For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
RDVAVVAFAQSHCTTANLHDDMAEILLPVVRDALAQADLRRTDIDFYASGSHDFFEGRTFAYIESLDAIG AWPPISESHVEMDAAWACYEAWAWLQLGHGDIALVYGVGRGSLPADLDQVMPSSLDPYYLTPLYPHRHAI AGLQAAAAIEAGITTEREMADVVNQSLTDALSNPFALKSGAPGVEALLEQPYIASPLRQHDTAAVCDGAA VLILATDQVARRLARRPAWIRAIDHRMDTHYPGSRDLAVLESARIAAEKAAVMAGFSAANVEVAELHTEY SYAEPLLTTTFGIENALVNPSGGPLAGAPATATGLIRIGESARTIMQGRATRALAHATNGPALQHNLVCL METSA*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. abscessus ATCC 19977 | MAB_0838c | - | - | 100% (356) | lipid-transfer protein |
M. abscessus ATCC 19977 | MAB_4168 | - | 5e-70 | 41.13% (355) | lipid-transfer protein |
M. abscessus ATCC 19977 | MAB_0837c | - | 3e-15 | 26.61% (387) | acetyl-CoA acetyltransferase |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3552 | - | 1e-71 | 42.30% (357) | lipid-transfer protein |
M. gilvum PYR-GCK | Mflv_1537 | - | 2e-77 | 45.10% (357) | lipid-transfer protein |
M. tuberculosis H37Rv | Rv3522 | ltp4 | 4e-71 | 42.02% (357) | lipid-transfer protein |
M. leprae Br4923 | MLBr_02564 | fadA2 | 8e-05 | 21.79% (257) | acetyl-CoA acetyltransferase |
M. marinum M | MMAR_5007 | ltp4 | 1e-69 | 40.96% (354) | lipid transfer protein or keto acyl-CoA thiolase Ltp4 |
M. avium 104 | MAV_0637 | - | 6e-69 | 42.37% (354) | lipid-transfer protein |
M. smegmatis MC2 155 | MSMEG_5922 | - | 2e-71 | 42.86% (350) | lipid-transfer protein |
M. thermoresistible (build 8) | TH_2266 | - | 8e-74 | 44.10% (356) | POSSIBLE LIPID TRANSFER PROTEIN OR KETO ACYL-COA THIOLASE LTP4 |
M. ulcerans Agy99 | MUL_4081 | ltp4 | 1e-69 | 40.96% (354) | lipid-transfer protein |
M. vanbaalenii PYR-1 | Mvan_5221 | - | 4e-74 | 43.42% (357) | lipid-transfer protein |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_1537|M.gilvum_PYR-GCK --------------------------MTD--VAVVGFAHAPHVRRTNGTT Mvan_5221|M.vanbaalenii_PYR-1 --------------------------MND--VAVVGFAHAPHVRRTDGTT TH_2266|M.thermoresistible__bu --------------------------MTERSVAVVGFAHAPHVRRTDGTT MSMEG_5922|M.smegmatis_MC2_155 ---------------------------------MVGFAHAPHVRRTDGTT Mb3552|M.bovis_AF2122/97 --------------------------MSVRDIAVVGFAHAPHVRRTDGTT Rv3522|M.tuberculosis_H37Rv --------------------------MSVRDIAVVGFAHAPHVRRTDGTT MAV_0637|M.avium_104 --------------------------MSARNVAVVGFAHAPHVRRTDGTT MMAR_5007|M.marinum_M --------------------------MSDRNVAVVGFAHAPHVRRTDGTT MUL_4081|M.ulcerans_Agy99 --------------------------MSDRNVAVVGFAHVPHVRRTDGTT MAB_0838c|M.abscessus_ATCC_199 ----------------------------MRDVAVVAFAQS-HCTTANLHD MLBr_02564|M.leprae_Br4923 MLGETRRLQVAPASSVASDKTIQRTTFAKQRVAVLGGNRIPFARSNGAYA ::. : . . Mflv_1537|M.gilvum_PYR-GCK NG--VEMLMPCFRELYSELGLEQTDIGFWCSGSSDYLAGRAFSFISAIDS Mvan_5221|M.vanbaalenii_PYR-1 NG--VEMLMPCFASIYADLGITMSDIGFWCSGSSDYLAGRAFSFISAIDS TH_2266|M.thermoresistible__bu NG--VEMLMPCFAQLYDELGISQRDIGFWCSGSSDYLAGRAFSFISAIDS MSMEG_5922|M.smegmatis_MC2_155 NG--VEMLMPCFHQLYDELGLQQSDIGFWCSGSSDYLAGRAFSFISAIDS Mb3552|M.bovis_AF2122/97 NG--VEMLMPCFAQLYDELGITKADIGFWCSGSSDYLAGRAFSFISAIDS Rv3522|M.tuberculosis_H37Rv NG--VEMLMPCFAQLYDELGITKADIGFWCSGSSDYLAGRAFSFISAIDS MAV_0637|M.avium_104 NG--VEMLMPCFAQLYQDLGITKADIGFWCSGSSDYLAGRAFSFISAIDS MMAR_5007|M.marinum_M NG--VEMLMPCFAQLYEDLGITQSDIGFWCSGSSDYLAGRAFSFISAIDS MUL_4081|M.ulcerans_Agy99 NG--VEMLMPCFAQLYEDLGITQSDIGFWCSGSSDYLAGRAFSFISAIDS MAB_0838c|M.abscessus_ATCC_199 DM--AEILLPVVRDALAQADLRRTDIDFYASGSHDFFEGRTFAYIESLDA MLBr_02564|M.leprae_Br4923 EASNQDMFSAALSGLVDRFGLAGERLDMVIGG-AVLKHSRDFNLMRECVL : ::: . . .: :.: .* .* * : Mflv_1537|M.gilvum_PYR-GCK IGAVPPIN----ESHVEMDAAWALYEAYIKILTGEVETALVYGFGK---- Mvan_5221|M.vanbaalenii_PYR-1 IGAVPPIN----ESHVEMDAAWALYEAYIKILTGEVETALVYGFGK---- TH_2266|M.thermoresistible__bu IGAVPPIN----ESHVEMDAAWALYEAYIKILTGEVDTALVYGFGK---- MSMEG_5922|M.smegmatis_MC2_155 IGAVPPIN----ESHVEMDGAWALYEAYIKILTGEVDTALVYGFGK---- Mb3552|M.bovis_AF2122/97 IGAVPPIN----ESHVEMDAAWALYEAYIKLLTGEVDTALVYGFGK---- Rv3522|M.tuberculosis_H37Rv IGAVPPIN----ESHVEMDAAWALYEAYIKLLTGEVDTALVYGFGK---- MAV_0637|M.avium_104 IGAVPPIN----ESHVEMDAAWALYEAYIKLLTGEVDTALVYGFGK---- MMAR_5007|M.marinum_M IGAVPPIN----ESHVEMDAAWALFEAYIKILTGEVDTALVYGFGK---- MUL_4081|M.ulcerans_Agy99 IGAVPPIN----ESHVEMDAAWALFEAYIKILTGEVDTALVYGFGK---- MAB_0838c|M.abscessus_ATCC_199 IGAWPPIS----ESHVEMDAAWACYEAWAWLQLGHGDIALVYGVGRG--- MLBr_02564|M.leprae_Br4923 GSQLSPYTPAFDLQQACATGLQAAIVAADGIAAGRYEVAVAGGVDTTSDV . .* . .:. . * * : *. : *:. *.. Mflv_1537|M.gilvum_PYR-GCK -----------------------------SSAGTLRRVLALQTDPYTVAP Mvan_5221|M.vanbaalenii_PYR-1 -----------------------------SSAGTLRRVLALQTDPYTVAP TH_2266|M.thermoresistible__bu -----------------------------SSAGDLRRVLALQTDPYTVAP MSMEG_5922|M.smegmatis_MC2_155 -----------------------------SSAGVLRRVLALQTDPYSVAP Mb3552|M.bovis_AF2122/97 -----------------------------SSAGTLRRVLSRQTDPYTVAP Rv3522|M.tuberculosis_H37Rv -----------------------------SSAGTLRRVLSRQTDPYTVAP MAV_0637|M.avium_104 -----------------------------SSAGVLRQILSRQTDPYTVAP MMAR_5007|M.marinum_M -----------------------------SSAGILRQILSRQTDPYTVAP MUL_4081|M.ulcerans_Agy99 -----------------------------SSAGILRQILSRQTDPYTVAP MAB_0838c|M.abscessus_ATCC_199 -----------------------------SLPADLDQVMPSSLDPYYLTP MLBr_02564|M.leprae_Br4923 PISLGDNLRRNLLKLRRSKSNVQRLKLVGALPANIGVEIPANSEPRTGLS : .. : :. . :* . Mflv_1537|M.gilvum_PYR-GCK LWPDSVSMAGLQARFGLDS---GKWTAEQMARVALDALAASPRV------ Mvan_5221|M.vanbaalenii_PYR-1 LWPDSVSMAGLQARFGLDT---GKWTAEQMAQVALDAQAAAPRV------ TH_2266|M.thermoresistible__bu LWPDSVSIAGLQARLGLDA---GKWTAEQMARVALDAMAAAPRT------ MSMEG_5922|M.smegmatis_MC2_155 LWPDAVSMAGLQARFGLDA---GKWTAEQMAQVALDAFAAGGRT------ Mb3552|M.bovis_AF2122/97 LWPDSVSMAGLQARLGLDS---GKWTHEQMARVAFDSFTNARRV------ Rv3522|M.tuberculosis_H37Rv LWPDSVSMAGLQARLGLDS---GKWTHEQMARVAFDSFTNARRV------ MAV_0637|M.avium_104 LWPDSISMAGLQARMGLDT---GKWTEEQMARVAFDSFANARRV------ MMAR_5007|M.marinum_M LWPDSVSMAGLQARLGLDS---GKWTHEQMAQVALDSFARSQRN------ MUL_4081|M.ulcerans_Agy99 LWPDSVSMAGLQARLGLDC---GKWTHEQMAQVALDSFARSQRN------ MAB_0838c|M.abscessus_ATCC_199 LYPHRHAIAGLQAAAAIEA---GITTEREMADVVNQSLTDALSNPF---- MLBr_02564|M.leprae_Br4923 MGEHAAITAKKMGIKRVDQDELAAASHRNMASAYDRGFFDDLVTPFLGLY : . * . :: . : .:** . . Mflv_1537|M.gilvum_PYR-GCK --DRLEPGNNVEELLDQ-PYF-----AEPLRRHDIAPITDGASAIVLAAG Mvan_5221|M.vanbaalenii_PYR-1 --DSLEPGNSIEELLER-PYF-----ADPLRRHDIAPITDGASAIVLASG TH_2266|M.thermoresistible__bu --DSVPPAETVDELLSR-PYF-----ADPLRRHDIAPITDGASAIVLAAG MSMEG_5922|M.smegmatis_MC2_155 --DSVKPAKSIDELLER-PFF-----ADPLRRHDIAPITDGAAAIVLAAG Mb3552|M.bovis_AF2122/97 --DSVEPPITVGELLAR-PFF-----ADPLRRHDIAPITDGAAAVVLAAD Rv3522|M.tuberculosis_H37Rv --DSVEPPITVGELLAR-PFF-----ADPLRRHDIAPITDGAAAVVLAAD MAV_0637|M.avium_104 --DNVEGSITVAELLER-PFF-----AEPLRRHDIAPITDGAAAIVLAAG MMAR_5007|M.marinum_M --DSEKPAKSIDELLAR-PFF-----NDPLRRHDIAPITDGAAAIVLAAD MUL_4081|M.ulcerans_Agy99 --DSEKPAKSIDELLAR-PFF-----NDPLRRHDIAPITDGAAAIVLAAD MAB_0838c|M.abscessus_ATCC_199 --ALKSGAPGVEALLEQ-PYI-----ASPLRQHDTAAVCDGAAVLILATD MLBr_02564|M.leprae_Br4923 RDDNLRPNSHVEKLATLRPVFGVQAGDATMTAGNSTSLTDGASVALLATE : * * : .: : :.: ***:. :**: Mflv_1537|M.gilvum_PYR-GCK DRARELRERP-AWITGIEHRIETPVLGARDLTTSPSTAASAAAAT---NG Mvan_5221|M.vanbaalenii_PYR-1 DRARELRERP-AWITGFEHRIETPVLGARDLTTSPSTAASAQAAA---GG TH_2266|M.thermoresistible__bu DRARELRENP-AWITGIEHRIETPVLGARDLTTSPSTAASAQAAT---GG MSMEG_5922|M.smegmatis_MC2_155 DRARELRENP-AWITGIEHRIDTPVLGARDLTTSPSTAASAAAAT---GG Mb3552|M.bovis_AF2122/97 NRARELRENP-AWITGIEHRIESPALGARDITESPSTKLAAKIAT---GG Rv3522|M.tuberculosis_H37Rv NRARELRENP-AWITGIEHRIESPALGARDITESPSTKLAAKIAT---GG MAV_0637|M.avium_104 DRARELRENP-AWITGIEHRIESPALGVRDLTESPSTKAAAEIAT---GG MMAR_5007|M.marinum_M DRARELRESP-AWITGFEHRIESPSLGVRDLTVSPSTAVSAKAAS---GG MUL_4081|M.ulcerans_Agy99 DCARELRESP-AWITGFEHRIESPSLGVRDLTVSPSTAVSAKAAS---GG MAB_0838c|M.abscessus_ATCC_199 QVARRLARRP-AWIRAIDHRMDTHYPGSRDLAVLESARIAAEKAAVMAGF MLBr_02564|M.leprae_Br4923 QWVAAHSLTPFAYWVDAEIAAVDYVSGNDGLLMAPTYAVPRLLARN--GL : . * *: : * .: : . * . Mflv_1537|M.gilvum_PYR-GCK DPGSIEIAELYAPFS----------------HQQLILTEAIGLGENTTIN Mvan_5221|M.vanbaalenii_PYR-1 DTASIEIAELYAPFS----------------HQQLILKEAIGLPDSTRIN TH_2266|M.thermoresistible__bu DAGSIEVAELHAPFS----------------HQQLILTEAIGLGSGTKVN MSMEG_5922|M.smegmatis_MC2_155 DTASIEVAEIHAPFT----------------HQHLILTEAIGLGGSTKIN Mb3552|M.bovis_AF2122/97 HTGDIDVAEIHGPFT----------------HQHLIVAEAIRIPGKTKVN Rv3522|M.tuberculosis_H37Rv HTGDIDVAEIHGPFT----------------HQHLIVAEAIRIPGKTKVN MAV_0637|M.avium_104 RTDNLDVVEICAPFT----------------HQHLIIAEAIRIPGPTKVN MMAR_5007|M.marinum_M DTG-IDVAEIHAPFT----------------HQHLIIAEAIGLTDKTKVN MUL_4081|M.ulcerans_Agy99 DTG-IDVAEIHAPFT----------------HQHLIIAEAIGLTDKTKVN MAB_0838c|M.abscessus_ATCC_199 SAANVEVAELHTEYS----------------YAEPLLTTTFGIEN-ALVN MLBr_02564|M.leprae_Br4923 SFQDFDFYEIHEAFASVVLAHLQAWESEEYCRQCLGLDTALGPIDRSKLN .:. *: :: : :: : :* Mflv_1537|M.gilvum_PYR-GCK PSGGALAA-NPMFSAGLERIGLAARHIFEGNASR-----VLAHATSGPAL Mvan_5221|M.vanbaalenii_PYR-1 PSGGALAA-NPMFSAGLERIGFAARHIFDGNASR-----VLAHATSGPAL TH_2266|M.thermoresistible__bu PSGGALSA-NPMFSAGLERIGFAARHIFDGSAQR-----VLAHATSGPAL MSMEG_5922|M.smegmatis_MC2_155 PSGGALAA-NPMFSAGLERIGFAARHIFDGSAGR-----VLAHATSGPAL Mb3552|M.bovis_AF2122/97 PSGGPLAA-NPMFAAGLERIGFAAQHIWDGSARR-----VLAHATSGPAL Rv3522|M.tuberculosis_H37Rv PSGGPLAA-NPMFAAGLERIGFAAQHTWDGSARR-----VLAHATSGPAL MAV_0637|M.avium_104 PSGGALAA-NPMFVAGLERIGFAAQHIWDGSAER-----VLAHATSGPAL MMAR_5007|M.marinum_M PSGGALAA-NPMFVAGLERIGFAARHIWDGSAGR-----VLAHATSGPAL MUL_4081|M.ulcerans_Agy99 PSGGALAA-NPMFVAGLERIGFAARHIWDGSAGR-----VLAHATSGPAL MAB_0838c|M.abscessus_ATCC_199 PSGGPLAG-APATATGLIRIGESARTIMQGRATR-----ALAHATNGPAL MLBr_02564|M.leprae_Br4923 VNGSSLAAGHPFAATGGRILVQTAKQLAEQKATQKGCGPMRALISVCAAG .*..*:. * :* : :*: : * : * : .* Mflv_1537|M.gilvum_PYR-GCK QQNLVAVLEGKN Mvan_5221|M.vanbaalenii_PYR-1 QQNLVAVLEGQS TH_2266|M.thermoresistible__bu QQNLVAVLEGK- MSMEG_5922|M.smegmatis_MC2_155 QQNLVAVLEGKN Mb3552|M.bovis_AF2122/97 QQNLVAVMEGRG Rv3522|M.tuberculosis_H37Rv QQNLVAVMEGRG MAV_0637|M.avium_104 QQNLVAVMEGKN MMAR_5007|M.marinum_M QQNLVAVMEGNN MUL_4081|M.ulcerans_Agy99 QQNLVAVMEGNN MAB_0838c|M.abscessus_ATCC_199 QHNLVCLMETSA MLBr_02564|M.leprae_Br4923 GQGVAVILEA-- :.:. ::*