For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
THPRKRHAGARILFGLLATIVSMSAGCTPTEQPPIPFTGLTKDLRIRWSAEPGIDLLTGPAVIVRAYRES YVVGGLMANPAYYYPGFEHAVPQNGPNVSPLIRPLVTGDSQLERRGFQIATPIVGTWREHILSLTGDPTS GYTAKVCVWDTGTGVLAPNGQYRYPNRLPSNSMWSVRAGVGTLAVRITITPPPPFEPDPTKKSQQGSAPN PSTDIFGGWKIRAADSLGIASWMDQRSDWPLDDFRLTLNACGERAPDLLTGQGNFITVGDHPRSDFPTLP ADPGWPAAGT*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. abscessus ATCC 19977 | MAB_1284c | - | - | 100% (291) | hypothetical protein MAB_1284c |
| M. abscessus ATCC 19977 | MAB_1104c | - | 1e-08 | 26.60% (297) | hypothetical protein MAB_1104c |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | - | - | - | - | - |
| M. gilvum PYR-GCK | - | - | - | - | - |
| M. tuberculosis H37Rv | - | - | - | - | - |
| M. leprae Br4923 | - | - | - | - | - |
| M. marinum M | MMAR_1533 | - | 4e-42 | 39.45% (289) | hypothetical protein MMAR_1533 |
| M. avium 104 | MAV_4813 | - | 1e-20 | 33.48% (230) | hypothetical protein MAV_4813 |
| M. smegmatis MC2 155 | MSMEG_5090 | - | 1e-21 | 29.32% (266) | hypothetical protein MSMEG_5090 |
| M. thermoresistible (build 8) | TH_3379 | - | 3e-07 | 39.74% (78) | PUTATIVE - |
| M. ulcerans Agy99 | MUL_2304 | - | 7e-26 | 32.65% (294) | hypothetical protein MUL_2304 |
| M. vanbaalenii PYR-1 | - | - | - | - | - |
CLUSTAL 2.0.9 multiple sequence alignment
MAV_4813|M.avium_104 --------------------------------------------------
MUL_2304|M.ulcerans_Agy99 MMRIRPELRTIAAFLAVAVLLVGGCGSGGRSGEGPASTSAVAPAGWPAAL
MSMEG_5090|M.smegmatis_MC2_155 -------------------------------------MKETPPAGWPQSL
MMAR_1533|M.marinum_M MSATRRVSRALATLPVVMMAAIG-------CSHSEPAPPPLSKVPWTGLL
MAB_1284c|M.abscessus_ATCC_199 MTHPRKRHAGARILFGLLATIVS--------MSAGCTPTEQPPIPFTGLT
TH_3379|M.thermoresistible__bu --------------------------------------------------
MAV_4813|M.avium_104 --------------------MPVRAYTESYLLASIMGDNRYLYPGFQQSV
MUL_2304|M.ulcerans_Agy99 DDFTMVWTAEPGIDVTAWPAVVVRAYTESFLLASITRDDKYLYPGFAQSV
MSMEG_5090|M.smegmatis_MC2_155 SDFSMTWTAEPGIDLTKRPAVVARAYIESFYLADFTDDERYLYPGFEGSV
MMAR_1533|M.marinum_M AQEREVWSAEPGIDLVTGPAVVIRAYLESRMVASQMGDIDYVYPGFKHAV
MAB_1284c|M.abscessus_ATCC_199 KDLRIRWSAEPGIDLLTGPAVIVRAYRESYVVGGLMANPAYYYPGFEHAV
