For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MTSAGNPPLQVVIDEVGALSKFAASLADQMRAGSSSLDRDVQSLFGVWRGSAADAYRSGWDEMQDGATKV WNALTDIASTLGSNAAVFHAQETSTASSITSTQAG
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. abscessus ATCC 19977 | MAB_3112 | - | - | 100% (105) | hypothetical protein MAB_3112 |
M. abscessus ATCC 19977 | MAB_4463 | - | 1e-05 | 30.00% (70) | hypothetical protein MAB_4463 |
M. abscessus ATCC 19977 | MAB_4831c | - | 2e-05 | 28.26% (92) | hypothetical protein MAB_4831c |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | - | - | - | - | - |
M. gilvum PYR-GCK | - | - | - | - | - |
M. tuberculosis H37Rv | Rv3905c | esxF | 2e-07 | 29.79% (94) | hypothetical protein Rv3905c |
M. leprae Br4923 | - | - | - | - | - |
M. marinum M | MMAR_5466 | esxF | 8e-07 | 29.41% (85) | EsaT-6 like protein EsxF |
M. avium 104 | MAV_4642 | - | 1e-05 | 27.91% (86) | hypothetical protein MAV_4642 |
M. smegmatis MC2 155 | MSMEG_1872 | - | 3e-08 | 29.47% (95) | hypothetical protein MSMEG_1872 |
M. thermoresistible (build 8) | - | - | - | - | - |
M. ulcerans Agy99 | MUL_5055 | esxF | 3e-07 | 30.59% (85) | EsaT-6 like protein EsxF |
M. vanbaalenii PYR-1 | Mvan_1120 | - | 5e-07 | 34.12% (85) | Fis family transcriptional regulator |
CLUSTAL 2.0.9 multiple sequence alignment MMAR_5466|M.marinum_M --MDADGTLSANAAAMLGFAESLRGAAEHLQGELAELEGQVGDMLG-GWR MUL_5055|M.ulcerans_Agy99 --MDADGTLGANAAAMLGFAESLHGAAEHLQGELAELEGQVGDMLG-GWR Rv3905c|M.tuberculosis_H37Rv --MGADDTLRVEPAVMQGFAASLDGAAEHLAVQLAELDAQVGQMLG-GWR MAV_4642|M.avium_104 ---MSDNTVRVDPVVMQGAAASLSGAAEHLSAQLGQLDDQVGQMLG-GWQ MSMEG_1872|M.smegmatis_MC2_155 ----MGQSLEVVTSELRSASAALADAGQRLQDGLSAVDLSVDQLLGSGWK Mvan_1120|M.vanbaalenii_PYR-1 -----MDHLKVDPDVAFNTSRSVSNDAVELHEQLDSLQHDWDNLSR-GWS MAB_3112|M.abscessus_ATCC_1997 MTSAGNPPLQVVIDEVGALSKFAASLADQMRAGSSSLDRDVQSLFG-VWR : . : . . .: :: . .: * MMAR_5466|M.marinum_M GASGSAFASAWELWRRGAGEVQLGLSMLAESVGQAGAGYQANEAASARAL MUL_5055|M.ulcerans_Agy99 GAAGSAFASAWELWRRGAGEVQFGLSMLAESVGQAGAGYQANEAASARAL Rv3905c|M.tuberculosis_H37Rv GASGSAYGSAWELWHRGAGEVQLGLSMLAAAIAHAGAGYQHNETASAQVL MAV_4642|M.avium_104 GASGSAYAAAWELWHRGAREVQLGLAMLARLVGQAGEAYASNEAGAAQAE MSMEG_1872|M.smegmatis_MC2_155 GGAGSAYSEQWDKWHNGAGQVIRGLQAMSESLKASADSYSATDQQAAGAV Mvan_1120|M.vanbaalenii_PYR-1 GAASSAYSPLWAEWLDGATTLVDTLEELSRKVAAAAAQYVDQDGSAAASI MAB_3112|M.abscessus_ATCC_1997 GSAADAYRSGWDEMQDGATKVWNALTDIASTLGSNAAVFHAQETSTASSI *.:..*: * ** : * :: : . : : :* MMAR_5466|M.marinum_M R---ELGHG----------------------------------------- MUL_5055|M.ulcerans_Agy99 R---ELGHGRSLPGGSRLAVRCGSADGGVWSSRGGHDC------------ Rv3905c|M.tuberculosis_H37Rv R---EVGGG----------------------------------------- MAV_4642|M.avium_104 R---AVRGG----------------------------------------- MSMEG_1872|M.smegmatis_MC2_155 GSSFQPGGGSPAGSAGASSASPAAATSAQQASSAQMDGGTEDLAAMMGLG Mvan_1120|M.vanbaalenii_PYR-1 DS-TAVDLGL---------------------------------------- MAB_3112|M.abscessus_ATCC_1997 T---STQAG----------------------------------------- * MMAR_5466|M.marinum_M -------------------------------------------------- MUL_5055|M.ulcerans_Agy99 -------------------------------------------------- Rv3905c|M.tuberculosis_H37Rv -------------------------------------------------- MAV_4642|M.avium_104 -------------------------------------------------- MSMEG_1872|M.smegmatis_MC2_155 EPAAQLGGQLAEGAAQAAGQLTGGLTQAATAITQGVTGIVQAAQSESGAG Mvan_1120|M.vanbaalenii_PYR-1 -------------------------------------------------- MAB_3112|M.abscessus_ATCC_1997 -------------------------------------------------- MMAR_5466|M.marinum_M -------------------------------------------------- MUL_5055|M.ulcerans_Agy99 -------------------------------------------------- Rv3905c|M.tuberculosis_H37Rv -------------------------------------------------- MAV_4642|M.avium_104 -------------------------------------------------- MSMEG_1872|M.smegmatis_MC2_155 ATPVETGSTTAADPLVPVDEATPDTEDEHTDERDETERQSDEQEAETLEA Mvan_1120|M.vanbaalenii_PYR-1 -------------------------------------------------- MAB_3112|M.abscessus_ATCC_1997 -------------------------------------------------- MMAR_5466|M.marinum_M ------------------------------------------- MUL_5055|M.ulcerans_Agy99 ------------------------------------------- Rv3905c|M.tuberculosis_H37Rv ------------------------------------------- MAV_4642|M.avium_104 ------------------------------------------- MSMEG_1872|M.smegmatis_MC2_155 NGAGGGAGTDSSSVSAPGEMAPPSPSPPTTGNSMRFGRLNDAQ Mvan_1120|M.vanbaalenii_PYR-1 ------------------------------------------- MAB_3112|M.abscessus_ATCC_1997 -------------------------------------------