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M. abscessus ATCC 19977 MAB_0552c (-)

annotation: lipoprotein LpqF
coordinates: 553948 - 555288
length: 446

NEGSLRARMTRAVSVCTVAAVTLALGGTAGCGIKLRQVPHGDVDTSTPPGLRSQQLIDMLNSNWPIGKQG
VATMAAANKVDDYTEIMTKLWVDRPYKVSSVDLGANSSTVHLIAPYGANVDIGLRTNDKGDVDRLVPYQQ
PPTIANWSDVDAALSASGGRYSYRASKIVDGQCQQIAGTNTSQAMPLASVFKLYVLLAAGTAINAGTLRW
DDQLTVTDRGKALGSSMDKLPTGSTVSVRTAAQKMISVSDNMGTDMLINRVGRHAIEKALADAGHHDPAS
MTPFPTMHELFNIGWGIPDVRQQWKDATTPEQRGRMLAEADTHDYKLDPDRTTTPASKYGIEWYGSAEDI
CRVHAALQKVAVGPAAPVRDILAAEPGIDLHSENWRYIGAKGGNLPGDLTFSWYAEDRTRQPYVVSFQLN
WDRAFGPGAAGWVIGLAKGVFKKLG*
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. abscessus ATCC 19977MAB_0552c--100% (446)lipoprotein LpqF

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb3624lpqF1e-14056.09% (435) lipoprotein LpqF
M. gilvum PYR-GCKMflv_1434-1e-13453.55% (437) beta-lactamase
M. tuberculosis H37RvRv3593lpqF1e-14156.55% (435) lipoprotein LpqF
M. leprae Br4923MLBr_01923lpqF1e-13855.66% (433) probale secreted protein
M. marinum MMMAR_5092lpqF1e-14659.28% (442) lipoprotein LpqF
M. avium 104MAV_0561-1e-14058.91% (404) LpqF protein
M. smegmatis MC2 155MSMEG_6087-1e-14156.38% (431) beta-lactamase
M. thermoresistible (build 8)TH_0594lpqF1e-13653.62% (442) PROBABLE CONSERVED LIPOPROTEIN LPQF
M. ulcerans Agy99MUL_4168lpqF1e-14560.14% (429) lipoprotein LpqF
M. vanbaalenii PYR-1Mvan_5353-1e-13354.11% (438) beta-lactamase

CLUSTAL 2.0.9 multiple sequence alignment


MLBr_01923|M.leprae_Br4923          MPQPARRTNQRPPRH-RTVALAATAALVVTMAPGCAHSASPYANTADPGL
MAV_0561|M.avium_104                -------------------MLSAAAALVATLAPGCASSPSPQANAANPGR
Mb3624|M.bovis_AF2122/97            -MGPARLHNRRAGR--RMLALSAAAALIVALASGCSSAPTPSANAANHGH
Rv3593|M.tuberculosis_H37Rv         -MGPARLHNRRAGR--RMLALSAAAALIVALASGCSSAPTPSANAANHGH
MMAR_5092|M.marinum_M               MQGTRRLTSRRRNRLRRATVLTAAAAMVLTLTPGCSSSPTPSANAANPQR
MUL_4168|M.ulcerans_Agy99           -------------------MLTAAAALVLTLTPGCSSSPTPSANAANPQR
Mflv_1434|M.gilvum_PYR-GCK          -MRGLTPTPEAARARR-GATVVVALLSVVALACGCAATRPAPADAAY-GA
Mvan_5353|M.vanbaalenii_PYR-1       -MRGLTPRRYAGRARRRATTAAVALVCVASLACGCAATRPAPADAAY-GA
MSMEG_6087|M.smegmatis_MC2_155      ------------------------MAVVAALACGCSERSAPAAEVSY-GA
TH_0594|M.thermoresistible__bu      -LPEAAPTSNARRSRR-LIGLLAAAVLTAASAGACADRGTPPADAAY-GT
MAB_0552c|M.abscessus_ATCC_199      -------MNEGSLRARMTRAVSVCTVAAVTLALGGTAGCGIKLRQVP-HG
                                                                 : : . :              

