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M. abscessus ATCC 19977 MAB_2524 (-)

MDHTQTPFLDAVDRYHRDNRYGFTPPGHRQGRGVDARVTGIMGMDPFRCDLLASGGLDDRKSSGHYLAQA
EELMADAVGASSAFFSTCGSSLSVKAAMMAVAGGCEGGLLVGRDSHKSIIAGLIFSGVQPRWITPRWDAQ
RHISHPPSPRQVEEAWQQHPDAAGALIVSPSPYGTCADIGAIAQVCHRRGKPLIVDEAWGAHLPFHEELP
TWAMDAGADVCVVSVHKMGAGFEQGSVFHLQGDRVDPARLSACADLLMTTSPNVMVYAAMDGWRRQMVEH
GHELLSHALDLAEQVRGEIADIADVQVMESELLGAEASHDLDRLQVLVDISQTGTSGYQAADWLRQHKQL
DLGLSDHRRFLATMSIADRDLTVERLLGSLSAWRAAAEDFPRPRPLYLPPPQQLQLESVMLPRDAFFGPT
DTVAIGDAAGHIAAEQVTPYPPGIPVVVPGERLTSPVLEYLRSGVKAGMMVPDPADSSLETIRVTAER

Operon Prediction Model: Genebank

Paralogs

species	id	gene	e-value	identity (len)	annotation
M. abscessus ATCC 19977	MAB_2524	-	-	100% (488)	putative Orn/Lys/Arg decarboxylase

Closest Orthologs (e-value cutoff: 1e-4)

species	id	gene	e-value	identity (len)	annotation
M. bovis AF2122 / 97	-	-	-	-	-
M. gilvum PYR-GCK	-	-	-	-	-
M. tuberculosis H37Rv	-	-	-	-	-
M. leprae Br4923	-	-	-	-	-
M. marinum M	-	-	-	-	-
M. avium 104	MAV_2031	-	0.0	72.69% (487)	Orn/Lys/Arg decarboxylase
M. smegmatis MC2 155	MSMEG_0266	-	0.0	70.58% (486)	arginine decarboxylase
M. thermoresistible (build 8)	-	-	-	-	-
M. ulcerans Agy99	-	-	-	-	-
M. vanbaalenii PYR-1	Mvan_2916	-	1e-58	31.22% (490)	Orn/Lys/Arg decarboxylase, major region

CLUSTAL 2.0.9 multiple sequence alignment


MAV_2031|M.avium_104                --MDQSDAPLLNALADYRDKNRYGFAPPGHRQGRGTDDRVLAVLGREPFL
MSMEG_0266|M.smegmatis_MC2_155      --MDQTETPLLDALNEYHASNRYGYSPPGHRQGRGVDDRVLRVLGREPFL
MAB_2524|M.abscessus_ATCC_1997      --MDHTQTPFLDAVDRYHRDNRYGFTPPGHRQGRGVDARVTGIMGMDPFR
Mvan_2916|M.vanbaalenii_PYR-1       MGFEHSRAPLFESLRTFVERDQAPFYSPGHKGGRTIDP----WLRENIAA
                                      :::: :*:::::  :   ::  : .***: **  *      :  :   

MAV_2031|M.avium_104                DDVLASGGLDDRRTSNGYLQRAEDLMAEAVGAEIAWFSTCGSSLSVRAAM
MSMEG_0266|M.smegmatis_MC2_155      SDVLANGGLDDRRSSNGYLQKAEDLMAEAVGADTAWFSTCGSSLSVKAAM
MAB_2524|M.abscessus_ATCC_1997      CDLLASGGLDDRKSSGHYLAQAEELMADAVGASSAFFSTCGSSLSVKAAM
Mvan_2916|M.vanbaalenii_PYR-1       VDLNNLPDTDTLHCPEGPILEAERLIADAWGVPQSFLMVQGSTGGNIAVA
                                     *:    . *  : .   : .** *:*:* *.  ::: . **: .  *. 

MAV_2031|M.avium_104                MAVAGG-QGSLLVGRDSHKSIVAGLIFSGVQPRWITPRWDAERHFSHPPS
MSMEG_0266|M.smegmatis_MC2_155      MAVAGG-DGSLLLSRDSHKSVVAGLIFSGVMPRWITPRWDADRHLSHPPS
MAB_2524|M.abscessus_ATCC_1997      MAVAGGCEGGLLVGRDSHKSIIAGLIFSGVQPRWITPRWDAQRHISHPPS
Mvan_2916|M.vanbaalenii_PYR-1       LTALRP-DEPVLVARNAHKSVLAGLVQVGARPVWLEPRWDAEFGVAHGLD
                                    ::.    :  :*:.*::***::***:  *. * *: *****:  .:*  .

MAV_2031|M.avium_104                PQQVEEAWDKHPDAAGALVVSPSPYGTCADIAGIAEVCHRRGKPLILDEA
MSMEG_0266|M.smegmatis_MC2_155      PEEVEETWRRYPDAAGALIVSPSPYGTCADLAGIADVCHARGKPLIVDEA
MAB_2524|M.abscessus_ATCC_1997      PRQVEEAWQQHPDAAGALIVSPSPYGTCADIGAIAQVCHRRGKPLIVDEA
Mvan_2916|M.vanbaalenii_PYR-1       AAVVARAFETT-GATALWALHPTYYGTTGDLAALADLCRRYGARLLLDGA
                                    .  * .::    .*:.   : *: *** .*:..:*::*:  *  *::* *

MAV_2031|M.avium_104                WGAHLPFHEDLPTWAMDAGADVCVVSVHKMGAGFEQGSVFHVQGDLIDRD
MSMEG_0266|M.smegmatis_MC2_155      WGAHLPFHENLPTWAMNAGADVCVVSVHKMGAGFEQGSAFHLQGDLIDQD
MAB_2524|M.abscessus_ATCC_1997      WGAHLPFHEELPTWAMDAGADVCVVSVHKMGAGFEQGSVFHLQGDRVDPA
Mvan_2916|M.vanbaalenii_PYR-1       HSPHFAFHPDLPTPGEQSGAAATVHSVHKILSGLSQAAVLHVDTAQLDEA
                                     ..*:.** :*** . ::** . * ****: :*:.*.:.:*::   :*  

MAV_2031|M.avium_104                RLSACADLLMTTSPNVLIYAAMDGWRRQMVQHGHQLLGAALDLARQVRDE
MSMEG_0266|M.smegmatis_MC2_155      RLSACADLLMTTSPNVLVYSAIDGWRRQMVEHGHRLFGAALDLADDTRRR
MAB_2524|M.abscessus_ATCC_1997      RLSACADLLMTTSPNVMVYAAMDGWRRQMVEHGHELLSHALDLAEQVRGE
Mvan_2916|M.vanbaalenii_PYR-1       SVRRSLQLIQTTSPHFAIMASVDLARRQMVLDGHALLDATLTRAREAADR
                                     :  . :*: ****:. : :::*  ***** .** *:. :*  * :.  .

MAV_2031|M.avium_104                IELIPDVEVLDDELLGVQAS--HDLDRMQVLIDVCGTGTSGYQAADWLRE
MSMEG_0266|M.smegmatis_MC2_155      IEEIDDVEVLDEELLGAQAS--HDLDRLQILIDVSATGTSGYQAADWLRE
MAB_2524|M.abscessus_ATCC_1997      IADIADVQVMESELLGAEAS--HDLDRLQVLVDISQTGTSGYQAADWLRQ
Mvan_2916|M.vanbaalenii_PYR-1       LSQVPGLTVLRPEHLAGAGTGLCQLDETKLLVGTAGVDADARDILGRLNR
                                    :  : .: *:  * *.  .:   :**. ::*:. . ..:.. :  . *..

MAV_2031|M.avium_104                HARIDVGMSDHRRILATLSMADDKETLGRLTDALRAWRTAAQDFDPAPR-
MSMEG_0266|M.smegmatis_MC2_155      NCQVDVGMSDHRRILATMSVADGSDTAGRLLHALSLWRKAADDFAPPPP-
MAB_2524|M.abscessus_ATCC_1997      HKQLDLGLSDHRRFLATMSIADRDLTVERLLGSLSAWRAAAEDFPRPRP-
Mvan_2916|M.vanbaalenii_PYR-1       IHGVQPELAGAGHILCISTIGNIDDDFYRLTTAFEEVSAHFGRRDAEGAG
                                       ::  ::.  ::*.  ::.: .    **  ::                

MAV_2031|M.avium_104                IALPSPGEMQLETVELPRDAFFGRVQEVPTKTAAGRIAAEQITPYPPGIP
MSMEG_0266|M.smegmatis_MC2_155      IDLPSPAELQLTTKTSPRDAFFAEVEQIPVEHAVGRIAAEQITPYPPGIP
MAB_2524|M.abscessus_ATCC_1997      LYLPPPQQLQLESVMLPRDAFFGPTDTVAIGDAAGHIAAEQVTPYPPGIP
Mvan_2916|M.vanbaalenii_PYR-1       AWTADVLAVRPELVLTPREAFFAADETVALADAAGRIAAEAITPYPPGIP
                                       .    ::      **:***.  : :.   *.*:**** :********

MAV_2031|M.avium_104                AVVPGERLNDAVLDYLCSGVAAGTNLPDAADPSLQTIRVLA--
MSMEG_0266|M.smegmatis_MC2_155      AVVPGERLNEAVLDYLVTGVQAGMNLPDPADPQMGSIRVMA--
MAB_2524|M.abscessus_ATCC_1997      VVVPGERLTSPVLEYLRSGVKAGMMVPDPADSSLETIRVTAER
Mvan_2916|M.vanbaalenii_PYR-1       VVMPGERLGKDVVDLLLR-LRAAGNPISASDPTMGVVKTVR--
                                    .*:***** . *:: *   : *.    ..:*. :  ::.