For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
DNAEANARMRETLARLAPGTPLRDGLERILRGRTGALIVLGYDDKVESICDGGFSLDVAFAPTRLRELSK MDGAVVLSTDGSRIVRANVQLVPDPSIPTDESGTRHRSAERTAIQTDYPVVSVSHSMNIVSVYTAGIRHV VMDSATVMSRVNQAVSTLERYKTRLDEVTSSLSTAEIEDFVTLRDVMTVAQRLELVRRISQDIELDVIEL GTDGRQLKLQIGELVGDNDTERELLVRDYHANPEPPTQAQIASTLEDLDALSDTDLLDLTVLSRTFGYPS TVEAQDTAMSSRGYRAMTHIPRLQFAHIDRLVRAFGSLQGLLAASATDLQSVEGIGAMWARHIREGLSRL AESTLTEQTG*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. abscessus ATCC 19977 | MAB_0562c | - | - | 100% (361) | DNA integrity scanning protein DisA |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3617 | - | 1e-157 | 77.31% (357) | DNA integrity scanning protein DisA |
M. gilvum PYR-GCK | Mflv_1441 | - | 1e-162 | 80.00% (350) | DNA integrity scanning protein DisA |
M. tuberculosis H37Rv | Rv3586 | - | 1e-156 | 77.31% (357) | DNA integrity scanning protein DisA |
M. leprae Br4923 | - | - | - | - | - |
M. marinum M | MMAR_5086 | - | 1e-153 | 76.57% (350) | putative RuvA-like protein |
M. avium 104 | MAV_0567 | - | 1e-154 | 76.79% (349) | DNA integrity scanning protein DisA |
M. smegmatis MC2 155 | MSMEG_6080 | - | 1e-163 | 80.79% (354) | DNA integrity scanning protein DisA |
M. thermoresistible (build 8) | TH_0588 | - | 1e-162 | 79.94% (354) | CONSERVED HYPOTHETICAL PROTEIN |
M. ulcerans Agy99 | MUL_4162 | - | 1e-152 | 76.00% (350) | DNA integrity scanning protein DisA |
M. vanbaalenii PYR-1 | Mvan_5343 | - | 1e-165 | 81.25% (352) | DNA integrity scanning protein DisA |
CLUSTAL 2.0.9 multiple sequence alignment MSMEG_6080|M.smegmatis_MC2_155 MAVKSG-ARSGRNVVHLARPTLRETLGRLAPGTPLRDGLERILRGRTGAL TH_0588|M.thermoresistible__bu MAVTSG-KRAGRTVVSLARPTMRETLGRLAPGTPLRDGLERILRGRTGAL Mflv_1441|M.gilvum_PYR-GCK MAVKSSAGRSTRTVVPMTRPTLRETIARLAPGTPLRDGLERILRGRTGAL Mvan_5343|M.vanbaalenii_PYR-1 MAVKSSSARAARTVVPLVRPTLRETIARLAPGTPLRDGLERILRGRTGAL Mb3617|M.bovis_AF2122/97 -------------MHAVTRPTLREAVARLAPGTGLRDGLERILRGRTGAL Rv3586|M.tuberculosis_H37Rv -------------MHAVTRPTLREAVARLAPGTGLRDGLERILRGRTGAL MMAR_5086|M.marinum_M -------------MHAVNRPTLREAVARLAPGTGLRDGLERILRGRTGAL MUL_4162|M.ulcerans_Agy99 -------------MHAVNRPTLREAVARLAPGTGLRDGLERILRGRTGAL MAV_0567|M.avium_104 ----------------MTRPTLRETVARLAPGTGLRDGLERILRGRTGAL MAB_0562c|M.abscessus_ATCC_199 ------------MDNAEANARMRETLARLAPGTPLRDGLERILRGRTGAL .. :**::.