For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
LDIQHVLNADISTRSVVESMIREDATIATGELYDVANILGMSDQQVRLCIKRLVAEGRFTQEGRGRKAIL HATGATRNTLEPDLDFVRYMYQQDRGLAPWDGGWHLTAFAVPESARTARDAMREEIVRLGGAPIQGGLYV CANAWESRVGAAAERLGVAEHVTMFTTTDLAIGGETGARELAERLWPIDAIAERHRRLLAVAEGLLPVLR TASPTELLTLAVALAAEFTRAVEPDPLLPPQLLPQPWVGAAARSAAAACWAELAKTEADQSIRLFGWYRE AIQQII
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. abscessus ATCC 19977 | MAB_0920 | - | - | 100% (286) | putative repressor in the phenylacetic acid catabolism |
| M. abscessus ATCC 19977 | MAB_3858c | - | 2e-05 | 23.27% (245) | hypothetical protein MAB_3858c |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb0693 | - | 3e-08 | 25.00% (252) | hypothetical protein Mb0693 |
| M. gilvum PYR-GCK | Mflv_5085 | - | 3e-08 | 26.34% (262) | PaaX domain-containing protein, C- domain |
| M. tuberculosis H37Rv | Rv0674 | - | 3e-08 | 25.00% (252) | hypothetical protein Rv0674 |
| M. leprae Br4923 | - | - | - | - | - |
| M. marinum M | MMAR_1003 | - | 3e-11 | 27.69% (260) | putative regulatory protein |
| M. avium 104 | MAV_4498 | - | 2e-07 | 24.90% (257) | hypothetical protein MAV_4498 |
| M. smegmatis MC2 155 | MSMEG_1389 | - | 1e-06 | 25.38% (260) | hypothetical protein MSMEG_1389 |
| M. thermoresistible (build 8) | - | - | - | - | - |
| M. ulcerans Agy99 | MUL_0755 | - | 2e-11 | 27.69% (260) | putative regulatory protein |
| M. vanbaalenii PYR-1 | Mvan_1271 | - | 2e-07 | 25.40% (252) | PaaX domain-containing protein, C- domain |
CLUSTAL 2.0.9 multiple sequence alignment
Mb0693|M.bovis_AF2122/97 -------MPAMTARSVVLSVLLGAHPAWATASELIQLTADFGIKETTLRV
Rv0674|M.tuberculosis_H37Rv -------MPAMTARSVVLSVLLGAHPAWATASELIQLTADFGIKETTLRV
MMAR_1003|M.marinum_M -------MAAMTARSVVLSVLLGAHPAWASASELIRLTADFGIKETALRV
MUL_0755|M.ulcerans_Agy99 -------MAAMTARSVVLSVLLGAHPAWASASELIRLTADFGIKETALRV
MAV_4498|M.avium_104 -------MPDLTARSVVLSVLLGAHPAHARASELVRLTSDFGIKESTLRV
Mflv_5085|M.gilvum_PYR-GCK --MRRPAN-RMTARSVVLSVLLGAHPAWATAAELIRLTSDFGIRESTVRV
Mvan_1271|M.vanbaalenii_PYR-1 ----------MTARSVVLSVLLGAHPAWATAAELIRLTSDFGIRESTVRV
MSMEG_1389|M.smegmatis_MC2_155 --MTVPDVRRMTARSVVLSVMLGAHPAWASSAELIRLTSDFGIREQTLRV
MAB_0920|M.abscessus_ATCC_1997 MDIQHVLNADISTRSVVESMIR--EDATIATGELYDVANILGMSDQQVRL
:::**** *:: . * :.** :: :*: : :*:
Mb0693|M.bovis_AF2122/97 ALTRMVGAGDLVRSADGYRLSDRLLARQRRQDE----------AMRPRTR
Rv0674|M.tuberculosis_H37Rv ALTRMVGAGDLVRSADGYRLSDRLLARQRRQDE----------AMRPRTR
MMAR_1003|M.marinum_M ALTRMVSGGDLIRSADGYRLSDRLLARQARQDE----------AMRPRVR
MUL_0755|M.ulcerans_Agy99 ALTRMVSGGDLIRSADGYRLSDRLLARQARQDE----------AMRPRVR
MAV_4498|M.avium_104 ALTRMVNAGDLIRSADGYRLSDRLLARQRRQDD----------AIDPKVR
Mflv_5085|M.gilvum_PYR-GCK ALTRMVSAGDLVRSEDGYRLSGRLLARQRRQDD----------VLEPRRG
Mvan_1271|M.vanbaalenii_PYR-1 ALTRMVGAGDLVRSEDGYRLSDRLLARQRRQDD----------AITPRRH
MSMEG_1389|M.smegmatis_MC2_155 ALTRMVSAGDLVRSADGYRLSDRLMVRQRRQDD----------AIDPKVH
