For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
TDDRLAIQDLVARYATAADDRDVDALVALFSADAELVRPPALLRTGDSAVVRGSVTIADSIVAALKPLYA TYHLIGQHTVSIDSDTAAGKVYCMAHHIYLRGKEYRDNTMAVRYLDNYQRGPTGWVFTRREPVVVFSEDR PVRVG*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. abscessus ATCC 19977 | MAB_0367c | - | - | 100% (146) | hypothetical protein MAB_0367c |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2934c | - | 4e-08 | 29.41% (136) | hypothetical protein Mb2934c |
M. gilvum PYR-GCK | Mflv_2379 | - | 3e-08 | 31.06% (132) | hypothetical protein Mflv_2379 |
M. tuberculosis H37Rv | Rv2910c | - | 4e-08 | 29.41% (136) | hypothetical protein Rv2910c |
M. leprae Br4923 | - | - | - | - | - |
M. marinum M | MMAR_1376 | - | 3e-16 | 35.42% (144) | hypothetical protein MMAR_1376 |
M. avium 104 | MAV_2936 | - | 1e-18 | 38.62% (145) | hypothetical protein MAV_2936 |
M. smegmatis MC2 155 | MSMEG_2434 | - | 4e-07 | 28.87% (142) | hypothetical protein MSMEG_2434 |
M. thermoresistible (build 8) | TH_2391 | - | 2e-08 | 30.77% (143) | CONSERVED HYPOTHETICAL PROTEIN |
M. ulcerans Agy99 | MUL_2499 | - | 6e-16 | 35.42% (144) | hypothetical protein MUL_2499 |
M. vanbaalenii PYR-1 | Mvan_3181 | - | 1e-14 | 36.11% (144) | hypothetical protein Mvan_3181 |
CLUSTAL 2.0.9 multiple sequence alignment MMAR_1376|M.marinum_M ---------------------------------MDISTAIPSPELEALSR MUL_2499|M.ulcerans_Agy99 MRPLRRDCCGVRHGPQAWPVLSTASLSRLALACRCISTAISSPELEALSR MAB_0367c|M.abscessus_ATCC_199 -------------------------------------MTDDRLAIQDLVA MAV_2936|M.avium_104 ----------------------------------MTLSADDRGALSDLVH Mvan_3181|M.vanbaalenii_PYR-1 ----------------------------------MTLDVADRLAVSDLVH Mb2934c|M.bovis_AF2122/97 ------------------------MCAVLDRSMLSVAEISDRLEIQQLLV Rv2910c|M.tuberculosis_H37Rv ------------------------MCAVLDRSMLSVAEISDRLEIQQLLV MSMEG_2434|M.smegmatis_MC2_155 --------------------------------MLSLAEISDRLEIQQLLV TH_2391|M.thermoresistible__bu --------------------------------VLSLAEISDRLEIQQLLV Mflv_2379|M.gilvum_PYR-GCK -----------------------------------MTEETDRLEISEVQV :. : MMAR_1376|M.marinum_M RYAAAVDHRDSAALIEVFTPDATMR----IHRPGREPALLTGHSELAGII MUL_2499|M.ulcerans_Agy99 RYAAAVDHRDSAALIEVFTPDATMR----IHRPGREPALLTGHSELAGII MAB_0367c|M.abscessus_ATCC_199 RYATAADDRDVDALVALFSADAELVRPPALLRTGDSAVVRGSVTIADSIV MAV_2936|M.avium_104 RYAAGVDDRRFDAVAELFTVDAELVVP-APPAELRPVHTHRGRAAIAAAA Mvan_3181|M.vanbaalenii_PYR-1 LYASAVDDRRFDDVLELFTETAELRVP-EPPRSLEPTRRHLGRDGVRSAL Mb2934c|M.bovis_AF2122/97 