For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
TESTPPPFGTPPPVPPAPGVPYPPPYVDPAAPYGRDPATGAPYSDKSKLVAGLLQLLGLVGFLGFGRIYL GQTLLGVVQLLIGFVTFGIVAVIWAIVDAVLIFGGKVTDKVGRQLRD*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. abscessus ATCC 19977 | MAB_2641c | - | - | 100% (118) | hypothetical protein MAB_2641c |
| M. abscessus ATCC 19977 | MAB_3781 | - | 4e-06 | 29.31% (116) | hypothetical protein MAB_3781 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb1641 | - | 9e-35 | 62.07% (116) | hypothetical protein Mb1641 |
| M. gilvum PYR-GCK | Mflv_3595 | - | 1e-31 | 59.52% (126) | TM2 domain-containing protein |
| M. tuberculosis H37Rv | Rv1615 | - | 9e-35 | 62.07% (116) | hypothetical protein Rv1615 |
| M. leprae Br4923 | - | - | - | - | - |
| M. marinum M | MMAR_2417 | - | 2e-33 | 58.56% (111) | hypothetical protein MMAR_2417 |
| M. avium 104 | MAV_3436 | - | 7e-06 | 47.62% (42) | hypothetical protein MAV_3436 |
| M. smegmatis MC2 155 | MSMEG_3223 | - | 3e-33 | 70.65% (92) | TM2 domain-containing protein |
| M. thermoresistible (build 8) | TH_1095 | - | 1e-33 | 57.50% (120) | Probable hypothetical membrane protein |
| M. ulcerans Agy99 | MUL_1595 | - | 2e-33 | 58.56% (111) | hypothetical protein MUL_1595 |
| M. vanbaalenii PYR-1 | Mvan_2820 | - | 3e-35 | 59.68% (124) | TM2 domain-containing protein |
CLUSTAL 2.0.9 multiple sequence alignment
Mb1641|M.bovis_AF2122/97 MGLRPARVVRPARSGMLKGVTDPLQHGAFEPGWQSAPPGYPPP-YPQYPG
Rv1615|M.tuberculosis_H37Rv MGLRPARVVRPARSGMLKGVTDPLQHGAFEPGWQSAPPGYPPP-YPQYPG
MMAR_2417|M.marinum_M ------MVTDQSWAG---GGAGPGQQ----PGY---PPPFPPPYYPDYSA
MUL_1595|M.ulcerans_Agy99 -------MTDQSWAG---GGAGPGQQ----PGY---PPPFPPPYYPDYSA
MSMEG_3223|M.smegmatis_MC2_155 --------------------------------------------------
TH_1095|M.thermoresistible__bu -------MTESDKPGN-SGADVPPPSAGSPPPYSSPAGQYPPP----PPG
Mflv_3595|M.gilvum_PYR-GCK -------MTEPPFSGNEGADKYPPPPQ--QPGYVPPGSQYVPPPPGAYPP
Mvan_2820|M.vanbaalenii_PYR-1 -------MTEPPFSGNEGGPSYTPPPP--QPGYVPPGPQYAPPPPGAYPP
MAB_2641c|M.abscessus_ATCC_199 -------MTES----------TPPPFG--------TPPPVPPAPGVPYPP
MAV_3436|M.avium_104 -------MSQPPEYPG--TPPEPPPGYGPPPGYGPPPGYGPPPGYGTPPP
Mb1641|M.bovis_AF2122/97 PG----------------SYFDPFAPYGRHPVTGQP--FSDKSK------
Rv1615|M.tuberculosis_H37Rv PG----------------SYFDPFAPYGRHPVTGQP--FSDKSK------
MMAR_2417|M.marinum_M PR----------------SYYDPAAPFGRHPVTGQP--FSDKSK------
MUL_1595|M.ulcerans_Agy99 PR----------------SYYDPAAPFGRHPVTGQP--FSDKSK------
MSMEG_3223|M.smegmatis_MC2_155 ------------------MYGDPTAPYGRHPVTGEP--FSDKSK------
TH_1095|M.thermoresistible__bu PY----------------PYADMSAPFGRHPVTGEP--LSDKSK------
Mflv_3595|M.gilvum_PYR-GCK SGAYPPPVQGGYPGGYPGSYVDPMAPYGRHPLTGEP--LSDKSK------
Mvan_2820|M.vanbaalenii_PYR-1 P-----------AGGYAGGYVDPAAPWGRHPVTGEP--FSEKSK------
MAB_2641c|M.abscessus_ATCC_199 P------------------YVDPAAPYGRDPATGAP--YSDKSK------
MAV_3436|M.avium_104 PPP---------GYGPPPGYGAPPPGYGPPPGYGPPPGFGGPPKPAFSVG
* . :* * * * . .*
Mb1641|M.bovis_AF2122/97 --------------------------TVAGLLQLLGLFGIAG--------
Rv1615|M.tuberculosis_H37Rv --------------------------TVAGLLQLLGLFGIAG--------
MMAR_2417|M.marinum_M --------------------------TVAGLLQLLGLFGIAG--------
MUL_1595|M.ulcerans_Agy99 --------------------------TVAGLLQLLGLFGIAG--------
MSMEG_3223|M.smegmatis_MC2_155 --------------------------IVAGLLQLIGLVGFVG--------
TH_1095|M.thermoresistible__bu --------------------------IAAGLLQLVGLLGVVG--------