MAB_0920|M.abscessus_ATCC_1997 CIKRLVAEGRFTQEGRGRKAILHATGATRNTLEPDLDFVRYMYQQDRGLA
.:.*:* * : :. * : : . :
Mb0693|M.bovis_AF2122/97 AWHGNWHMLIVTSIGTDARTRAALRTCMHHKRFGELREGVWMRPDNLDLD
Rv0674|M.tuberculosis_H37Rv AWHGNWHMLIVTSIGTDARTRAALRTCMHHKRFGELREGVWMRPDNLDLD
MMAR_1003|M.marinum_M PWQGNWHLVIVTSVGTDARTRAALRTTMHDKRFAELREGVWLRPDNLDLE
MUL_0755|M.ulcerans_Agy99 PWQGNWHLVIVTSVGTDARTRAALRTTMHDKRFAELREGVWLRPDNLDLE
MAV_4498|M.avium_104 PWRGQWVTLIVTSVGDDARTRAALRNAMHDKRFGELREGVWMRPDNIDTQ
Mflv_5085|M.gilvum_PYR-GCK EWDGLWTTLVITSVGADARTRAHLRNTLQNHRFAELRDGVWMRPANVEVQ
Mvan_1271|M.vanbaalenii_PYR-1 AWDGSWTMLVITSVGTDARTRAQLRNTLQDNRFAELREGVWMRPANVDLE
MSMEG_1389|M.smegmatis_MC2_155 DHDGEWLTVVVTSVGTDARTRAWMRNTLQQYRFGELREGVWLRPDNLDQA
MAB_0920|M.abscessus_ATCC_1997 PWDGGWHLTAFAVPESARTARDAMREEIVRLGGAPIQGGLYVCANAWESR
* * .: :* :* : . :: *::: . :
Mb0693|M.bovis_AF2122/97 LES-----DVAARVRMLTARDEAP------ADLAGQLWDLSGWTEAGHRL
Rv0674|M.tuberculosis_H37Rv LES-----DVAARVRMLTARDEAP------ADLAGQLWDLSGWTEAGHRL
MMAR_1003|M.marinum_M LAA-----DVAERVRVLTARDDAP------AELAGQLWDLTEWAGVGDRL
MUL_0755|M.ulcerans_Agy99 LAA-----DVAERVRVLTARDDAP------AELAGQLWDLTGWAGVGDRL
MAV_4498|M.avium_104 LGP-----DVTDRARVITARDDDP------ADLAGRLWDLPGWARAGHRL
Mflv_5085|M.gilvum_PYR-GCK LGA-----NITEKARILQARDERP------AELATHLWDLTGWAVDGRRL
Mvan_1271|M.vanbaalenii_PYR-1 LGP-----DITEKVRILAARDDEP------AELAARLWDLPGWAATGREL
MSMEG_1389|M.smegmatis_MC2_155 LPG-----EITDRVRVLRTRDDNP------RDLAARLWDLPGWARTGELL
MAB_0920|M.abscessus_ATCC_1997 VGAAAERLGVAEHVTMFTTTDLAIGGETGARELAERLWPIDAIAERHRRL
: :: :. :: : * :** :** : : *
Mb0693|M.bovis_AF2122/97 LG----------DMAAATDMPGRFVVAAAMVRHLLTDPMLPAELLPADWP
Rv0674|M.tuberculosis_H37Rv LG----------DMAAATDMPGRFVVAAAMVRHLLTDPMLPAELLPADWP
MMAR_1003|M.marinum_M LGEMA-------EMAEAADIPGQFALAAAMVRHLLSDPMLPEELLPAKWP
MUL_0755|M.ulcerans_Agy99 LGEMA-------EMAEAAGIPGQFALAAAMVRHLLSDPMLPEELLPAKWP
MAV_4498|M.avium_104 LD----------EMAAAPDVPGRFVVAAAMVRHLLTDPVLPDELLPPDWP
Mflv_5085|M.gilvum_PYR-GCK LK----------EMDDAHDVPTRFVAAATIVRHLLTDPVLPDELLPADWP
Mvan_1271|M.vanbaalenii_PYR-1 LT----------RIADADDVPGRFVVAAAMVRHLLTDPVLPDELLATDWP
MSMEG_1389|M.smegmatis_MC2_155 LE----------AMADATDVPARFVVAAGIVRHLLVDPVLPDDLLPASWP
MAB_0920|M.abscessus_ATCC_1997 LAVAEGLLPVLRTASPTELLTLAVALAAEFTRAVEPDPLLPPQLLPQPWV
* : :. .. ** :.* : **:** :**. *
Mb0693|M.bovis_AF2122/97 GAGLRAAYHDFATAMAKRRDATQLLEVT----------
Rv0674|M.tuberculosis_H37Rv GAGLRAAYHDFATAMAKRRDATQLLEVT----------
MMAR_1003|M.marinum_M GAQLRSAYHDFATELAKRRGTNQLLEAK----------
MUL_0755|M.ulcerans_Agy99 GAQLRSAYHDFATELAKRRGTNQLLEAK----------
MAV_4498|M.avium_104 GTRLRAAYHDFAAELMARRDP-LFAEAT----------
Mflv_5085|M.gilvum_PYR-GCK GADLRAAYNDFAAEMVARRDDVKLTEAG----------
Mvan_1271|M.vanbaalenii_PYR-1 GAALRSAYNDFAAEMVARRDGVELMEAR----------
MSMEG_1389|M.smegmatis_MC2_155 GAALRAAYNDFAAELVARRDRTELMEAT----------
MAB_0920|M.abscessus_ATCC_1997 GAAARSAAAACWAELAKTEADQSIRLFGWYREAIQQII
*: *:* : : . :