For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MVTARALDPRHWRRSTHALLAVAVVLAIAALVLLASLTTGASTAHQLQSADPEPALITPAPGVVPVSDSA PIPTADGLAQALDRALSDPALGMFTGRVTDALTGRELWQQGSTVPMVPASTNKVLTAAAALLTLERDAKL TTSVVADTAGQRGLVTLVGGGDPIVSAAPAGTDTWYRDAARISDLADQVRKSGVAVTSITVDISRFGGPS MAPGWDPADIEGGDVAPIQAVMLDAGRTQPTDYDSRRSTTPALDAGRALAAALGVDPEAVRLDAAPPTAK SIASVQSAPLMERLREMMNASDNVMAETIGREVALATGRAQTFSGTVDAVTSQLRSAGIDLTDLTLRDSS GLSVDDRVTARTLDEVIGAAAGPDKPKLRPLLDVLPIAGGSGTLSERFVTQNQTSAGWLRAKTGSLTGVN TLAGVVTDVSGRVLTFSLMQNHATAPTARNAVDNTAAVLRSCGCS
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. abscessus ATCC 19977 | MAB_0519 | - | - | 100% (465) | peptidase S13 (D-alanyl-D-alanine carboxypeptidase |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3651c | - | 1e-149 | 59.22% (461) | hypothetical protein Mb3651c |
M. gilvum PYR-GCK | Mflv_1409 | - | 1e-149 | 60.52% (461) | D-alanyl-D-alanine |
M. tuberculosis H37Rv | Rv3627c | - | 1e-150 | 59.22% (461) | hypothetical protein Rv3627c |
M. leprae Br4923 | MLBr_00211 | - | 1e-137 | 55.97% (461) | putative carboxypeptidase |
M. marinum M | MMAR_5127 | dacB1 | 1e-150 | 59.87% (461) | D-alanyl-D-alanine carboxypeptidase DacB1 |
M. avium 104 | MAV_0529 | dacB | 1e-141 | 57.74% (452) | D-alanyl-D-alanine |
M. smegmatis MC2 155 | MSMEG_6113 | dacB | 1e-156 | 63.20% (462) | D-alanyl-D-alanine |
M. thermoresistible (build 8) | TH_1412 | - | 2e-75 | 64.56% (237) | CONSERVED HYPOTHETICAL PROTEIN |
M. ulcerans Agy99 | MUL_4203 | dacB1 | 1e-147 | 59.00% (461) | D-alanyl-D-alanine carboxypeptidase DacB1 |
M. vanbaalenii PYR-1 | Mvan_5380 | - | 1e-152 | 60.92% (458) | D-alanyl-D-alanine |
CLUSTAL 2.0.9 multiple sequence alignment MMAR_5127|M.marinum_M --------------------MGPKRWRKSTQVFLGVAVLAFVAAVVAAAA MUL_4203|M.ulcerans_Agy99 --------------------MGPKRWRKSTQVFLGVAVLAFVAAVVAAAA Mb3651c|M.bovis_AF2122/97 --------------------MGPTRWRKSTHVVVGAAVLAFVAVVVAAAA Rv3627c|M.tuberculosis_H37Rv --------------------MGPTRWRKSTHVVVGAAVLAFVAVVVAAAA MLBr_00211|M.leprae_Br4923 --------------------MNPIRWQKS-YVVVGLAMLAFIIAAVKAAT MAV_0529|M.avium_104 -------------------------------MFIGLGVLAFVAAVVVAAT Mflv_1409|M.gilvum_PYR-GCK --------------------MRPTGWRRSTYVVVG-AVVALLVVVLVAAA Mvan_5380|M.vanbaalenii_PYR-1 --------------------MRPTRWRRSTYLVVGVSVLLLVVVVVVAAA TH_1412|M.thermoresistible__bu -------------------------------------------------- MSMEG_6113|M.smegmatis_MC2_155 MSDRLTRRGGSPRSIESRGSMRPTRWRRSTHVAVGVAVLAL-VVAVVAAA MAB_0519|M.abscessus_ATCC_1997 --------------MVTARALDPRHWRRSTHALLAVAVVLAIAALVLLAS MMAR_5127|M.marinum_M FFTVGGRAAS-ARLVVPPPRPPTVKPAVTAVADTGVVPNSGAMAAALAQA MUL_4203|M.ulcerans_Agy99 FFTVGGRAAS-ARLVVPPPRPPTVKPAVTAVADTGVVPNSGAMAAALAQA Mb3651c|M.bovis_AF2122/97 LVTTGGHRAG-VRAPVPPPRPPTVKAGVVPVADTAATPSAAGVTAALAVV Rv3627c|M.tuberculosis_H37Rv LVTTGGHRAG-VRAPAPPPRPPTVKAGVVPVADTAATPSAAGVTAALAVV MLBr_00211|M.leprae_Br4923 VFTTGGHSTNGARSAVPPPRASTVKPALVPVTETAVVPSVGGLAAALASA MAV_0529|M.avium_104 FFTTTGHGAGNAHAPIPAPHAPTVKPGMLPVSDTAELPTGPGVSAALAPV Mflv_1409|M.gilvum_PYR-GCK ALVAGRESDE-NVAVDPVPAPATADPGVIAVSDSADVPTERGLADALRGV Mvan_5380|M.vanbaalenii_PYR-1 ALVATRQPAE-QPAVEAAPAPATAAPGVVPVSDSADKPTPQGLTRALQAV TH_1412|M.thermoresistible__bu -------------------------------------------------- MSMEG_6113|M.smegmatis_MC2_155 ALFTGKHSDA-AEAVPPAPPPATADPGVVPVDLSAPTPTRRGLATALAAA MAB_0519|M.abscessus_ATCC_1997 -LTTGASTAHQLQSADPEPALITPAPGVVPVSDSAPIPTADGLAQALDRA MMAR_5127|M.marinum_M AADPNLGKLGGRVSDALTGQVLWQQLDDVPLVPASTNKVLTATAALLTLD MUL_4203|M.ulcerans_Agy99 AADPNLGKLGGRVSDALTGQVLWQQLDDVPLVPASTSKVLTATAALLTLD Mb3651c|M.bovis_AF2122/97 AVDPDLGKLAGRITDALTGQELWQRLDDVPLVPASTNKILTAAAALLTLD Rv3627c|M.tuberculosis_H37Rv AADPDLGKLAGRITDALTGQELWQRLDDVPLVPASTNKILTAAAALLTLD MLBr_00211|M.leprae_Br4923 LADPSLGSFGGRITDAMTAKELWQQQDDMPLVPASANKLLTAAAALLTLD MAV_0529|M.avium_104 AADPNLGRLGGRITDAITGKELWQVADDMPLVPASTNKVLTAAAALLTLD Mflv_1409|M.gilvum_PYR-GCK AADPNLGRFTGRITDALTGKQLWAQGADVPMQPASTNKLLTAAAALVTLD Mvan_5380|M.vanbaalenii_PYR-1 LANPDLGRFTGRITDARSGDQLWAQGAGVPMQPASTNKMLTAAAALLTLD TH_1412|M.thermoresistible__bu -------------------------------------------------- MSMEG_6113|M.smegmatis_MC2_155 