For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
RRLAFLLRPGWIALALVVVAFAYLCFTVLAPWQLGKNTKTSRENNRIAQSVNADPVPLKNELRPDHSMPE DAEWRRVTATGHYLPDRQVLARLRVVDAKPAYEALTVFQVDDGPAILVNRGYVRPEQGTSVPPIPPAPAG QVTINARLREPEQQSEKSPFLENGQYQVYSIVPVQVSTLVKIPLAGPYLQLSEGQPGGLGAIPLPQLDAG PFLSYGIQWIAFGILAPIGLGYFVFSEIRQRRAAAAAVKAVKPGTPQTTEERLADRYGRR*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. abscessus ATCC 19977 | MAB_1899c | - | - | 100% (271) | hypothetical protein MAB_1899c |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb2259 | - | 1e-93 | 63.97% (272) | transmembrane protein |
| M. gilvum PYR-GCK | Mflv_2887 | - | 8e-92 | 60.87% (276) | putative transmembrane protein |
| M. tuberculosis H37Rv | Rv2235 | - | 1e-93 | 63.97% (272) | transmembrane protein |
| M. leprae Br4923 | MLBr_01644 | - | 1e-90 | 62.36% (271) | hypothetical protein MLBr_01644 |
| M. marinum M | MMAR_3310 | - | 3e-96 | 65.57% (273) | transmembrane protein |
| M. avium 104 | MAV_2204 | - | 2e-94 | 62.32% (276) | hypothetical protein MAV_2204 |
| M. smegmatis MC2 155 | MSMEG_4311 | - | 9e-95 | 63.18% (277) | hypothetical protein MSMEG_4311 |
| M. thermoresistible (build 8) | TH_1462 | - | 1e-91 | 61.21% (281) | PROBABLE CONSERVED TRANSMEMBRANE PROTEIN |
| M. ulcerans Agy99 | MUL_1318 | - | 1e-96 | 65.57% (273) | transmembrane protein |
| M. vanbaalenii PYR-1 | Mvan_3623 | - | 4e-94 | 60.93% (279) | putative transmembrane protein |
CLUSTAL 2.0.9 multiple sequence alignment
Mb2259|M.bovis_AF2122/97 ----MPRLAFLLRPGWLALALVVVAFTYLCFTVLAPWQLGKNAKTSRENQ
Rv2235|M.tuberculosis_H37Rv ----MPRLAFLLRPGWLALALVVVAFTYLCFTVLAPWQLGKNAKTSRENQ
MMAR_3310|M.marinum_M ----MRRLAFLLRPGWIALALVVIAFTYLCFTVLAPWQLGKNTKTSRENR
MUL_1318|M.ulcerans_Agy99 ----MRRLAFLLRPGWIALALVVIAFTYLCFTVLAPWQLGKNTKTSRENR
MLBr_01644|M.leprae_Br4923 ----MRHLALLLRPGWIALTLVVTAFTYLCFMVLAPWQLGKNTRMSRENN
MAV_2204|M.avium_104 MPRWLRGLSFLLRPGWVVLALVVVAFAYLCFTVLAPWQLGKHSRTSQQNH
Mflv_2887|M.gilvum_PYR-GCK --MTVRRWAFLLRPQWLALFVVVAAFAYLCFTVLAPWQLGKNTQTSRENA
Mvan_3623|M.vanbaalenii_PYR-1 ----MRRWAFLLRPQWLALFVVVLAFAYLCFTVLAPWQLGKNTKTSREND
MSMEG_4311|M.smegmatis_MC2_155 ----MRRLGFLLRPQWLALIVVVLAFAYLCFTVLAPWQLGKNTKTSRENS
TH_1462|M.thermoresistible__bu ----MRRWAFLLRPSWLALIVVVLAFAYLCFTVLAPWQLGKNSKTSRENA
MAB_1899c|M.abscessus_ATCC_199 ----MRRLAFLLRPGWIALALVVVAFAYLCFTVLAPWQLGKNTKTSRENN
: .:**** *:.* :** **:**** *********::: *::*
Mb2259|M.bovis_AF2122/97 QIRYSLDTPPVPLKTLLPQQDSSAPDAQWRRVTATGQYLPDVQVLARLRV
Rv2235|M.tuberculosis_H37Rv QIRYSLDTPPVPLKTLLPQQDSSAPDAQWRRVTATGQYLPDVQVLARLRV
MMAR_3310|M.marinum_M QINHALTSPAVPVKTLLPQQDSSAPEAQWRSVTATGHYLSDVQVLARLRV
MUL_1318|M.ulcerans_Agy99 QINHALSSPAVPVKTLLPQQDSSAPEAQWRSVTATGHYLSDVQVLARLRV
MLBr_01644|M.leprae_Br4923 QIEYSLNTPPVPVKTLLSHQDLSTSKSQWRQVTATGRYLPDVQVLARLRV
MAV_2204|M.avium_104 QIEHSLTTPPVPLKTLLPQQNSAAPAEQWRQVSATGHYLADVQVLARLRV
Mflv_2887|M.gilvum_PYR-GCK QISRSLGAEPLPVTSVLPHQDSAAPQEQWQRVTATGRYLPDAQVLARLRL
Mvan_3623|M.vanbaalenii_PYR-1 QISRSLDADPISVTTVLPEQDSAAPDEQWQQVTATGRYLPEAQVLARLRL
MSMEG_4311|M.smegmatis_MC2_155 QIANSLQAEPVPLTDILPHQDSTS-DDQWRRVTATGRYLPEGQVLARLRV
TH_1462|M.thermoresistible__bu QIERSLTAEPVPVTTLLPEQDSAAPDEQWRRVTATGRYLPEAQVLARLRS
MAB_1899c|M.abscessus_ATCC_199 RIAQSVNADPVPLKNELRPDHSMPEDAEWRRVTATGHYLPDRQVLARLRV
:* :: : .:.:. * :. . :*: *:***:**.: *******
Mb2259|M.bovis_AF2122/97 VEGDQAFEVLAPFVVDGGPTVLVDRGYVRPQVGSHVPPIPRLPVQTVTIT
Rv2235|M.tuberculosis_H37Rv VEGDQAFEVLAPFVVDGGPTVLVDRGYVRPQVGSHVPPIPRLPVQTVTIT
MMAR_3310|M.marinum_M VDGDQAFEVLTPFAVDGGPTVLVDRGYVRPEPGSHVPPIPRAPDQTLTIT
MUL_1318|M.ulcerans_Agy99 VDGDQAFEVLTPFAVDGGPTVLVDRGYVRPEPGSHVPPIPRAPDQTLTIT
MLBr_01644|M.leprae_Br4923 VDSGQAFEVLAPFVVDDGPTVLVDRGYVRPEPGSHVPPIPRPPNEAVSIT
MAV_2204|M.avium_104 IDSKPAFEVLAPFVVDGGPTVLVDRGYVRPLEGSRVPPIPRPPADTVTIT
Mflv_2887|M.gilvum_PYR-GCK IDGDPAFEVLVPFAVDGGPTVLVDRGYVRPVAGSQPPAIDAPPSETVTIT
Mvan_3623|M.vanbaalenii_PYR-1 IDGDPAFEVLVPFAVDGGPTVLVDRGYVRPIEGSKVPPIDALPTGTVTIT
MSMEG_4311|M.smegmatis_MC2_155 IEGEPAFEVLTPFAVEGGPTILVDRGYVRPVEGSGVPAIDPPPTDTVSIT
TH_1462|M.thermoresistible__bu IGGEPAFEVLVPFAVDGGPTVLVDRGYVRPEQGR-VPDIPPVPREPVTIT
MAB_1899c|M.abscessus_ATCC_199 VDAKPAYEALTVFQVDDGPAILVNRGYVRPEQGTSVPPIPPAPAGQVTIN
: . *:*.*. * *:.**::**:****** * * * * ::*.
Mb2259|M.bovis_AF2122/97 ARLRDSEPSVAGKDPFVRDGFQQVYSINTGQVAALTGVQLAGSYLQLIED
Rv2235|M.tuberculosis_H37Rv ARLRDSEPSVAGKDPFVRDGFQQVYSINTGQVAALTGVQLAGSYLQLIED
MMAR_3310|M.marinum_M ARLRDFEPTMAGKEPFSRDGFEQVYSINAKQISTLTGVPLAGSYLQLVEN
MUL_1318|M.ulcerans_Agy99 ARLRDFEPTMAGKEPFSRDGFEQVYSINAKQISTLTGVPLAGSYLQLVEN
MLBr_01644|M.leprae_Br4923 ARLRDSEPVMKDKEPFSRDGVQQVYSINIEQVARLTKIPLAGSYLQLVDN
MAV_2204|M.avium_104 ARLRNSEPAAAGKDPFVGDGVRQVYSIDTEQIAVLTKVPLAGSYLQLVDG
Mflv_2887|M.gilvum_PYR-GCK ARLRDSEGLARDKEPFQVDGVQQVYSININQISTLTGVPLVGSYLQLVDN
Mvan_3623|M.vanbaalenii_PYR-1 ARLRDSEGVARDKTPFEADGVKQVYSINTEQISSVTGVPLAGSYLQLVAD
MSMEG_4311|M.smegmatis_MC2_155 ARLRDSEAVATGKEPFRADGALQVYSINTGQVSQLTGTPLAGSYLQLVDN
TH_1462|M.thermoresistible__bu ARLRDSEGVNPGREPFHGDGALQVYSINTAQIAELTGVPLTGSYLQLVGG
MAB_1899c|M.abscessus_ATCC_199 ARLREPEQ-QSEKSPFLENGQYQVYSIVPVQVSTLVKIPLAGPYLQLSEG
****: * : ** :* ***** *:: :. *.*.**** .
Mb2259|M.bovis_AF2122/97 QPGGLGVLGVPHLDPGPFLSYGIQWISFGILAPIGLGYFAYAEIRARRRE
Rv2235|M.tuberculosis_H37Rv QPGGLGVLGVPHLDPGPFLSYGIQWISFGILAPIGLGYFAYAEIRARRRE
MMAR_3310|M.marinum_M QPGGLGLIGLPHLDSGPFLSYGIQWIAFGILAPIGLGYFAYAELRARRRE
MUL_1318|M.ulcerans_Agy99 QPGGLGLIGLPHLDSGPFLSYGIQWIAFGILAPIGLGYFAYAELRARRRE
MLBr_01644|M.leprae_Br4923 QPGGLGVIDIPHLDAGPFLSYGIQWISFGIIAPIGLGYLAYAEIRTHRQE
MAV_2204|M.avium_104 QPGGLGVVGVPQLDAGPFLSYGIQWIAFGILAPIGVGYFAYSELRARRAE
Mflv_2887|M.gilvum_PYR-GCK QPGGLGVIPLPHLDAGPFLSYGIQWIAFGIIAPIGVGYFVYSEIKVRRRE
Mvan_3623|M.vanbaalenii_PYR-1 QPGGLGVIPLPHLDAGPFLSYGIQWIAFGIIAPIGVGYFVYSEIRVRRRE
MSMEG_4311|M.smegmatis_MC2_155 QPGGLGAIPLPHLDAGPFLSYGIQWIAFGIIAPIGLGYFMYAEIQQRRRE
TH_1462|M.thermoresistible__bu QPGGLGEIELPHLDAGPFLSYGIQWIAFGIIAPIGLGYFVWAEVQQRRRE
MAB_1899c|M.abscessus_ATCC_199 QPGGLGAIPLPQLDAGPFLSYGIQWIAFGILAPIGLGYFVFSEIRQRRAA
****** : :*:**.***********:***:****:**: ::*:: :*
Mb2259|M.bovis_AF2122/97 ---KAGSPPPDK--------PMTVEQKLADRYGRRR
Rv2235|M.tuberculosis_H37Rv ---KAGSPPPDK--------PMTVEQKLADRYGRRR
MMAR_3310|M.marinum_M TRAREDAPPADT--------PMTVEQKLADRYGRRR
MUL_1318|M.ulcerans_Agy99 TRAREDAPPADT--------PMTVEQKLADRYGRRR
MLBr_01644|M.leprae_Br4923 ----KLAKPSQA--------PMAVEEKLADRYGHPR
MAV_2204|M.avium_104 K--QPAAPAAEA--------PQSVQDKLADRYGRRR
Mflv_2887|M.gilvum_PYR-GCK KALAA--AAAES---AEAGAAPTTEQKLADRYGKRR
Mvan_3623|M.vanbaalenii_PYR-1 KALAD--AASSESSGDEPAAPLSTEQKLADRYGKRR
MSMEG_4311|M.smegmatis_MC2_155 RAAQAKKDAAGPR----PAAELTPEEKLADRYGKRR
TH_1462|M.thermoresistible__bu KAAQQDRAQADIRGDAAAGKPLTAEEKLADRYGRR-
MAB_1899c|M.abscessus_ATCC_199 AAAVKAVKPGTP---------QTTEERLADRYGRR-
: :::******: