For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. abscessus ATCC 19977 MAB_2850c (-)

annotation: putative Holliday junction resolvase
coordinates: 2898651 - 2899151
length: 166

PDTAAPTPDRPGPDDPGRGRRLGVDVGTVRIGISSSDPDGILATPVETVSRDAKEDSDFRRIAELVEEMS
VVEVVVGLPRNLREGTGSSARDAAGFARELGERIAPVPVRLVDERFTTTTAQRSLREAGVRSRQQRGIID
QAAAVAILQDWLEQRRRCGSEGDTP*
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. abscessus ATCC 19977MAB_2850c--100% (166)putative Holliday junction resolvase

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb2584c-1e-4762.00% (150) Holliday junction resolvase-like protein
M. gilvum PYR-GCKMflv_3762-5e-5263.80% (163) Holliday junction resolvase YqgF
M. tuberculosis H37RvRv2554c-1e-4762.00% (150) Holliday junction resolvase-like protein
M. leprae Br4923MLBr_00513-1e-4765.33% (150) Holliday junction resolvase-like protein
M. marinum MMMAR_2171-3e-5064.52% (155) hypothetical protein MMAR_2171
M. avium 104MAV_3430-4e-5167.55% (151) Holliday junction resolvase-like protein
M. smegmatis MC2 155MSMEG_3026-7e-5366.23% (151) Holliday junction resolvase-like protein
M. thermoresistible (build 8)TH_0113-2e-5061.63% (172) CONSERVED HYPOTHETICAL PROTEIN
M. ulcerans Agy99MUL_1755-2e-5064.52% (155) Holliday junction resolvase-like protein
M. vanbaalenii PYR-1Mvan_2641-2e-5468.10% (163) Holliday junction resolvase YqgF

CLUSTAL 2.0.9 multiple sequence alignment


Mb2584c|M.bovis_AF2122/97           --MVPAQHRPPDRPGDPA----HDP--GRGRRLGIDVGAARIGVACSDPD
Rv2554c|M.tuberculosis_H37Rv        --MVPAQHRPPDRPGDPA----HDP--GRGRRLGIDVGAARIGVACSDPD
MAV_3430|M.avium_104                --MT--QHRVPDRPGDPD----QDP--GRGRRLGIDVGSVRIGVACSDPD
MMAR_2171|M.marinum_M               --MVAASHRSPDRPGDPEG---LEPGTGRGRRLGIDVGTVRIGVASSDPD
MUL_1755|M.ulcerans_Agy99           --MVAASHRSPDRPGDPEG---LEPGTGRGRRLGIDVGTVRIGVASSDPD
MLBr_00513|M.leprae_Br4923          --MFSSQHRLLYQPSGPDLSKNLDP--ERGRRLGIDVGSVRIGVAFSDPD
TH_0113|M.thermoresistible__bu      --VDDSRERRPDRPGDALQP--PDP--GPGRRLGVDVGKVRIGVAASDPD
Mflv_3762|M.gilvum_PYR-GCK          MPDTDWTSRVPDRPGDPNA--APDP--GRGRRLGIDVGSVRIGVAVSDPD
Mvan_2641|M.vanbaalenii_PYR-1       MPDTDWTSRVPDRPGDPNT--APDP--GRGRRLGVDVGTVRIGVAVSDPD
MSMEG_3026|M.smegmatis_MC2_155      MGTDD---RLPDRPG------ADDP--GRGRRIGIDVGTVRIGVASSDPD
MAB_2850c|M.abscessus_ATCC_199      --MPDTAAPTPDRPGP------DDP--GRGRRLGVDVGTVRIGISSSDPD
                                                :*.        :*    ***:*:*** .***:: ****