****** **************** MSMEG_6080|M.smegmatis_MC2_155 IVLGYDDSVEAICDGGFVLDVRYAPTRLRELSKMDGAVVLSSDGSRILRA TH_0588|M.thermoresistible__bu IVLGYDDSVEAICDGGFPLDVRYAPTRLRELSKMDGAIVLSSDGSRILRA Mflv_1441|M.gilvum_PYR-GCK IVIGYDDSVETICDGGFSLDVRYAPTRLRELSKMDGAVVLSSDGSRILRA Mvan_5343|M.vanbaalenii_PYR-1 IVIGYDDSVETICDGGFSLDVRYAPTRLRELSKMDGAVVLSSDGSRILRA Mb3617|M.bovis_AF2122/97 IVLGHDENVEAICDGGFSLDVRYAATRLRELCKMDGAVVLSTDGSRIVRA Rv3586|M.tuberculosis_H37Rv IVLGHDENVEAICDGGFSLDVRYAATRLRELCKMDGAVVLSTDGSRIVRA MMAR_5086|M.marinum_M IVLGHDENVEAICDGGFPLDVRYAPTRLRELCKMDGAVVLSTDGSRFIRA MUL_4162|M.ulcerans_Agy99 IVLGHDENVEAICDGGFPLDVRYAPTRLRELCKMDGAVVLSTDGSRFIRA MAV_0567|M.avium_104 IVLGNDENVEAICDGGFALDVRYAPTRLRELAKMDGAVVLSTDGSRIVRA MAB_0562c|M.abscessus_ATCC_199 IVLGYDDKVESICDGGFSLDVAFAPTRLRELSKMDGAVVLSTDGSRIVRA **:* *:.**:****** *** :*.******.*****:***:****::** MSMEG_6080|M.smegmatis_MC2_155 NVQLVPDPSIPTDESGTRHRSAERTAIQTGYPVISVSHSMSIVTVYVAGE TH_0588|M.thermoresistible__bu NVQLVPDPSIPTDESGTRHRSAERTAIQTGYPVISVSHSMSIVTVYVAGE Mflv_1441|M.gilvum_PYR-GCK NVQLVPDPSIPTEESGTRHRSAERTAIQTGYPVISVSHSMSIVTVYVAGE Mvan_5343|M.vanbaalenii_PYR-1 NVQLVPDPSIPTEESGTRHRSAERTAIQTGYPVISVSHSMSIVTVYVAGE Mb3617|M.bovis_AF2122/97 NVQLVPDPSIPTDESGTRHRSAERAAIQTGYPVISVSHSMNIVTVYVRGE Rv3586|M.tuberculosis_H37Rv NVQLVPDPSIPTDESGTRHRSAERAAIQTGYPVISVSHSMNIVTVYVRGE MMAR_5086|M.marinum_M NVQLVPDPSIPTDESGTRHRSAERAAIQTGYPVISVSHSMNIVTVYVGGE MUL_4162|M.ulcerans_Agy99 NVQLVPDPSIPTDESGTRHRSAERAAIQTGYPVISVSHSMNIVTVYVGGE MAV_0567|M.avium_104 NVQLVPDPSIATDESGTRHRSAERAAIQTGYPVISVSHSMNIVTVYVGGE MAB_0562c|M.abscessus_ATCC_199 NVQLVPDPSIPTDESGTRHRSAERTAIQTDYPVVSVSHSMNIVSVYTAGI **********.*:***********:****.***:******.**:**. * MSMEG_6080|M.smegmatis_MC2_155 RHVVPDSATILSRANQTIATLERYKGRLDEVSRQLSTAEIEDFVTLRDVM TH_0588|M.thermoresistible__bu RHVMPDSATILSRANQTIATLERYKTRLDEVLRQLSAAEIEDFVTLRDVM Mflv_1441|M.gilvum_PYR-GCK RHVVPESATILSRANQTIDTLERYKTRLEEVSRQLSTAEIEDFVTLRDVM Mvan_5343|M.vanbaalenii_PYR-1 RHVVPESATILSRANQTIDTLERYKTRLDEVSRQLSMAEIEDFVTLRDVM Mb3617|M.bovis_AF2122/97 RHVLTDSATILSRANQAIATLERYKTRLDEVSRQLSRAEIEDFVTLRDVM Rv3586|M.tuberculosis_H37Rv RHVLTDSATILSRANQAIATLERYKTRLDEVSRQLSRAEIEDFVTLRDVM MMAR_5086|M.marinum_M RHVLSDSATILSHANQAIATLERYKTRLDEVSRQLSRAEIEDFVTLRDVM MUL_4162|M.ulcerans_Agy99 RHVLSDSATILSHANQAIATLERYKTRLDEVSRQLSRAEIEDFVTLRDVM MAV_0567|M.avium_104 RHVVADSATILSRANQAIATLERYKIRLDEVSRQLSRAEIEDFVTLRDVL MAB_0562c|M.abscessus_ATCC_199 RHVVMDSATVMSRVNQAVSTLERYKTRLDEVTSSLSTAEIEDFVTLRDVM ***: :***::*:.**:: ****** **:** .** ************: MSMEG_6080|M.smegmatis_MC2_155 TVVQRLEMVRRISLEIDADVVELGTDGRQLKLQLDELVGDNETARELIVR TH_0588|M.thermoresistible__bu TVVQRLEMVRRISLEIDADVVELGTDGRQVKLQLEELVGDNDTARELIVR Mflv_1441|M.gilvum_PYR-GCK TVVQRLEMVRRISLELDSDVVELGTDGRQLKLQLDELVGDNDVDRELIVR Mvan_5343|M.vanbaalenii_PYR-1 TVVQRLEMVRRISLEIDSDVVELGTDGRQLKLQLDELVGDNDTDRELLVR Mb3617|M.bovis_AF2122/97 TVVQRLELVRRIGLVIDYDVVELGTDGRQLRLQLDELLGGNDTARELIVR Rv3586|M.tuberculosis_H37Rv TVVQRLELVRRIGLVIDYDVVELGTDGRQLRLQLDELLGGNDTARELIVR MMAR_5086|M.marinum_M TVVQRLELVRRIGIEIDNDVVELGTDGRQLRLQLEELLGDNETARELIVR MUL_4162|M.ulcerans_Agy99 TVVQRLELVRRIGIEIDNDVVELGTDGRQLRLQLEELLGDNETARELIVR MAV_0567|M.avium_104 TVVQRLELVRRIGQVIDNDVVELGTDGRQLRLQLDELLGGNDNARELIVR MAB_0562c|M.abscessus_ATCC_199 TVAQRLELVRRISQDIELDVIELGTDGRQLKLQIGELVGDNDTERELLVR **.