MLBr_01923|M.leprae_Br4923          RIDTRTPPGVRAQQIIDMLNSDWPIGLVGVRTFASHDMVEIVKTTLEELW
MAV_0561|M.avium_104                QIDTRTPPGIRAQQTLDMLNSDWPIGPVGVRTLAAADKVESVQTTLEALW
Mb3624|M.bovis_AF2122/97            RIDTRTPPGLRAQQTMDMLNSDWPIGEIGVGTLAAPGQVDTVKTTMEALW
Rv3593|M.tuberculosis_H37Rv         RIDTRTPPGLRAQQTMDMLNSDWPIGEIGVGTLAAPGQVDTVKTTMEALW
MMAR_5092|M.marinum_M               RIDTVTPPGLRAQQTMDMLNSDWPIGPAGVATLAAPSKVDSVEATMEGLW
MUL_4168|M.ulcerans_Agy99           RIDTVTPPGLRAQQTMDMLNSDWPIGPAGVATLAAPSKVDSVEATMEGLW
Mflv_1434|M.gilvum_PYR-GCK          PIQINTPQGLRAKQTMDMLNSDWPIGEVGVRTLAAPDLVEHVGVTLDRIW
Mvan_5353|M.vanbaalenii_PYR-1       PIQINTPQGLRAKQTMDMLNSDWPIGEVGVRTLAAPEAVEHVGVTLDRIW
MSMEG_6087|M.smegmatis_MC2_155      HIDTNTPPGLRAKQTMDMLNSDWPIGPVSVGTLASPEKIDDVGVKMDTIW
TH_0594|M.thermoresistible__bu      HIPTGTPQGLRAKQTMDMLNSDWPIGEPSVSTLAAPEHVAEVTESMETLW
MAB_0552c|M.abscessus_ATCC_199      DVDTSTPPGLRSQQLIDMLNSNWPIGKQGVATMAAANKVDDYTEIMTKLW
                                     :   ** *:*::* :*****:****  .* *:*:   :      :  :*

MLBr_01923|M.leprae_Br4923          WDRPFTLEGVDIGASVATLHLISSYGAQQDIRIHTDGNSWVDRFDLNTQP
MAV_0561|M.avium_104                WDRPFTLNGVDIGASVATLHLTSSYGARQDIRIHTDDGGWVDRFDLDTRA
Mb3624|M.bovis_AF2122/97            WDRPFALAGVDIGASVAALHLISSYGAQQDIRIHTDDDGWVDRFDVETQA
Rv3593|M.tuberculosis_H37Rv         WDRPFALAGVDIGASVAALHLISSYGAQQDIRIHTDDDGWVDRFDVETQA
MMAR_5092|M.marinum_M               WDRPFALDSVDISASVATLHLTSSYGARQDIRLHTDDGGWVDRFELETLP
MUL_4168|M.ulcerans_Agy99           WDRPFALDSVDISASVATLHLTSSYGARQDIRLHTDDGGWVDRFELATLP
Mflv_1434|M.gilvum_PYR-GCK          WDRPFTLTDVDVGAGWATLDVQTSYGVAQTIRLRTDEQGLVDRFSVDLVP
Mvan_5353|M.vanbaalenii_PYR-1       WDRPFTVTNVDVGAGHAKLDVLTSYGVAQTIELRTDEAGMVDRFQVQLVP
MSMEG_6087|M.smegmatis_MC2_155      WDRPFKVTSVEIGAGQATLHVLTSYNVAQNIELRTNDAGLVDRFEVNLEP
TH_0594|M.thermoresistible__bu      WDRPITLTAVDIGAGTATLRVRNSYGAEQDIELRVDDESLVDQFEVTLRP
MAB_0552c|M.abscessus_ATCC_199      VDRPYKVSSVDLGANSSTVHLIAPYGANVDIGLRTNDKGDVDRLVPYQQP
                                     ***  :  *::.*. : : :  .*..   * ::.:  . **::     .

