGRVMDTTRMGSELGYHPKWTTAGAFDDYVRGRGLTPIIDLH
MAV_4649|M.avium_104                RDQFDYLSYGRVMDTSRMRSELGYQPKWTTAEAFDDYVRGRGLTPIIDPD
Mflv_0072|M.gilvum_PYR-GCK          REQLDYLSYGRVMDTSRMRNELGYSPKWTTAEAFDDYVRGRGLTPIIDPR
Mvan_0840|M.vanbaalenii_PYR-1       REQLDYLSYGRVMDTTRMRTELGYTPKWTTAEAFDDYVRGRGLTPIVDPD
MSMEG_0946|M.smegmatis_MC2_155      REQLNYLSYGRVMDTTRMRRDLGYSPKWTTGEAFDDYVRGRGLTPIIDPR
TH_0954|M.thermoresistible__bu      REQLNYLSYGRVMDTTRMREDLGYSPKWTTVEAFDDYVRGRGLTPIVDPR
MAB_4003c|M.abscessus_ATCC_199      SEQRDWLAYGRAMDNTRMKTELGYQPKWTTIGAFGDYVRGRGITPVIEPE
                                     :*  :*:***.**.:**  :*** ***:*  **.**.****:**:::  

Mb0513|M.bovis_AF2122/97            RVRSWEGRAVGLAQRWGSRNPIPWSGLR
Rv0501|M.tuberculosis_H37Rv         RVRSWEGRAVGLAQRWGSRNPIPWSGLR
MMAR_0829|M.marinum_M               RVRSWEGRAIAVAQRWGSRNPIPWGGVR
MUL_4573|M.ulcerans_Agy99           RVRSWEGRAIAVAQRWGSRNPIPWGGVR
MLBr_02428|M.leprae_Br4923          RVRYFEGRAIALAQRWSSRN--------
MAV_4649|M.avium_104                RVRSLESRAIALAQRWGSRNPIPWGGVR
Mflv_0072|M.gilvum_PYR-GCK          WIHAVENRAVAAAQRWGR----------
Mvan_0840|M.vanbaalenii_PYR-1       WIRSVENRAVAAAQRWGR----------
MSMEG_0946|M.smegmatis_MC2_155      WVGSLESRAVALAQRWGR----------
TH_0954|M.thermoresistible__bu      WVRSMESRAVAVAQRWGR----------
MAB_4003c|M.abscessus_ATCC_199      WVRSLGDRAVAFAQKISS----------
                                     :    .**:. **: .