For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MSRRKRSKGQAGRILGALWMPLVAVIVIAVVGFGVNRIREKSQAISHPPTTRPIPATVVQINPKNVTYEV FGNLGTSGKVSYANLNSEPVDVVLTSLPWSVSETTMSSAASLSLVAQVDGDSLGCRIRVNGEVREEQVVN HTGAAVACTVTAA
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. abscessus ATCC 19977 | MAB_0477 | - | - | 100% (153) | membrane protein MmpS |
M. abscessus ATCC 19977 | MAB_2572c | - | 4e-70 | 97.76% (134) | putative membrane protein, MmpS |
M. abscessus ATCC 19977 | MAB_2649 | - | 2e-24 | 38.26% (149) | MmpS family protein |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0459c | mmpS4 | 2e-24 | 41.43% (140) | membrane protein |
M. gilvum PYR-GCK | Mflv_2704 | - | 5e-19 | 34.33% (134) | membrane family protein |
M. tuberculosis H37Rv | Rv0451c | mmpS4 | 2e-24 | 41.43% (140) | membrane protein |
M. leprae Br4923 | MLBr_02377 | - | 1e-24 | 39.13% (161) | hypothetical protein MLBr_02377 |
M. marinum M | MMAR_3049 | mmpS4_1 | 3e-26 | 43.70% (135) | membrane transporter |
M. avium 104 | MAV_3953 | - | 4e-24 | 40.00% (140) | MmpS2 protein |
M. smegmatis MC2 155 | MSMEG_0380 | - | 3e-22 | 40.44% (136) | MmpS4 protein |
M. thermoresistible (build 8) | TH_3673 | - | 3e-23 | 37.41% (139) | PUTATIVE MmpS4 protein |
M. ulcerans Agy99 | MUL_2293 | mmpS4_1 | 2e-26 | 43.70% (135) | membrane transporter |
M. vanbaalenii PYR-1 | Mvan_3834 | - | 9e-19 | 34.81% (135) | hypothetical protein Mvan_3834 |
CLUSTAL 2.0.9 multiple sequence alignment MSMEG_0380|M.smegmatis_MC2_155 ---------------MRRLWIPLLVIAVVAVGGFTVSRLHNVFGAEKRPS TH_3673|M.thermoresistible__bu ---------------LKRFWIPLLALVVFSSGGFAVSRLHGIFGSEKRPT Mb0459c|M.bovis_AF2122/97 --------------MLMRTWIPLVILVVVIVGGFTVHRIRGFFGSENRPS Rv0451c|M.tuberculosis_H37Rv --------------MLMRTWIPLVILVVVIVGGFTVHRIRGFFGSENRPS MLBr_02377|M.leprae_Br4923 MSKRQRGKGISIFKLLSRIWIPLVILVVLVVGGFVVYRVHSYFASEKRES Mflv_2704|M.gilvum_PYR-GCK ---------------MSRAWIPLVLVIVLLVAGFTVWRLRNMFASHPLPT Mvan_3834|M.vanbaalenii_PYR-1 ---------------MTRAWIPLVLVLVLVVGGLAVWRIRNIFGSHQLPT MMAR_3049|M.marinum_M -----------MFTFLKRAWVPIVVVIAVAIGGTAVDRLRGVFGSDEIFS MUL_2293|M.ulcerans_Agy99 -----------MFTFLKRAWVPIVVVIAVAIGGTAVDRLRGVFGSDEIFS MAB_0477|M.abscessus_ATCC_1997 -MSRRKRSKGQAGRILGALWMPLVAVIVIAVVGFGVNRIREKSQAISHPP MAV_3953|M.avium_104 --------------MLARIWMPLVAVVAVGVGLLCMYKVHQFSE--PEPV : *:*:: : .. : ::: MSMEG_0380|M.smegmatis_MC2_155 YADTKAADSKPFDPKRLTYEVFGPPGTLADISYFDEDSNPQFVEKVSLPW TH_3673|M.thermoresistible__bu YAAALQNEVTTFNPKRLTYEVFGPPGTTASISYFDENTDPQFIENVALPW Mb0459c|M.bovis_AF2122/97 YSDTNLENSKPFNPKHLTYEIFGPPGTVADISYFDVNSEPQRVDGAVLPW Rv0451c|M.tuberculosis_H37Rv YSDTNLENSKPFNPKHLTYEIFGPPGTVADISYFDVNSEPQRVDGAVLPW MLBr_02377|M.leprae_Br4923 YADSNLGSSKPFNPKQIVYEVFGPPGTVADISYFDANSDPQRIDGAQLPW Mflv_2704|M.gilvum_PYR-GCK YAGSMSADTNKSDPKIVRYEIFGVPGATADINYIDDEGDANQIIGAPLPW Mvan_3834|M.vanbaalenii_PYR-1 YAGSMSEDSNKSDPKIVRYEIFGDPGATADINYIDDEGDPNQIVGATLPW MMAR_3049|M.marinum_M STGSSVETIVPFNPKQVTYEVFGPSGTAGSVSYLNKNAEPEEADFSTLPW MUL_2293|M.ulcerans_Agy99 STGSSVETIVPFNPKQVTYEVFGPSGTAGSVSYLNKNAEPEEADFSTLPW MAB_0477|M.abscessus_ATCC_1997 TTRPIPATVVQINPKNVTYEVFGNLGTSGKVSYANLNSEPVDVVLTSLPW MAV_3953|M.avium_104 ITVNGPQAPEQFNLKRITYEVFGSVGQGGKLVYVDIDGHPHQVDITTLPW : : * : **:** * ..: * : : .. *** MSMEG_0380|M.smegmatis_MC2_155 SLHFDIGKTTAVGSIMAQGDSDTIGCRIIVDDEVKAEKVSNQTNAFTSCL TH_3673|M.thermoresistible__bu SLQMEISKTTALGSIMAQGDSNSIGCRIMVDDEVKEEKVSNQVNAFASCL Mb0459c|M.bovis_AF2122/97 SLHITTNDAAVMGNIVAQGNSDSIGCRITVDGKVRAERVSNEVNAYTYCL Rv0451c|M.tuberculosis_H37Rv SLHITTNDAAVMGNIVAQGNSDSIGCRITVDGKVRAERVSNEVNAYTYCL MLBr_02377|M.leprae_Br4923 SLLMTTTLAAVMGNLVAQGNTDSIGCRIIVDGVVKAERVSNEVNAYTYCL Mflv_2704|M.gilvum_PYR-GCK AIEVETDSPAMVGNIVAQGDGDFIGCRILSDGELKDERTIHNYTAYIYCF Mvan_3834|M.vanbaalenii_PYR-1 SIEVETNSPAMVGNVVAQGDSDFIGCRISADGVVKDERTAHNVSAYVYCF MMAR_3049|M.marinum_M TRTITTTIPAIIANIVAQGNSDSIGCRITVNGDVKDEQSAQGHHAQTFCL MUL_2293|M.ulcerans_Agy99 TRTITTTIPAIIANIVAQGNSDSIGCRITVNGDVKDEQSAQGHHAQTFCL MAB_0477|M.abscessus_ATCC_1997 SVSETTMSSAASLSLVAQVDGDSLGCRIRVNGEVREEQVVNHTGAAVACT MAV_3953|M.avium_104 THTESTTLSVASGSISVHVHGGQVGCRMLVNDVVRDEQSGNHQDADVQCR : .. .: .: . . :***: :. :: *: : * * MSMEG_0380|M.smegmatis_MC2_155 LKAA TH_3673|M.thermoresistible__bu LQAA Mb0459c|M.bovis_AF2122/97 VKSA Rv0451c|M.tuberculosis_H37Rv VKSA MLBr_02377|M.leprae_Br4923 VKSA Mflv_2704|M.gilvum_PYR-GCK SKAT Mvan_3834|M.vanbaalenii_PYR-1 TKSA MMAR_3049|M.marinum_M VKAA MUL_2293|M.ulcerans_Agy99 VKAA MAB_0477|M.abscessus_ATCC_1997 VTAA MAV_3953|M.avium_104 VKSA ::