MLBr_01923|M.leprae_Br4923          P-SITSWYDIDAALSKTGARYSYQVAKVD-----NGRCDPVQGTNTAESL
MAV_0561|M.avium_104                P-TVNSWHDVDAVLSKTGARYSYQAAKVDP----QGRCEPVAGTNTGESL
Mb3624|M.bovis_AF2122/97            P-SIASWRDVDAVLSKTGARYSFQVAKVD-----NGRCDPVAGTSTGESL
Rv3593|M.tuberculosis_H37Rv         P-SIASWRDVDAALSKTGARYSFQVAKVD-----NGRCDPVAGTNTGESL
MMAR_5092|M.marinum_M               PPTITAWRDVDAVLSKTGARYSYQVSKVE-----KGQCTRVAGTNTNQPL
MUL_4168|M.ulcerans_Agy99           PPTITAWRDVDAVLSKTGARYSYQVSKVE-----KGQCTRVAGTNTNQPL
Mflv_1434|M.gilvum_PYR-GCK          P-EIDEWSDIDEQLTASGARYSYQVAKVDD-----GRCVKVAGSNTDLSL
Mvan_5353|M.vanbaalenii_PYR-1       P-KIATWSDIDEQLTKSGARYSYQVAKVTD-----GQCVKVAGTNTDTSL
MSMEG_6087|M.smegmatis_MC2_155      P-VINGWSDIDKEIAKTGARYSYQVSKVRPGAEATDACEVVAGTNTDLSL
TH_0594|M.thermoresistible__bu      P-TIENWADIDTELTESGARYSYQVSRVLP-APGGRRCEPIAGANTDLSL
MAB_0552c|M.abscessus_ATCC_199      P-TIANWSDVDAALSASGGRYSYRASKIVD-----GQCQQIAGTNTSQAM
                                    *  :  * *:*  :: :*.***::.:::         *  : *:.*  .:

MLBr_01923|M.leprae_Br4923          PLASIFKLYVLHALAYAVRNGTVSWDDQLTVTDKSRAVGSSGL-ELPIGE
MAV_0561|M.avium_104                PLASIFKLYVLHALAGAVTAGRVSWDDQLTVTDKSRAVGSSGL-ALPAGA
Mb3624|M.bovis_AF2122/97            PLASIFKLYVLHALAGAVQHNTVSWDDLLTVTAKSKAVGSSGL-ELPVGA
Rv3593|M.tuberculosis_H37Rv         PLASIFKLYVLHALAGAVQHNTVSWDDLLTVTAKSKAVGSSGL-ELPVGA
MMAR_5092|M.marinum_M               PLASIFKLYVLHALADAIKSGTASWDDQLTVTAKSKAVGSSGL-ELSPGD
MUL_4168|M.ulcerans_Agy99           PLASIFKLYVLHALADAIKSGTASWDDQLTVTAKSKAVGSSGL-ELSPGD
Mflv_1434|M.gilvum_PYR-GCK          PLASIFKLYVLLAVADAVKAGTLQWSDPLTITEEAKAVGSSGFDELEPGA
Mvan_5353|M.vanbaalenii_PYR-1       PLASIFKLYVLFAVAEAVKADTLEWTDALTITEGAKAVGSSAFDELEPGA
MSMEG_6087|M.smegmatis_MC2_155      PLASIFKLYVLLAVSDAIKEGTLSWDDKLTITKDGKALGSAGLDKLPPGA
TH_0594|M.thermoresistible__bu      PLASIFKLYVLLAVAEAVRAGTLDWDDRLTVTERAKAVGSAALDHLPPGA
MAB_0552c|M.abscessus_ATCC_199      PLASVFKLYVLLAAGTAINAGTLRWDDQLTVTDRGKALG-SSMDKLPTGS
                                    ****:****** * . *:  .   * * **:*  .:*:* :.:  *  * 