TH_3379|M.thermoresistible__bu ----------------------------MPYLGAMVGDDRNTAG------
:. :
MAV_4813|M.avium_104 DP------NQSINHPIGTQSLWP-KTNAPQQ-QWIGTVQVHILSVT-TAG
MUL_2304|M.ulcerans_Agy99 DP------NKSIHDPISTQFLWP-KTDEPREPRWVGTQRDHILSVT-TSG
MSMEG_5090|M.smegmatis_MC2_155 SR------NQS-DGPEGSDSLWP-ASDGADA--VVGTFRQHLLRID-QSG
MMAR_1533|M.marinum_M APNDPAEPDYSLNPPPVTFNLWPDPSGGPSRYPGVGTSRSHILRID-TSG
MAB_1284c|M.abscessus_ATCC_199 PQNGPN--VSPLIRPLVTGDSQLERRGFQIATPIVGTWREHILSLTGDPT
TH_3379|M.thermoresistible__bu --------------------------------------------------
MAV_4813|M.avium_104 RDVTVVACEYTFGSAQPARHG---YEPN-----IGKPPPYSGIDPLRITM
MUL_2304|M.ulcerans_Agy99 RDVTVIVCEYTFGVASESYLRGGWWRAH-----VVGPEPYSGIDKMRITM
MSMEG_5090|M.smegmatis_MC2_155 QDVSVVGCMYTYDSALEVGGK---FKAN-----TEN-GPFGGINAFRVEL
MMAR_1533|M.marinum_M RQVTAVVCVWDYGTAYDIGDGRYSNDPTNP---LGTHNPDGGIFAQWVAM
MAB_1284c|M.abscessus_ATCC_199 SGYTAKVCVWDTGTGVLAPNGQYRYPNRLPSNSMWSVRAGVGTLAVRITI
TH_3379|M.thermoresistible__bu ---------------------------------------FTPLDGLHSEM
:
MAV_4813|M.avium_104 ETPAKP--GPQSP-QRGPARSPSVDVFNGWRIT--SHQGGYFAQSGVGDE
MUL_2304|M.ulcerans_Agy99 TAPVKPV-APLPA-QQGPARAPSIDVFAGWRIT--SRQGGWFVAAGVGSD
MSMEG_5090|M.smegmatis_MC2_155 QAPKDD--DLLPP-QQGPSRAPFGNVFGNWKVT--NHQGGYLVTA----E
MMAR_1533|M.marinum_M TAPAPDTSPPLPP-QRGPAPAPTTDVFDGWRIVGYAIHGPTDTLRLAPPQ
MAB_1284c|M.abscessus_ATCC_199 TPPPPFEPDPTKKSQQGSAPNPSTDIFGGWKIR-AADSLGIASWMDQRSD
TH_3379|M.thermoresistible__bu P-------------RSAALFAPAIDVSGDWTIT----GYLNWFWVYQTPE
: .. * :: .* : :
MAV_4813|M.avium_104 WPNAIE--DRNTCLAKASQHPD----LQRGGEYPRTDFPTLPPSPGWPAP
MUL_2304|M.ulcerans_Agy99 WPGAAE--DRDTCLAKAPPHPD----LVPGEEYDRSLFPTLPASPGWPST
MSMEG_5090|M.smegmatis_MC2_155 WPNHSE--DNEQCLARSGVTPESR-KFYPGTTYQRSDFPVLPATPGWPAE
MMAR_1533|M.marinum_M WPTRQA--DTNACVTKAPDPPQRR-VFLADGVHPRSDFPTQPPYPGWPIA
MAB_1284c|M.abscessus_ATCC_199 WPLDDFRLTLNACGERAPDLLTGQGNFITVGDHPRSDFPTLPADPGWPAA
TH_3379|M.thermoresistible__bu WPHGQE--DLNARIDRAPDSHQHR-QLLIVGPHPRDYFPTEPAWPGWPRA
** : :: : : * **. *. ****
MAV_4813|M.avium_104 SAAS-----
MUL_2304|M.ulcerans_Agy99 SANA-----
MSMEG_5090|M.smegmatis_MC2_155 SDTSTHEPR
MMAR_1533|M.marinum_M NPA------
MAB_1284c|M.abscessus_ATCC_199 GT-------
TH_3379|M.thermoresistible__bu VK-------