Mflv_3595|M.gilvum_PYR-GCK --------------------------TVAGLLQLLGIFGFLG--------
Mvan_2820|M.vanbaalenii_PYR-1 --------------------------VVGGLLQLLGLFGLVG--------
MAB_2641c|M.abscessus_ATCC_199 --------------------------LVAGLLQLLGLVGFLG--------
MAV_3436|M.avium_104 EAFGWAWNAFTKNPVALIVPTLVYLVVLGGASTLIGLSQDVGTSGGGSGD
.* *:*: *
Mb1641|M.bovis_AF2122/97 --------------------------------------------------
Rv1615|M.tuberculosis_H37Rv --------------------------------------------------
MMAR_2417|M.marinum_M --------------------------------------------------
MUL_1595|M.ulcerans_Agy99 --------------------------------------------------
MSMEG_3223|M.smegmatis_MC2_155 --------------------------------------------------
TH_1095|M.thermoresistible__bu --------------------------------------------------
Mflv_3595|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_2820|M.vanbaalenii_PYR-1 --------------------------------------------------
MAB_2641c|M.abscessus_ATCC_199 --------------------------------------------------
MAV_3436|M.avium_104 DYFTFTANLNGGGMALLVLGYLVAYLVGAFAQSAYLSGCLDLADGRPVTI
Mb1641|M.bovis_AF2122/97 --------IGRIYLGHTGLGIAQLL-------------------------
Rv1615|M.tuberculosis_H37Rv --------IGRIYLGHTGLGIAQLL-------------------------
MMAR_2417|M.marinum_M --------IGRIYMGHTGMGIAQLL-------------------------
MUL_1595|M.ulcerans_Agy99 --------IGRIYMGHTGMGIAQLL-------------------------
MSMEG_3223|M.smegmatis_MC2_155 --------FGRIYLGQTGLGIAQLI-------------------------
TH_1095|M.thermoresistible__bu --------IGRMYIGHTGLGIAQLV-------------------------
Mflv_3595|M.gilvum_PYR-GCK --------IGRMYIGQVGFGVAQLVG------------------------
Mvan_2820|M.vanbaalenii_PYR-1 --------IGRIYLGYTSLGVIQLV-------------------------
MAB_2641c|M.abscessus_ATCC_199 --------FGRIYLGQTLLGVVQLL-------------------------
MAV_3436|M.avium_104 GSFFKPRNFGMVFLAALLVGILTSIASALCFLPGLILGLFAQFTIAYAID
:* :::. .*: :
Mb1641|M.bovis_AF2122/97 -----------------------------------VGWVTCGLG------
Rv1615|M.tuberculosis_H37Rv -----------------------------------VGWVTCGLG------
MMAR_2417|M.marinum_M -----------------------------------VGWLTCGLG------
MUL_1595|M.ulcerans_Agy99 -----------------------------------VGWLTCGLG------
MSMEG_3223|M.smegmatis_MC2_155 -----------------------------------VGLVTCGIG------
TH_1095|M.thermoresistible__bu -----------------------------------IGILTCGIG------
Mflv_3595|M.gilvum_PYR-GCK --------------------------------CLVLGAVTCGVGFIV---
Mvan_2820|M.vanbaalenii_PYR-1 -----------------------------------VGLITCGIG------
MAB_2641c|M.abscessus_ATCC_199 -----------------------------------IGFVTFGIV------
MAV_3436|M.avium_104 RSESAVKALSSSFSTVTANLANALLVWLAEFALVVVGALACGVGLLLAAP
:* :: *:
Mb1641|M.bovis_AF2122/97 -AVIWGVIDALLILTDKVGDPWGRPLRDGS-------------
Rv1615|M.tuberculosis_H37Rv -AVIWGVIDALLILTDKVGDPWGRPLRDGS-------------
MMAR_2417|M.marinum_M -ALVWGVIDAVLILTDKVSDPWGRPLRDGT-------------
MUL_1595|M.ulcerans_Agy99 -ALVWGVIDAVLILTDKVSDPWGRPLRDGT-------------
MSMEG_3223|M.smegmatis_MC2_155 -AFIWGIVDAILILTDKVRDPYGRPLRDGT-------------
TH_1095|M.thermoresistible__bu -AVVWGIVDAVLILTDKVRDSEGRRLRDDL-------------
Mflv_3595|M.gilvum_PYR-GCK -PVIWGIVDAVLMFTDKVRDPQGRPLRDGT-------------
Mvan_2820|M.vanbaalenii_PYR-1 -AIIWGIVDAILILTDKVRDPEGRPLRDGT-------------
MAB_2641c|M.abscessus_ATCC_199 -AVIWAIVDAVLIFGGKVTDKVGRQLRD---------------
MAV_3436|M.avium_104 VAALVGIYAYRKLSGGQVAPPPGYQPGPPPGYQPGPPPGAPPA
. : .: : .:* *