MLBr_01923|M.leprae_Br4923          HVSVRTAAEKMIATSDNMATDLLIGKMGTHAVEEALVTAGHHDPASMTPF
MAV_0561|M.avium_104                QVSVRTAAEKMIATSDNMATDLLIDKLGTHAIEEALATAGHHDPSSMTPF
Mb3624|M.bovis_AF2122/97            RVSVRTAAEKMIATSDNMATDLLIERLGTRAIEEALASAGHHDPASMTPF
Rv3593|M.tuberculosis_H37Rv         RVSVRTAAEKMIATSDNMATDLLIERLGTRAIEEALASAGHHDPASMTPF
MMAR_5092|M.marinum_M               HVSVRRAAEKMIANSDNMATDLLIGRLGKHAIEQALATAGHHDPASMTPF
MUL_4168|M.ulcerans_Agy99           HVSVRRAAEKMIANSDNMATDLLIGRLGKHAIEQALATAGHHDPASMTPF
Mflv_1434|M.gilvum_PYR-GCK          TVTVREASQQMISASDNMATDLLIERLGPGAIERALAEAGHHDPASMTPF
Mvan_5353|M.vanbaalenii_PYR-1       TVSVREAAQQMISASDNMATDLLIERLGPGAIERALVAAGHHDPASMTPF
MSMEG_6087|M.smegmatis_MC2_155      QITVRTAAQQMISASDNMATDLLIGRVGTGAVERALVTAGHHDPASMTPF
TH_0594|M.thermoresistible__bu      QISVREAAQQMISASDNMTTDLLIGRLGTDAVERALVAAGHHDPASMTPF
MAB_0552c|M.abscessus_ATCC_199      TVSVRTAAQKMISVSDNMGTDMLINRVGRHAIEKALADAGHHDPASMTPF
                                     ::** *:::**: **** **:** ::*  *:*.**. ******:*****

MLBr_01923|M.leprae_Br4923          PTMYELFSVGWGQPDLRSQWKQAS-QQLRAQLLQQANSTPYQPDPTRAHT
MAV_0561|M.avium_104                PTMYELFSVGWGRPDLRSQWEHGS-PQVRARLLAQANSTPYDPDPMRAHS
Mb3624|M.bovis_AF2122/97            PTMYELFSVGWGKPDLRDQWKHAT-QQVRAQILRQTNSTPYQPDPTRAHT
Rv3593|M.tuberculosis_H37Rv         PTMYELFSVGWGKPDLRDQWKHAT-QQVRAQILRQTNSTPYQPDPTRAHT
MMAR_5092|M.marinum_M               PTMYELFSVGWGQPDLREQWKQAS-AQQRAALLEQADSTPYRPDPTRAHT
MUL_4168|M.ulcerans_Agy99           PTMYELFSVGWGQPDLREQWKQAS-AQQRAALLEQADSTPYRPDPTRAHT
Mflv_1434|M.gilvum_PYR-GCK          PTMHELFSVGWGTPDLREQWKKAS-PEGRAQLLQQTNSRPYEPDPKRTHM
Mvan_5353|M.vanbaalenii_PYR-1       PTMHELFSVGWGTPDLREQWKRAT-REGRAQLLQQTNSRPYEPDPKRTHL
MSMEG_6087|M.smegmatis_MC2_155      PTMHQVFSVGWGEPNLREQWKNAS-REDRIKLLQQTDSRPYQPDPNRTHS
TH_0594|M.thermoresistible__bu      PTMHELFSVGWGEPDLREQWQHAS-PQDRAELLRQVSSRPYRPDPQRTHT
MAB_0552c|M.abscessus_ATCC_199      PTMHELFNIGWGIPDVRQQWKDATTPEQRGRMLAEADTHDYKLDPDRTTT
                                    ***:::*.:*** *::*.**: .:  : *  :* :..:  *  ** *:  

MLBr_01923|M.leprae_Br4923          PASNYGAEWYGSAEDICRIHAALQADAIGQAAPVRQILSAVAGIQLDRSK
MAV_0561|M.avium_104                PASSYGAEWYGNAQDICRVHAALQADAVGKAAPVRDILSAVSGIQLDPAV
Mb3624|M.bovis_AF2122/97            PASNYGAEWYGSAEDICRVHAALRADAVGPASPVRQIMSAVPGIQLDRSV
Rv3593|M.tuberculosis_H37Rv         PASNYGAEWYGSAEDICRVHAALRADAVGPASPVRQIMSAVPGIQLDRSV
MMAR_5092|M.marinum_M               PASNYGAEWYGSAEDICRVHLALQADAVGPAAPVRKILSAVAGIALDRNY
MUL_4168|M.ulcerans_Agy99           PASNYGAEWYGSAEDICRVHLALQADAVGPAAPVRKILSAVAGIALDRNY
Mflv_1434|M.gilvum_PYR-GCK          PASEYGAEWYGSAADICRLHAALQRSAVGEAAPVKDILSFLPGIDLDRAE
Mvan_5353|M.vanbaalenii_PYR-1       PASDIGAEWYGSAADICRLHAALQKGAVGEAAPVRDILSAVPGIDLDRDE
MSMEG_6087|M.smegmatis_MC2_155      PGSTDGLEWYGSAQDICRVHAALQASAVGPAAPVKDILSALPGIDLDPAK
TH_0594|M.thermoresistible__bu      PASNYGAEWFGTAKDICRVHIALQEAAVGPAAPVRDILSAIPGVSVDRST
MAB_0552c|M.abscessus_ATCC_199      PASKYGIEWYGSAEDICRVHAALQKVAVGPAAPVRDILAAEPGIDLHSEN
                                    *.*  * **:*.* ****:* **:  *:* *:**:.*::  .*: :.   

MLBr_01923|M.leprae_Br4923          WPYIGAKAGGLPGDLTFSWYAVDKTQQSWVVSFQLNWPRDHGPTVTSWML
MAV_0561|M.avium_104                WPYIGAKAGGLPGDLTFSWYAVDKTHQPWVVSFQLNWPRDHGPTATGWML
Mb3624|M.bovis_AF2122/97            WPYIGAKAGGLPGDLTFSWYAVDKTGQPWVVSFQLNWPRDHGPTVTGWML
Rv3593|M.tuberculosis_H37Rv         WPYIGAKAGGLPGDLTFSWYAVDKTGQPWVVSFQLNWPRDHGPTVTGWML
MMAR_5092|M.marinum_M               WPYIGAKAGGLPGDLTFSWYAEDKTGQPWVVSFQLNWPRDHGPNVTGWML
MUL_4168|M.ulcerans_Agy99           WPYIGAKAGGLPGDLTFSWYAEDKTGQPWVVSFQLNWPRDHGPNVTGWML
Mflv_1434|M.gilvum_PYR-GCK          WPYIGAKAGNLPGDMTFSWYAVDRSGQPWVVSLQSNWPEFRSQTAAAWLM
Mvan_5353|M.vanbaalenii_PYR-1       WPYIGAKAGNLPGDLTFSWYAVDASGQPWVVSLQSNWPEFRSQTAAAWLM
MSMEG_6087|M.smegmatis_MC2_155      WTYIGAKGGNLPGDLTFSWYAVDHTGQPWVVSFQLNWPQFRSSTAAGWLL
TH_0594|M.thermoresistible__bu      WTYIAAKGGNLPGDLTFSWYAVDHTGQPWVVSFQLNWPQYRSKTAAGWLL
MAB_0552c|M.abscessus_ATCC_199      WRYIGAKGGNLPGDLTFSWYAEDRTRQPYVVSFQLNWDRAFGPGAAGWVI
                                    * **.**.*.****:****** * : *.:***:* ** .  .  .:.*::

MLBr_01923|M.leprae_Br4923          QLAKQVFALFAPR---
MAV_0561|M.avium_104                QVAKQAFALIAPR---
Mb3624|M.bovis_AF2122/97            QVARQVFALIAPQ---
Rv3593|M.tuberculosis_H37Rv         QVARQVFALIAPQ---
MMAR_5092|M.marinum_M               QVAKQVFALVAPE---
MUL_4168|M.ulcerans_Agy99           QVAKQVFALVAPE---
Mflv_1434|M.gilvum_PYR-GCK          SIARQTFDLIPN----
Mvan_5353|M.vanbaalenii_PYR-1       SIARQTFDLVPNG---
MSMEG_6087|M.smegmatis_MC2_155      QIAKRAFALAPVGRLH
TH_0594|M.thermoresistible__bu      SIVHQAFELIPVG---
MAB_0552c|M.abscessus_ATCC_199      GLAKGVFKKLG-----
                                     :.: .*