Mb2584c|M.bovis_AF2122/97           AILATPVETVRRDRS---GKHLRRLAALAAELEAVEVIVGLPRTLADRIG
Rv2554c|M.tuberculosis_H37Rv        AILATPVETVRRDRS---GKHLRRLAALAAELEAVEVIVGLPRTLADRIG
MAV_3430|M.avium_104                AVLATPVETVRRDRS---GKHLRRLAALVTELGAVEVVVGLPRTLADRTG
MMAR_2171|M.marinum_M               GILATPLETVRRERS---GKHLRRLATLVGETEAVEVIVGLPRTLADRIG
MUL_1755|M.ulcerans_Agy99           GILATPLETVRRERS---GKHLRRLATLVGETEAVEVIVGLPRTLADRIG
MLBr_00513|M.leprae_Br4923          GILATPVETVRRYRS---AKHLRRLAELVVELQVVEVVVGLPWTLTDRTG
TH_0113|M.thermoresistible__bu      GVLATPLETVRRERS---GRHLRRLAALVAELSAVEVVVGLPRTLADRMG
Mflv_3762|M.gilvum_PYR-GCK          AVLATPVETVTRDRR--SGRHLRRLTTLVGEYEAVEVVIGLPRTLGNRAG
Mvan_2641|M.vanbaalenii_PYR-1       AILATPVETVPRDKR--GTKHVRRLAALVDEYQVVEVVVGLPRTLADRAG
MSMEG_3026|M.smegmatis_MC2_155      GILATPVETVARDKRDKTGKHVRRLAALVKEYEAVEVIVGLPRTLGDRAS
MAB_2850c|M.abscessus_ATCC_199      GILATPVETVSRDAK--EDSDFRRIAELVEEMSVVEVVVGLPRNLREGTG
                                    .:****:*** *        ..**:: *. *  .***::*** .* :  .

Mb2584c|M.bovis_AF2122/97           RSAQDAIELAEALARRVSPTPVRLADERLTTVSAQRSLRQAGVRASEQRA
Rv2554c|M.tuberculosis_H37Rv        RSAQDAIELAEALARRVSPTPVRLADERLTTVSAQRSLRQAGVRASEQRA
MAV_3430|M.avium_104                ASALDAIDLADQLARRIAPTPVRLADERLTTVAAQRSLRAAGVRAKEQRA
MMAR_2171|M.marinum_M               SSAQDAIDLADELAARVAPIPVRLADERLTTVSAQRSLREAGVRAKNQRA
MUL_1755|M.ulcerans_Agy99           SSAQDAIDLADELAARVAPIPVRLADERLTTVSAQRSLREAGVRAKNQRA
MLBr_00513|M.leprae_Br4923          SSAKDAIDTAEALARRVAPVPVRLVDERLTTVSAQRLLRAAGVRAKDQRA
TH_0113|M.thermoresistible__bu      PAAQDAIALADELARRIDPVPVRLADERLTTVTAQRSLRAAGVRSRDQRA
Mflv_3762|M.gilvum_PYR-GCK          SSAQDATEVADQLAARIAPVPVRLADERFTTVTAQRELREAGVRARGQKS
Mvan_2641|M.vanbaalenii_PYR-1       SSAQDATEVAEVLAGRIAPVPVRLADERFTTVTAQRALREAGVRARGQRS
MSMEG_3026|M.smegmatis_MC2_155      ASAHDAVDVAEQLARRIAPTPVRLADERLTTVSAQRSLREAGVRARGQKA
MAB_2850c|M.abscessus_ATCC_199      SSARDAAGFARELGERIAPVPVRLVDERFTTTTAQRSLREAGVRSRQQRG
                                     :* **   *  *. *: * ****.***:**.:*** ** ****:  *:.

Mb2584c|M.bovis_AF2122/97           VIDQAAAVAILQSWLDERLAAMAGTQEGSDA----------
Rv2554c|M.tuberculosis_H37Rv        VIDQAAAVAILQSWLDERLAAMAGTQEGSDA----------
MAV_3430|M.avium_104                VIDQAAAVAILQSWLDQRRAAVREAGDG-------------
MMAR_2171|M.marinum_M               VIDQAAAVAILQAWLDQRRTLAGGRADG-------------
MUL_1755|M.ulcerans_Agy99           VIDQAAAVAILQAWLDQRRTLAGGRADG-------------
MLBr_00513|M.leprae_Br4923          VIDQAAAVVILQNWLDQCRAATPARADEPTTGSVAGEVIDG
TH_0113|M.thermoresistible__bu      MIDQVAAVDILQGWLDQRRAALSARGEAGDD----------
Mflv_3762|M.gilvum_PYR-GCK          MIDQAAAVGILQNWLDQRRAALPAHGEVLDD----------
Mvan_2641|M.vanbaalenii_PYR-1       VIDQAAAVGILQNWLDQRRAALPAHGEVLDD----------
MSMEG_3026|M.smegmatis_MC2_155      VIDQVAAVGILQGWLDQRRAALAARREGTDG----------
MAB_2850c|M.abscessus_ATCC_199      IIDQAAAVAILQDWLEQRRRCGSE-GDTP------------
                                    :***.*** *** **::         :