For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
CAVLDRSMLSVAEISDRLEIQQLLVDYSSAIDQRRFDDLDRVFTPDAYIDYRALGGIDGRYPKIKQWLSQ VLGNFPVYAHMLGNFSVRVDGDTASSRVICFNPMVFAGDRQQVLFCGLWYDDDFVRTPDGWRIIRRVETK CFQKMM*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. tuberculosis H37Rv | Rv2910c | - | - | 100% (147) | hypothetical protein Rv2910c |
| M. tuberculosis H37Rv | Rv0310c | - | 8e-08 | 27.87% (122) | hypothetical protein Rv0310c |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb2934c | - | 8e-85 | 100.00% (147) | hypothetical protein Mb2934c |
| M. gilvum PYR-GCK | Mflv_4178 | - | 1e-52 | 65.25% (141) | hypothetical protein Mflv_4178 |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_3230c | - | 1e-45 | 64.84% (128) | hypothetical protein MAB_3230c |
| M. marinum M | MMAR_1798 | - | 3e-56 | 70.80% (137) | hypothetical protein MMAR_1798 |
| M. avium 104 | MAV_3765 | - | 4e-67 | 82.73% (139) | hypothetical protein MAV_3765 |
| M. smegmatis MC2 155 | MSMEG_2434 | - | 1e-60 | 75.69% (144) | hypothetical protein MSMEG_2434 |
| M. thermoresistible (build 8) | TH_2391 | - | 1e-60 | 72.34% (141) | CONSERVED HYPOTHETICAL PROTEIN |
| M. ulcerans Agy99 | MUL_2046 | - | 5e-58 | 70.42% (142) | hypothetical protein MUL_2046 |
| M. vanbaalenii PYR-1 | Mvan_2185 | - | 1e-58 | 68.06% (144) | hypothetical protein Mvan_2185 |
CLUSTAL 2.0.9 multiple sequence alignment
Rv2910c|M.tuberculosis_H37Rv -----MCAVLDRSMLSVAEISDRLEIQQLLVDYSSAIDQRRFDDLDRVFT
Mb2934c|M.bovis_AF2122/97 -----MCAVLDRSMLSVAEISDRLEIQQLLVDYSSAIDQRRFDDLDRVFT
MAV_3765|M.avium_104 -------------MLSLEEISDRLEIQQLLVDYSTAIDNRRFDDLDDVFT
Mflv_4178|M.gilvum_PYR-GCK -------------MMTLEEISDRLEIQQLLIDYSTAIDAKRFDDLDSVFT
Mvan_2185|M.vanbaalenii_PYR-1 MSLNRAAVVFNRAMLSLAEISDRLEIQQLLIDYSSAIDGRRFDDLDAVFT
MMAR_1798|M.marinum_M -------------MLSLPEISDRLEIQQLLVDYSTAIDLRRFDDLDKVFT
MUL_2046|M.ulcerans_Agy99 --------MLNRIMLSLPEISDRLEIQQLLVDYSTAIDLRRFDDLDKVFT
TH_2391|M.thermoresistible__bu -------------VLSLAEISDRLEIQQLLVDYSTAIDRRRFDDLDRVFT
MSMEG_2434|M.smegmatis_MC2_155 -------------MLSLAEISDRLEIQQLLVDYSTAIDRRQFDDLDAVFT
MAB_3230c|M.abscessus_ATCC_199 -----------------------------MVDYATAIDTRQFDDLDEVFT
::**::*** ::***** ***
Rv2910c|M.tuberculosis_H37Rv PDAYIDYRALGGIDGRYPKIKQWLSQVLGNFPVYAHMLGNFSVRVD----
Mb2934c|M.bovis_AF2122/97 PDAYIDYRALGGIDGRYPKIKQWLSQVLGNFPVYAHMLGNFSVRVD----
MAV_3765|M.avium_104 PDAYIDYTALGGIEGRYPEVKKWLAEVLPNFPVYAHMLGNFSVRID----
Mflv_4178|M.gilvum_PYR-GCK ADAYIDYRVSGGVDGRFPDVKAWLAEVLPNFPAYYHMLGNVDVRLGSD--
Mvan_2185|M.vanbaalenii_PYR-1 PDAYIDYRVSGGVDGRFPEVKAWLKEVLPNFPAYYHLVGNVDIRIS----
MMAR_1798|M.marinum_M PDAYIDYRAMGGIDGQYPHVKAWLADVLPNFANYAHMLGLPSIRLA----
MUL_2046|M.ulcerans_Agy99 PDAYIDYRAMGGIDGQYPHVKAWLAEVLPNFANYAHMLGLPSIRLA----
TH_2391|M.thermoresistible__bu EDAYIDYRAMGGIDGHYPQVKAWLKEVLPNFPAYAHLVGNFDISLD----
MSMEG_2434|M.smegmatis_MC2_155 PDAYIDYRAMGGIDGHYPEVKAWLAEVLPAFPAYAHMLGNFDVRITYDPD
MAB_3230c|M.abscessus_ATCC_199 NDAYIDYRAMGGIDGEYPDVKAWLAQVLPAFPMYAHMLGNVSITFDSEGG
****** . **::*.:*.:* ** :** *. * *::* .: .
Rv2910c|M.tuberculosis_H37Rv --GDTASSRVICFNPMVFAGD--RQQVLFCGLWYDDDFVRTPDGWRIIRR
Mb2934c|M.bovis_AF2122/97 --GDTASSRVICFNPMVFAGD--RQQVLFCGLWYDDDFVRTPDGWRIIRR
MAV_3765|M.avium_104 --GDTASSRVICFNPMVLGGD--TDQVLFCGLWYDDEFVRTPGGWRMTRR
Mflv_4178|M.gilvum_PYR-GCK --GNTATSRAICFNPMVMGGD--AGQIYFVGIWYVDEFVRTEQGWRMSRR
Mvan_2185|M.vanbaalenii_PYR-1 --GDTATSRAICFNPMVMGGE--HNQVYFVGIWYVDEFVRTAQGWRMSRR
MMAR_1798|M.marinum_M --GDTATARTFCFNPMVFAGE--KPTTMLLGLWYDDEFVRTAEGWRMSRR
MUL_2046|M.ulcerans_Agy99 --GDTATARTFCFNPMVFAGE--KPTTMLLGLWYDDEFVRTAEGWRMSRR
TH_2391|M.thermoresistible__bu --GDRASSRTLCLNPMALTGDGDERQLLFCGLWYDDEFRRTPEGWRITRR
MSMEG_2434|M.smegmatis_MC2_155 G-QDTASSRTICFNPMVLDGL--SPQVLFCGLWYDDQFVRTPEGWRMTRR
MAB_3230c|M.abscessus_ATCC_199 AERSSAQVRSLCFNPMVPAGD--TEQVLFLGLWYDDAAVRTRHGWRLTRR
. * * :*:***. * : *:** * ** ***: **
Rv2910c|M.tuberculosis_H37Rv VETKCFQKMM
Mb2934c|M.bovis_AF2122/97 VETKCFQKMM
MAV_3765|M.avium_104 VETKVFQKVM
Mflv_4178|M.gilvum_PYR-GCK VEEKAFDKLV
Mvan_2185|M.vanbaalenii_PYR-1 VEEKCFDKLV
MMAR_1798|M.marinum_M AETKCFDRRP
MUL_2046|M.ulcerans_Agy99 AETKCFDRRP
TH_2391|M.thermoresistible__bu VETKCFDKVL
MSMEG_2434|M.smegmatis_MC2_155 VETKCFDKVI
MAB_3230c|M.abscessus_ATCC_199 VETKCFSRLT
.* * *.: