For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
TILAPEAIDESLDPRDPLLRLNTFFDDGSVELLHERDRSGVLAAAGTVNGVRTIAFCTDGTVMGGAMGVE GCRHIVNAYDTAIEEQSPIVGIWHSGGARLAEGVKALHAVGLVFEAMIRASGYIPQISVVVGFAAGGAAY GPALTDVIIMAPESRVFVTGPDVVRSVTGEDVDMATLGGPDAHHKKSGVCHIVADDELDAYARGRKLVGF FCQQGVFDRGRAEADHTDLRALLPESAKRAYDVHPIVNALLDGDDPFEEFQGKWAPSMVIGLGRLAGRTV GVLANNPLRLGGCLNSESAEKAARFVRLCNAFGIPLIVLVDVPGYLPGVGQEWGGVVRRGAKLLHAFGEA TVPRVTLVTRKIYGGAYIAMNSRSLGATKVFAWPDAEVAVMGAKAAVGILHKKQLAAAAPEEREALHEEL ALEHERIAGGVDRAIEIGVVDEEIEPSQTRAVLTRALAEAPSRRGRHKNIPL*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. abscessus ATCC 19977 | MAB_1876c | - | - | 100% (473) | propionyl-CoA carboxylase beta chain 6 |
M. abscessus ATCC 19977 | MAB_3631 | - | e-101 | 43.54% (457) | propionyl-CoA carboxylase beta chain 5 AccD5 |
M. abscessus ATCC 19977 | MAB_0181 | - | 5e-68 | 33.88% (428) | propionyl-CoA carboxylase, beta subunit (PccB) |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2271 | accD6 | 0.0 | 86.89% (473) | acetyl/propionyl-CoA carboxylase beta subunit AccD6 |
M. gilvum PYR-GCK | Mflv_2775 | - | 0.0 | 87.45% (470) | propionyl-CoA carboxylase |
M. tuberculosis H37Rv | Rv2247 | accD6 | 0.0 | 86.89% (473) | acetyl/propionyl-CoA carboxylase beta subunit AccD6 |
M. leprae Br4923 | MLBr_01657 | - | 0.0 | 83.72% (473) | acetyl/propionyl CoA carboxylase beta subunit |
M. marinum M | MMAR_3340 | accD6 | 0.0 | 86.89% (473) | acetyl/propionyl-CoA carboxylase (beta subunit) AccD6 |
M. avium 104 | MAV_2190 | - | 0.0 | 87.32% (473) | propionyl-CoA carboxylase beta chain |
M. smegmatis MC2 155 | MSMEG_4329 | - | 0.0 | 87.13% (474) | propionyl-CoA carboxylase beta chain |
M. thermoresistible (build 8) | TH_2704 | - | 0.0 | 87.63% (477) | PUTATIVE propionyl-CoA carboxylase beta chain |
M. ulcerans Agy99 | MUL_1302 | accD6 | 0.0 | 86.68% (473) | acetyl/propionyl-CoA carboxylase (beta subunit) AccD6 |
M. vanbaalenii PYR-1 | Mvan_3758 | - | 0.0 | 86.78% (469) | propionyl-CoA carboxylase |