LANPDLGLITGRITDADTGAELWEQGARVPMQPASVNKVLTTAAALLTLD MAB_0519|M.abscessus_ATCC_1997 LSDPALGMFTGRVTDALTGRELWQQGSTVPMVPASTNKVLTAAAALLTLE MMAR_5127|M.marinum_M RQARISTRVVAGSPSGQGPVVLVGAGDPTLSAAPPGVETWYRGAARISDL MUL_4203|M.ulcerans_Agy99 RQARISTRVVAGSPSGQGSVVLVGAGDPTLSAAPPGVETWYRGAARISDL Mb3651c|M.bovis_AF2122/97 RQARISTRVVAGGQNPQGPVVLVGAGDPTLSAAPPGQDTWYHGAARIGDL Rv3627c|M.tuberculosis_H37Rv RQARISTRVVAGGQNPQGPVVLVGAGDPTLSAAPPGQDTWYHGAARIGDL MLBr_00211|M.leprae_Br4923 RQTRISTRVVAAGPNAQGPVVLVGAGDPTLSAASPDQSTWYRGAPRISDL MAV_0529|M.avium_104 RQARISTRVVAGSQNAQGPVVLVGAGDPVLSAAPPGQPTWYRGAARISDL Mflv_1409|M.gilvum_PYR-GCK RDARLTTRVVSTS---PGVIVLVAGGDQTLSAAPAKEDTWYRDAARISDL Mvan_5380|M.vanbaalenii_PYR-1 RDARLTTRVLSAS---PGVVVLVGGGDPTLSAAPRNVDTWYRDAARIVDL TH_1412|M.thermoresistible__bu -------------------------------------------------- MSMEG_6113|M.smegmatis_MC2_155 RDARLTTTVVAADDQ-PGLVVLRGGGDTTLSAAPKGTDTWYKGAARISDL MAB_0519|M.abscessus_ATCC_1997 RDAKLTTSVVADTAGQRGLVTLVGGGDPIVSAAPAGTDTWYRDAARISDL MMAR_5127|M.marinum_M VDQIRRSGMTPTSVQVDISAFTGPTMAPGWDPADVGNGDIAPIEAAMIDA MUL_4203|M.ulcerans_Agy99 VDQIRRSGMTPTSVQVDISAFTGPTMAPGWDPSDVGNGDIAPIEAAMIDA Mb3651c|M.bovis_AF2122/97 VEQIRRSGVTPTAVQVDASAFSGPTMAPGWDPADIDNGDIAPIEAAMIDA Rv3627c|M.tuberculosis_H37Rv VEQIRRSGVTPTAVQVDASAFSGPTMAPGWDPADIDNGDIAPIEAAMIDA MLBr_00211|M.leprae_Br4923 VEQVRRSGVTPTAVQVDTSLFTGPTMAQGWDPADVDNGYTAPIESAMIDA MAV_0529|M.avium_104 VEQIRRSGVTPTAVQVDTSAFSGPTMAQGWDPSDVDNGDIAPIESVMIDA Mflv_1409|M.gilvum_PYR-GCK ADQVRRSGVDVRSVQVDVSFYTGPTMAPGWDPLDIDGGDIAPMEAIMLDG Mvan_5380|M.vanbaalenii_PYR-1 ADQIRRSGVDVKSVQVDVSAYSGPSMAPGWDPLDIDGGDIAPMEAIMLDG TH_1412|M.thermoresistible__bu ---------------------------------------------VMLDG MSMEG_6113|M.smegmatis_MC2_155 ADQVRARGIRVTRVRVDTSAYSGPTMAPGWDPADIDGGDIAPMESVMLDG MAB_0519|M.abscessus_ATCC_1997 ADQVRKSGVAVTSITVDISRFGGPSMAPGWDPADIEGGDVAPIQAVMLDA *:*. MMAR_5127|M.marinum_M GRVQPTTVNSRRSLTPALDAGRELARALGLDPATVSIAS----APAGARQ MUL_4203|M.ulcerans_Agy99 GRVQPTTVNSRRSLTPALDAGCELARALGLDPATVSIAS----APAGARQ Mb3651c|M.bovis_AF2122/97 GRIQPTTVNSRRSRTPALDAGRELAKALGLDPAAVTIAS----APAGARQ Rv3627c|M.tuberculosis_H37Rv GRIQPTTVNSRRSRTPALDAGRELAKALGLDPAAVTIAS----APAGARQ MLBr_00211|M.leprae_Br4923 GRIQPTTVKSRRSRTPALDAGRELAKALGVAPDAVTIVK----ASSGARQ MAV_0529|M.avium_104 GRIQPTTVNSRRTRTPALDAGRELAKALGLDPNAVTVAT----APSGARQ Mflv_1409|M.gilvum_PYR-GCK GRTQPVSVESRRSRTPALDAGRALATALRLDPAKVTVLPPGRSAPDG-DE Mvan_5380|M.vanbaalenii_PYR-1 GRTQPVTVESRRSRTPALDAGRALAVALRVDPAKVTVLP---SAARG-TE TH_1412|M.thermoresistible__bu GRTQPVSEESRRSHTPALDAGRALAAALDVDPATVTVLP---SAYRGGTE MSMEG_6113|M.smegmatis_MC2_155 GRTQPTTVESRRSKSPALDAGKALAAALGVEPESVTLMP---SGMRGGTT MAB_0519|M.abscessus_ATCC_1997 GRTQPTDYDSRRSTTPALDAGRALAAALGVDPEAVRLDA----APPTAKS ** **. .***: :****** ** ** : * * : . MMAR_5127|M.marinum_M LAVVQSAPLIERLSQMMNASDNVMAECIAREVAAAINRPRSFSGAVDAVT MUL_4203|M.ulcerans_Agy99 LAVVQSAPLIERLSQMMNASDNVMAECIAREVAAAINRPRSFSGAVDAVT Mb3651c|M.bovis_AF2122/97 LAVVQSAPLIQRLSQMMNASDNVMAECIGREVAVAINRPQSFSGAVDAVT Rv3627c|M.tuberculosis_H37Rv LAVVQSAPLIQRLSQMMNASDNVMAECIGREVAVAINRPQSFSGAVDAVT MLBr_00211|M.leprae_Br4923 LAVVQSAPLVQRLSEMMDNSDNVLAECIGREVAAAINRPLSFAGAVDAVT MAV_0529|M.avium_104 LAVVQSAPLVQRLSEMMDHSDNVLAECIAREVAAAINRPRSFAGAADAVT Mflv_1409|M.gilvum_PYR-GCK IASVQSAPLMERLRQMMHASDNVMAESIGREVADARNRPRSFAGAAQAVE Mvan_5380|M.vanbaalenii_PYR-1 IASVQSPPLMQRLRDMMNFSDNVMAEAIGREVAAEVGRPQSFDGAARAVL TH_1412|M.thermoresistible__bu IAAVESAPLIERLRVMMYASDNVMAETIGREVAAATGRPQSFAGAVEAVL MSMEG_6113|M.smegmatis_MC2_155 IAEVQSAPLIERLRQMMNESDNVMAESIAREVAEALGRPQSFEGAVGAVL MAB_0519|M.abscessus_ATCC_1997 IASVQSAPLMERLREMMNASDNVMAETIGREVALATGRAQTFSGTVDAVT :* *:*.**::** ** ****:** *.**** .*. :* *:. ** MMAR_5127|M.marinum_M TRLNTAHINTTGAGLVDSSGLSVDDRLTARTLDDAIQAAAGPDQPALRPL MUL_4203|M.ulcerans_Agy99 TRLNTALINTTGAGLVDSSGLSVDDRLTARTLDDAIQAAAGPDQPALRPL Mb3651c|M.bovis_AF2122/97 SRLNTAHIDTAGAALVDSSGLSLDNRLTARTLDATMQAAAGPDQPALRPL Rv3627c|M.tuberculosis_H37Rv SRLNTAHIDTAGAALVDSSGLSLDNRLTARTLDATMQAAAGPDQPALRPL MLBr_00211|M.leprae_Br4923 NRLGTAHIDTTGAALVDSSGLSVNNRLTAKTLGGAVQAAAGPDQPVLRAL MAV_0529|M.avium_104 NRLSTAHVDTAGATLMDSSGLSVDDRLTAKTLDGVLQAAAGPDQPALRAL Mflv_1409|M.gilvum_PYR-GCK DALDDAGIDTSGARLLDSSGLSVDNRLTAETLDEIIQAAAGESTPALRPL Mvan_5380|M.vanbaalenii_PYR-1 STLEDAGIDTAGARLLDSSGLSVDNRLTAETLDEVVQAAAGDSEPALRPL TH_1412|M.thermoresistible__bu DTLGDAGIDIDKAELFDNSGLSVDDRLTADTIDSVLAAAVGDDHAELRPL MSMEG_6113|M.smegmatis_MC2_155 TQLRSVGIDTSGAKLVDSSGLSVDNRLTALTLDEVVNAAAGHTQPALRPL MAB_0519|M.abscessus_ATCC_1997 SQLRSAGIDLTDLTLRDSSGLSVDDRVTARTLDEVIGAAAGPDKPKLRPL * . :: * *.****:::*:** *:. : **.* . **.* MMAR_5127|M.marinum_M LDLLPIAGGSGTLGERFLDRATNLGPAGWLRAKTGSLTAINSLVGVVTDS MUL_4203|M.ulcerans_Agy99 LDLLPIASGSGTLGERFLDRATNLGPAGWLRAKTGSLTAINSLVGVVTDS Mb3651c|M.bovis_AF2122/97 LDLLPIAGGSGTLGERFLDAATDQGPAGWLRAKTGSLTAINSLVGVLTDR Rv3627c|M.tuberculosis_H37Rv LDLLPIAGGSGTLGERFLDAATDQGPAGWLRAKTGSLTAINSLVGVLTDR MLBr_00211|M.leprae_Br4923 LDLLPIAGGSGTLSDRFLSSATHQGPAGWLRAKTGSLTAINSLVGVVTDR MAV_0529|M.avium_104 LDLLPIAAGSGTLGDRFTDASTNQGPAGWLRAKTGSLTAINALAGVLTDR Mflv_1409|M.gilvum_PYR-GCK VDLLAIAGGSGTMSNRYHDTEPGRAALGYLRAKTGSLTGTNTLAGIVTDE Mvan_5380|M.vanbaalenii_PYR-1 VDLLPIAGGSGTLSNRYLDTDDGRAAAGYLRAKTGSLTGTNSLAGIVTDE TH_1412|M.thermoresistible__bu VDMLPVAGGSGTLSYRYHDTAAGRAATGWLRAKTGSLTGTNALAGIVTGV MSMEG_6113|M.smegmatis_MC2_155 VDLLPIAGGSGTLSNRYLDTDAGRAAAGWLRAKTGSLTGTNALAGIVTDR MAB_0519|M.abscessus_ATCC_1997 LDVLPIAGGSGTLSERFVTQN--QTSAGWLRAKTGSLTGVNTLAGVVTDV :*:*.:*.****:. *: . *:*********. *:*.*::*. MMAR_5127|M.marinum_M SGRVLTFAFISNDA-GPNGRNAMDALATTLWSCGCTT MUL_4203|M.ulcerans_Agy99 SGRVLTFAFISNDA-GPNGRNAMDALATTLWSCGCTT Mb3651c|M.bovis_AF2122/97 SGRVLTFAFISNEA-GPNGRNAMDALATKLWFCGCTT Rv3627c|M.tuberculosis_H37Rv SGRVLTFAFISNEA-GPNGRNAMDALATKLWFCGCTT MLBr_00211|M.leprae_Br4923 SGRVLTFAFISNDA-GPTGRAAMDELATRLWMCGCAT MAV_0529|M.avium_104 SGRVLTFAFISNDA-GPNGRNAMDALATRLWFCGCS- Mflv_1409|M.gilvum_PYR-GCK SGRVLTFALLSNDA-GPTGRTSLDAFAATLRSCGCR- Mvan_5380|M.vanbaalenii_PYR-1 SGRVLTFALLSNDA-GPTGRTALDAFAATLRSCGCR- TH_1412|M.thermoresistible__bu SGRVLTFTLISNDA-GPMGRTALDAVAAVLRSCGCRT MSMEG_6113|M.smegmatis_MC2_155 SGRVLTFALISNNA-GPTGRTAIDALAAVLRSCGCGA MAB_0519|M.abscessus_ATCC_1997 SGRVLTFSLMQNHATAPTARNAVDNTAAVLRSCGCS- *******:::.*.* .* .* ::* *: * ***