****:****. :: **:********::**: **:*.*: ***:** MSMEG_6080|M.smegmatis_MC2_155 DYHANPDPPTAAQVAATLEELDSLSDSELLDFTVLARVFGYPSTAEAQDS TH_0588|M.thermoresistible__bu DYHANPDPPDAAQIAATLDDLDSLSDNELLDFTVLAAVFGYPSTPEAQDS Mflv_1441|M.gilvum_PYR-GCK DYHANPDPPTSAQVTATLEELDSLSDNELLAFTTLARVFGYPSTAEAQDS Mvan_5343|M.vanbaalenii_PYR-1 DYHANPDPPTSAQVTATLEELDALSDSELLDFTTLARVFGYPSTAEAQDS Mb3617|M.bovis_AF2122/97 DYHANPEPPSTGQINATLDELDALSDGDLLDFTALAKVFGYPTTTEAQDS Rv3586|M.tuberculosis_H37Rv DYHANPEPPSTGQINATLDELDALSDGDLLDFTALAKVFGYPTTTEAQDS MMAR_5086|M.marinum_M DYYANHEPLATAQITATLDELDAITDTELLDFNALAKIFGYPSTTEAQDS MUL_4162|M.ulcerans_Agy99 DYYANHEPLATAQITATLDELDAITDTELLDFNALAKIFGYPSTTEAQDS MAV_0567|M.avium_104 DYHASPEPLSEAQMTATLDELDALSDTELLDFTALAKVFGYPTTTEAQDS MAB_0562c|M.abscessus_ATCC_199 DYHANPEPPTQAQIASTLEDLDALSDTDLLDLTVLSRTFGYPSTVEAQDT **:*. :* .*: :**::**:::* :** :..*: ****:* ****: MSMEG_6080|M.smegmatis_MC2_155 AMSSRGYRAMAAIPRLQFAHVDLLVRSFGSLQNLLAASADDLQSVDGIGS TH_0588|M.thermoresistible__bu AVSSRGYRAMAGIPRLQFAHVELLVRSFGSLQDLLAASAADLQSVEGIGS Mflv_1441|M.gilvum_PYR-GCK AMSSRGYRAMAGIPRLQFAHVDLLVRNFGSLQGLLAASASDLQSVDGIGS Mvan_5343|M.vanbaalenii_PYR-1 AMSSRGYRAMSGIPRLQFAHVDLLVRNFGSLQGLLAATATDLQSVDGIGS Mb3617|M.bovis_AF2122/97 ALSPRGYRAMAGIPRLQFAHADLLVRAFGTLQGLLAASAGDLQSVDGIGA Rv3586|M.tuberculosis_H37Rv TLSPRGYRAMAGIPRLQFAHADLLVRAFGTLQGLLAASAGDLQSVDGIGA MMAR_5086|M.marinum_M ALSPRGYRAMSGIPRLQFSHTDLLVRAFGSLQGLLAASASDLQSVEGIGA MUL_4162|M.ulcerans_Agy99 ALSPRGYRAMSGIPRLQFSHTDLLVRAFGSLHGLLAASASDLQSVEGIGS MAV_0567|M.avium_104 AVSPRGYRALAGIPRLQFAHADLLVRSFGTLQNVLAASASDLQSIDGIGA MAB_0562c|M.abscessus_ATCC_199 AMSSRGYRAMTHIPRLQFAHIDRLVRAFGSLQGLLAASATDLQSVEGIGA ::*.*****:: ******:* : *** **:*:.:***:* ****::***: MSMEG_6080|M.smegmatis_MC2_155 MWARHIREGLSLLAESTIADRLA TH_0588|M.thermoresistible__bu MWARHIREGLSQLAESTIADRLA Mflv_1441|M.gilvum_PYR-GCK MWARHIREGLSQLAESTIADRLA Mvan_5343|M.vanbaalenii_PYR-1 MWARHIREGLSQLAESTIADRLG Mb3617|M.bovis_AF2122/97 MWARHVRDGLSQLAESTISDQ-- Rv3586|M.tuberculosis_H37Rv MWARHVREGLSQLAESTISDQ-- MMAR_5086|M.marinum_M TWAPHVREGLSQLAESTIADQ-- MUL_4162|M.ulcerans_Agy99 TWAPHVREGLSQLAESTIADQ-- MAV_0567|M.avium_104 MWARHVREGLSQLAESTITDSLS MAB_0562c|M.abscessus_ATCC_199 MWARHIREGLSRLAESTLTEQTG ** *:*:*** *****:::