DYSSAIDQRRFDDLDRVFTPDAYIDYR---ALGGIDGRYPKIKQWLSQVL Rv2910c|M.tuberculosis_H37Rv DYSSAIDQRRFDDLDRVFTPDAYIDYR---ALGGIDGRYPKIKQWLSQVL MSMEG_2434|M.smegmatis_MC2_155 DYSTAIDRRQFDDLDAVFTPDAYIDYR---AMGGIDGHYPEVKAWLAEVL TH_2391|M.thermoresistible__bu DYSTAIDRRRFDDLDRVFTEDAYIDYR---AMGGIDGHYPQVKAWLKEVL Mflv_2379|M.gilvum_PYR-GCK RYATGIDSRDWSLFRTVFTEDCELDYG-------EIGVWNGVDAVTDFMV *::. * * . :*: . : MMAR_1376|M.marinum_M TIVARFPRTVHLVAQSLYVIEGKT--ASGEVYCTANHFSE-KQGAWRNHV MUL_2499|M.ulcerans_Agy99 TIVARFPRTVHLVAQSLHVIEGKT--ASGEVYCTANHFSE-EQGAWRNHV MAB_0367c|M.abscessus_ATCC_199 AALKPLYATYHLIGQHTVSIDSDT--AAGKVYCMAHHIYL-RGKEYRDNT MAV_2936|M.avium_104 AAVAAVARTEHAIVGEVYDATAPPGAARGRIACVAHHWSE-RGDELVDVV Mvan_3181|M.vanbaalenii_PYR-1 SALAAVTRTEHAIVGEVYARGDVAGYALGRITCVAHHWTV-AGDSATDVV Mb2934c|M.bovis_AF2122/97 GNFPVYAHMLGNFSVRV----DG-DTASSRVICFNPMVF--AGDRQQVLF Rv2910c|M.tuberculosis_H37Rv GNFPVYAHMLGNFSVRV----DG-DTASSRVICFNPMVF--AGDRQQVLF MSMEG_2434|M.smegmatis_MC2_155 PAFPAYAHMLGNFDVRITYDPDGQDTASSRTICFNPMVL--DGLSPQVLF TH_2391|M.thermoresistible__bu PNFPAYAHLVGNFDISL----DG-DRASSRTLCLNPMALTGDGDERQLLF Mflv_2379|M.gilvum_PYR-GCK AAHDMAGHTLHRITNHTALVNGDS--ATARAYVDALIMAQ---DNASGVN . * .. MMAR_1376|M.marinum_M MYIRYLDRYLLGGDGAWRISHRTVAIDATEDRPVSITEGGA--------- MUL_2499|M.ulcerans_Agy99 MYIRYLDRYLLGGDGAWRISHRTVAIDATEDRPVSITEGGA--------- MAB_0367c|M.abscessus_ATCC_199 MAVRYLDNYQRGPTG-WVFTRREPVVVFSEDRPVRVG------------- MAV_2936|M.avium_104 WHLRYDDSYQPTGDG-WRISRRALTVTAIETHPARRLLPHDPA------- Mvan_3181|M.vanbaalenii_PYR-1 WHLRYDDEYLRTPRG-WRFHGRALTINAIETRPARRVRVPPPAGRAAGAA Mb2934c|M.bovis_AF2122/97 CGLWYDDDFVRTPDG-WRIIRR------VETKCFQKMM------------ Rv2910c|M.tuberculosis_H37Rv CGLWYDDDFVRTPDG-WRIIRR------VETKCFQKMM------------ MSMEG_2434|M.smegmatis_MC2_155 CGLWYDDQFVRTPEG-WRMTRR------VETKCFDKVI------------ TH_2391|M.thermoresistible__bu CGLWYDDEFRRTPEG-WRITRR------VETKCFDKVL------------ Mflv_2379|M.gilvum_PYR-GCK AAGFYDDDLVRTDAG-WRIARRRFTTVLVRTVSAG--------------- * * * * : * . MMAR_1376|M.marinum_M ----------------------- MUL_2499|M.ulcerans_Agy99 ----------------------- MAB_0367c|M.abscessus_ATCC_199 ----------------------- MAV_2936|M.avium_104 ----------------------- Mvan_3181|M.vanbaalenii_PYR-1 PSAASPGPPPGRTRPPGRSPETP Mb2934c|M.bovis_AF2122/97 ----------------------- Rv2910c|M.tuberculosis_H37Rv ----------------------- MSMEG_2434|M.smegmatis_MC2_155 ----------------------- TH_2391|M.thermoresistible__bu ----------------------- Mflv_2379|M.gilvum_PYR-GCK -----------------------