CLUSTAL 2.0.9 multiple sequence alignment MMAR_3340|M.marinum_M MTIM----APEAVGESLDPRDPLLRLSNFFDDGTVVLLHERDRSGVLAAS MUL_1302|M.ulcerans_Agy99 MTIM----APEAVGESLDPRDPLLRLSNFFDDGTVVLLHERDRSGVLAAS Mb2271|M.bovis_AF2122/97 MTIM----APEAVGESLDPRDPLLRLSNFFDDGSVELLHERDRSGVLAAA Rv2247|M.tuberculosis_H37Rv MTIM----APEAVGESLDPRDPLLRLSNFFDDGSVELLHERDRSGVLAAA MLBr_01657|M.leprae_Br4923 MTIT----APKVVGKSIDPRDPLLRLSNFFDDGRVEPLHERNQSGVFAAT MAV_2190|M.avium_104 MTIT----APETVGESLDPRDPLLRLSNFFDDGSVALLHERDRSGVLAAA TH_2704|M.thermoresistible__bu MTIM----APEAVGESLDPRDPLLRLSTFFDDGSIELLHERDRSGVLAAA Mflv_2775|M.gilvum_PYR-GCK MTTIENPPAPGAVNESLDPRDPLLRLATFFDDGSVELLHERDKSGVLAGA Mvan_3758|M.vanbaalenii_PYR-1 MTTIENPPAPESVNESLDPRDPLLRLATFFDDGTVELLHERDKSGILAAS MSMEG_4329|M.smegmatis_MC2_155 MTIM----APEAAAESLDPRDPLLRLSTFFDDGSVELLHERDRSGVLAAA MAB_1876c|M.abscessus_ATCC_199 MTIL----APEAIDESLDPRDPLLRLNTFFDDGSVELLHERDRSGVLAAA ** ** :*:********* .***** : ****::**::*.: MMAR_3340|M.marinum_M GTVNGVRTIAFCTDGTVMGGAMGVEGCAHIVNAYDTAIDEQSPIVGIWHS MUL_1302|M.ulcerans_Agy99 GTVNGVRTIAFCTDGTVMGGAMGVEGCAHIVNAYDTAIDEQSPIVGIWHS Mb2271|M.bovis_AF2122/97 GTVNGVRTIAFCTDGTVMGGAMGVEGCTHIVNAYDTAIEDQSPIVGIWHS Rv2247|M.tuberculosis_H37Rv GTVNGVRTIAFCTDGTVMGGAMGVEGCTHIVNAYDTAIEDQSPIVGIWHS MLBr_01657|M.leprae_Br4923 GTVNGLRTIAFCTDGTVMGGAMGIEGCAHIVNAYDTAIEEQSPIVGIWHS MAV_2190|M.avium_104 GTVNGVRTIAFCTDGTVMGGAMGIEGCSHIVDAYDTAIEEQSPIVGIWHS TH_2704|M.thermoresistible__bu GTVNGVRTIAFCTDGTVMGGAMGTDGCRHIVDAYDTAIEEQSPIVGIWHS Mflv_2775|M.gilvum_PYR-GCK GTVNGVRTIAFCTDGTVMGGAMGVEGCKHIVDAYDVAIDEQSPIVGIWHS Mvan_3758|M.vanbaalenii_PYR-1 GSVNGVRTIAFCTDGTVMGGAMGVDGCAHIVNAYDLAIEEQSPIVGIWHS MSMEG_4329|M.smegmatis_MC2_155 GTVNGVRTVAFCTDGTVMGGAMGVEGCAHIVDAYDTAIEEQSPIVGIWHS MAB_1876c|M.abscessus_ATCC_199 GTVNGVRTIAFCTDGTVMGGAMGVEGCRHIVNAYDTAIEEQSPIVGIWHS *:***:**:************** :** ***:*** **::********** MMAR_3340|M.marinum_M GGARLAEGVRALHAVGQVFEAMIRASGYVPQVSVVVGFAAGGAAYGPALT MUL_1302|M.ulcerans_Agy99 GGARLAEGVRALHAVGQVFEAMIRASGYVPQVSVVVGFAAGGAAYGPALT Mb2271|M.bovis_AF2122/97 GGARLAEGVRALHAVGQVFEAMIRASGYIPQISVVVGFAAGGAAYGPALT Rv2247|M.tuberculosis_H37Rv GGARLAEGVRALHAVGQVFEAMIRASGYIPQISVVVGFAAGGAAYGPALT MLBr_01657|M.leprae_Br4923 GGARLAEGVRALHAVGQVFEAMIRASGYIPQISVVVGFAAGGAAYGPALT MAV_2190|M.avium_104 GGARLAEGVKALHAVGLVFEAMIRASGYIPQISVVVGFAAGGAAYGPALT TH_2704|M.thermoresistible__bu GGARLAEGVRALHAVGLVFEAMIRASGYIPQISVVVGFAAGGAAYGPALT Mflv_2775|M.gilvum_PYR-GCK GGARLAEGVKALHAVGLVFEAMIRASGYIPQISVVVGFAAGGAAYGPALT Mvan_3758|M.vanbaalenii_PYR-1 GGARLAEGVKALHAVGLVFEAMIRASGYIPQISVVVGFAAGGAAYGPALT MSMEG_4329|M.smegmatis_MC2_155 GGARLAEGVKALHAVGLMFEAMIRASGYVPQISVVVGFAAGGAAYGPALT MAB_1876c|M.abscessus_ATCC_199 GGARLAEGVKALHAVGLVFEAMIRASGYIPQISVVVGFAAGGAAYGPALT *********:****** :**********:**:****************** MMAR_3340|M.marinum_M DVVVMAPESRVFVTGPDVVRSVTGEDVDMASLGGPETHHKKSGVCHIVAD MUL_1302|M.ulcerans_Agy99 DVVVMAPESRVFVTGPDVVRSVTGEDVDMASLGGPETHHKKSGVCHIVAD Mb2271|M.bovis_AF2122/97 DVVVMAPESRVFVTGPDVVRSVTGEDVDMASLGGPETHHKKSGVCHIVAD Rv2247|M.tuberculosis_H37Rv DVVVMAPESRVFVTGPDVVRSVTGEDVDMASLGGPETHHKKSGVCHIVAD MLBr_01657|M.leprae_Br4923 DVVIMAPEGRVFVTGPDVVRSVTGEDVDMASLGGPETHHKKSGVCHIVAN MAV_2190|M.avium_104 DVVVMAPESRVFVTGPDVVRSVTGEDVDMASLGGPETHHKKSGVCHIVAD TH_2704|M.thermoresistible__bu DVVIMAPEGRVFVTGPDVVRSVTGEDVDMASLGGPDTHHKKSGVCHIVAD Mflv_2775|M.gilvum_PYR-GCK DVIVMAPDSKVFVTGPDVVRSVTGEDVDMVSLGGPEAHHKKSGVCHIVAD Mvan_3758|M.vanbaalenii_PYR-1 DVIVMAPDSKVFVTGPDVVRSVTGEDVDMVSLGGPEAHHKKSGVCHIVAD MSMEG_4329|M.smegmatis_MC2_155 DVIVMAPDSKIFVTGPDVVRSVTGEDVDMVSLGGPEAHHKKSGVCHIVAD MAB_1876c|M.abscessus_ATCC_199 DVIIMAPESRVFVTGPDVVRSVTGEDVDMATLGGPDAHHKKSGVCHIVAD **::***:.::******************.:****::************: MMAR_3340|M.marinum_M DELDAYERGRRLVGLFCQQGHFDRSKAEAGDTDIHALLPESARRAYDVHP MUL_1302|M.ulcerans_Agy99 DELDAYERGRRLVGLFCQQGHFDRSKAEAGDTDIHALLPESARRAYDVHP Mb2271|M.bovis_AF2122/97 DELDAYDRGRRLVGLFCQQGHFDRSKAEAGDTDIHALLPESSRRAYDVRP Rv2247|M.tuberculosis_H37Rv DELDAYDRGRRLVGLFCQQGHFDRSKAEAGDTDIHALLPESSRRAYDVRP MLBr_01657|M.leprae_Br4923 DELDAYERGRRLVGLFCQQGHFDRSKAEAGDTNIQALLPESSRRAYDVHP MAV_2190|M.avium_104 DELDAYERGRRLVGLFCQQGHFDRTKAEAGDTDIHALLPESARRAYDVRP TH_2704|M.thermoresistible__bu DELDAYERGRRLVGLFCQQGHFDRAKAEAGESDLHALLPESPRRAYDVHP Mflv_2775|M.gilvum_PYR-GCK DELDAYERGRRLVGLFCQQGHFDRTKAEAGDTDLKALLPESARRAYDVHP Mvan_3758|M.vanbaalenii_PYR-1 DELDAYERGRRLVGLFCQQGHFDRSKAEAGDTDLKALLPESARRAYDVHP MSMEG_4329|M.smegmatis_MC2_155 DELDAYERGRRLVGLFCQQGHFDRSKAEAGDSDLHALLPDSARRAYDVHP MAB_1876c|M.abscessus_ATCC_199 DELDAYARGRKLVGFFCQQGVFDRGRAEADHTDLRALLPESAKRAYDVHP ****** ***:***:***** *** :***..::::****:*.:*****:* MMAR_3340|M.marinum_M IVTAILDAD---TPFDEFQANWAPSMVVGLGRLSGRTVGVLANNPLRLGG MUL_1302|M.ulcerans_Agy99 IVTAILDAD---TPFDEFQANWAPSMVVGLGRLSGRTVGVLANNPLRLGG Mb2271|M.bovis_AF2122/97 IVTAILDAD---TPFDEFQANWAPSMVVGLGRLSGRTVGVLANNPLRLGG Rv2247|M.tuberculosis_H37Rv IVTAILDAD---TPFDEFQANWAPSMVVGLGRLSGRTVGVLANNPLRLGG MLBr_01657|M.leprae_Br4923 VVTAILDEN---TPFDEFQANWAPSMVVGLGRLSGRTVGVLANNPLRLGG MAV_2190|M.avium_104 IVTAILDDE---TPFDEFQANWAPSMVIGLGRLSGRTVGVLANNPLRLGG TH_2704|M.thermoresistible__bu IVTELLDKEDGVSTFEEFQAKWAPSMVVGLGRLSGRTVGVLANNPLRLGG Mflv_2775|M.gilvum_PYR-GCK LVEALLDEG---VPFEEFQSRWAPSIVVGLGRLAGRTVGVIANNPLRLGG Mvan_3758|M.vanbaalenii_PYR-1 LIEALLDEG---VPFEEFQSRWAPSIVVGLGRLAGRTVGVIANNPLRLGG MSMEG_4329|M.smegmatis_MC2_155 LVHALLDEG---VPFEEFQAKWAPSIVVGLGRLAGRTIGVIANNPLRLGG MAB_1876c|M.abscessus_ATCC_199 IVNALLDGD---DPFEEFQGKWAPSMVIGLGRLAGRTVGVLANNPLRLGG :: :** .*:***..****:*:*****:***:**:********* MMAR_3340|M.marinum_M CLNSESAEKAARFVRLCDAFGIPLVVVVDVPGYLPGVDQEWGGVVRRGAK MUL_1302|M.ulcerans_Agy99 CLNSESAEKAARFVRLCDAFGIPLVVVVDVPGYLPGVDQEWGGVVRRGAK Mb2271|M.bovis_AF2122/97 CLNSESAEKAARFVRLCDAFGIPLVVVVDVPGYLPGVDQEWGGVVRRGAK Rv2247|M.tuberculosis_H37Rv CLNSESAEKAARFVRLCDAFGIPLVVVVDVPGYLPGVDQEWGGVVRRGAK MLBr_01657|M.leprae_Br4923 CLNSESAEKAARFVRLCDAFGIPLVVIVDVPGYLPGVDQEWGGVVRRGAK MAV_2190|M.avium_104 CLNSESAEKAARFVRLCDAFGIPLVVIVDVPGYLPGVDQEWGGVVRRGAK TH_2704|M.thermoresistible__bu CLNSESAEKAARFVRLCDAFGIPLVVIVDVPGYLPGVDQEWGGVVRRGAK Mflv_2775|M.gilvum_PYR-GCK CLNSESAEKSARFVRLCDAFGIPLVVIVDVPGYLPGVDQEWGGVVRRGAK Mvan_3758|M.vanbaalenii_PYR-1 CLNSESAEKSARFVRLCDAFGIPLVVVVDVPGYLPGVDQEWGGVVRRGAK MSMEG_4329|M.smegmatis_MC2_155 CLNSESAEKSARFVRLCDAFGIPLVVIVDVPGYLPGVDQEWGGVVRRGAK MAB_1876c|M.abscessus_ATCC_199 CLNSESAEKAARFVRLCNAFGIPLIVLVDVPGYLPGVGQEWGGVVRRGAK *********:*******:******:*:**********.************ MMAR_3340|M.marinum_M LLHAFGECTVPRVTLVTRKTYGGAYIAMNSRSLNATKVFAWPDAEVAVMG MUL_1302|M.ulcerans_Agy99 LLHAFGECTVPRVTLVTRKTYGGAYIAMNSRSLNATKVFAWPDAEVAVMG Mb2271|M.bovis_AF2122/97 LLHAFGECTVPRVTLVTRKTYGGAYIAMNSRSLNATKVFAWPDAEVAVMG Rv2247|M.tuberculosis_H37Rv LLHAFGECTVPRVTLVTRKTYGGAYIAMNSRSLNATKVFAWPDAEVAVMG MLBr_01657|M.leprae_Br4923 LLHAFGECTVPRVTLVTRKTYGGAYIAMNSRSLNATKVFAWPDAEVAVMG MAV_2190|M.avium_104 LLHAFGEATVPRVTLVTRKTYGGAYIAMNSRSLNATKVFAWPDAEVAVMG TH_2704|M.thermoresistible__bu LLHAFGEASVPRVTLVTRKIYGGAYIAMNSRSLNATKVFAWPDAEVAVMG Mflv_2775|M.gilvum_PYR-GCK LLHAFGESSVPRVTLVTRKIYGGAYIAMNSRSLNATKVFAWPEAEVAVMG Mvan_3758|M.vanbaalenii_PYR-1 LLHAFGESSVPRVTLVTRKIYGGAYIAMNSRSLNATKVFAWPEAEVAVMG MSMEG_4329|M.smegmatis_MC2_155 LLHAFGESTVPRVTLVTRKIYGGAYIAMNSRSLNATKVFAWPDAEVAVMG MAB_1876c|M.abscessus_ATCC_199 LLHAFGEATVPRVTLVTRKIYGGAYIAMNSRSLGATKVFAWPDAEVAVMG *******.:********** *************.********:******* MMAR_3340|M.marinum_M AKAAVGILHKKKLAAAAE-HEREALHDELAAEHERIAGGVDSAIDIGVVD MUL_1302|M.ulcerans_Agy99 AKAAVGILHKKKLAAAAE-HEREALHDELAAEHERIAGGVDSAIDIGVVD Mb2271|M.bovis_AF2122/97 AKAAVGILHKKKLAAAPE-HEREALHDQLAAEHERIAGGVDSALDIGVVD Rv2247|M.tuberculosis_H37Rv AKAAVGILHKKKLAAAPE-HEREALHDQLAAEHERIAGGVDSALDIGVVD MLBr_01657|M.leprae_Br4923 AKAAVGILHKRKLAAAPN-DEREALHDDLAAEHERIAGGVDSAIDIGVVD MAV_2190|M.avium_104 AKAAVGILHKKKLAAAPE-HEREALHDQLAAEHEKIAGGVDSAIEIGVVD TH_2704|M.thermoresistible__bu AKAAVGILHKKKLAAVEDPVEREALHEQLAVEHEKIAGGVDSAIEIGVVD Mflv_2775|M.gilvum_PYR-GCK AKAAVGILHKKKLAAVEDPAEREALHEELAVEHERIAGGVDSAIEIGVVD Mvan_3758|M.vanbaalenii_PYR-1 AKAAVGILHKKKLAAAPD-HERESLHEALALEHERIAGGVDSAIEIGVVD MSMEG_4329|M.smegmatis_MC2_155 AKAAVGILHKKKLAAVEDPAEREALHEQLAVEHEKIAGGVDSAIEIGVVD MAB_1876c|M.abscessus_ATCC_199 AKAAVGILHKKQLAAAAP-EEREALHEELALEHERIAGGVDRAIEIGVVD **********::***. ***:**: ** ***:****** *::***** MMAR_3340|M.marinum_M EKIDPAHTRSRLTEALAQAPARRGRHKNIPL MUL_1302|M.ulcerans_Agy99 EKIDPAHTRSRLTEVLAQAPARRGRHKNIPL Mb2271|M.bovis_AF2122/97 EKIDPAHTRSKLTEALAQAPARRGRHKNIPL Rv2247|M.tuberculosis_H37Rv EKIDPAHTRSKLTEALAQAPARRGRHKNIPL MLBr_01657|M.leprae_Br4923 EKINPAHTRSKLTEALAQSPVRRGRHKNIPL MAV_2190|M.avium_104 EKIDPAHTRSKLTEALAQAPARRGRHKNIPL TH_2704|M.thermoresistible__bu EKIDPSLTRSKLAQALAEAPARRGRHKNIPL Mflv_2775|M.gilvum_PYR-GCK EKIDPSHTRSRLTQALAEAPMRRGRHKNIPL Mvan_3758|M.vanbaalenii_PYR-1 EKIDPSHTRSKLTQALAEAPMRRGRHKNIPL MSMEG_4329|M.smegmatis_MC2_155 EKIDPSHTRSKLTEALAEAPHRRGRHKNIPL MAB_1876c|M.abscessus_ATCC_199 EEIEPSQTRAVLTRALAEAPSRRGRHKNIPL *:*:*: **: *:..**::* **********